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The map label for this gene is ypjD [C]

Identifier: 83720443

GI number: 83720443

Start: 1296103

End: 1297002

Strand: Direct

Name: ypjD [C]

Synonym: BTH_I1150

Alternate gene names: 83720443

Gene position: 1296103-1297002 (Clockwise)

Preceding gene: 83721415

Following gene: 83718688

Centisome position: 34.03

GC content: 69.78

Gene sequence:

>900_bases
ATGGATATTGTACTGTATGCCCTCACCGCGCTCCTGTACGGCGGCCTTGCCGTCGCCGGCTGGCGCGCGCGCCGCGTCGG
CGCGGCGCGTCCGCTCGTCGCGAGCGTGCCGGCCGCTCCGTGCGCGCGCGAATCCGCTTCGGGCGGGATGGGCGGGCTCG
GGCGCACGGTTCTCGGCGTCGCGCTGCTCGCGCATGGAGTGCTGCTGCACATGACGATCTTCCCGCACGACGCGATGGTG
TTCGGCTTCGCGTTCGCGCTGTCGGCGATGTTCTGGCTCGGCGCCGGCATCTACTGGATCGAGAGCTTCTTTTTCCCGCT
CGACGGGATGGGGCTTCTCGTGCTGCCGCTCGCGGGCGTCGCGTCGCTCCTGCCGCTCGCGTTCGGCGGCGTGCGCGTGT
TGCCGTATGCGGCGGCGCCGCTTTTCAAGGTGCACTTCCTGATCGCGAACATCGCGTACGGACTCTTTGCGATCGCGGCG
CTGCACGCGGTGCTGATGCTGATGGTCGAGCGGCGCCTGCACGCGCTGCGGCACGACGGGTCGCGCGACTCGTCGGGCTG
GGTTGCCGGCTGGCTCGATACGCTGCCGCCGCTCCTCACGCTCGAGAAGCTGCTGTTCCGCCTGATCGGCGCGGGCTTCG
TGCTGCTCACGCTGACGCTCGCCACGGGCATCCTGTTCAGCGAGCAGATCGACGCGCGCGCGCTCAAGCTCGATCACAAG
ACCGTGTTCGCGATCCTGTCCTGGCTGATGTTCGGCGGGCTCCTCGTCGCGCACAAGGCGTCCGGCTGGCGCGGCCGCGG
CGCGGCGCGCTGGGTGCTCGCGTCGTTCGTCGCGCTGCTGCTCGCGTACGTCGGCAGCCGTTTCGTTCTCGAGGTGCTGC
TGCACCGTTCCGTGGTTTGA

Upstream 100 bases:

>100_bases
GATTGTCGAGCATGGGGAGCGATGGACAGTGAAGCCCGCAGGCGCGAGTGGGACAAAAAGCCGACCGTCGCGGGTAGGGG
GCCTAGTGTAAACTTCGAAC

Downstream 100 bases:

>100_bases
ACACCTGATCTCGATGCGACAAATCCTTCTTCTCATCGTGCTGTTCTTCGCGAGCTCGTGGGTCGCGAGAAAGATTCGCC
AGGCGCAGGCGCGCGGCGAC

Product: cytochrome C assembly family protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MDIVLYALTALLYGGLAVAGWRARRVGAARPLVASVPAAPCARESASGGMGGLGRTVLGVALLAHGVLLHMTIFPHDAMV
FGFAFALSAMFWLGAGIYWIESFFFPLDGMGLLVLPLAGVASLLPLAFGGVRVLPYAAAPLFKVHFLIANIAYGLFAIAA
LHAVLMLMVERRLHALRHDGSRDSSGWVAGWLDTLPPLLTLEKLLFRLIGAGFVLLTLTLATGILFSEQIDARALKLDHK
TVFAILSWLMFGGLLVAHKASGWRGRGAARWVLASFVALLLAYVGSRFVLEVLLHRSVV

Sequences:

>Translated_299_residues
MDIVLYALTALLYGGLAVAGWRARRVGAARPLVASVPAAPCARESASGGMGGLGRTVLGVALLAHGVLLHMTIFPHDAMV
FGFAFALSAMFWLGAGIYWIESFFFPLDGMGLLVLPLAGVASLLPLAFGGVRVLPYAAAPLFKVHFLIANIAYGLFAIAA
LHAVLMLMVERRLHALRHDGSRDSSGWVAGWLDTLPPLLTLEKLLFRLIGAGFVLLTLTLATGILFSEQIDARALKLDHK
TVFAILSWLMFGGLLVAHKASGWRGRGAARWVLASFVALLLAYVGSRFVLEVLLHRSVV
>Mature_299_residues
MDIVLYALTALLYGGLAVAGWRARRVGAARPLVASVPAAPCARESASGGMGGLGRTVLGVALLAHGVLLHMTIFPHDAMV
FGFAFALSAMFWLGAGIYWIESFFFPLDGMGLLVLPLAGVASLLPLAFGGVRVLPYAAAPLFKVHFLIANIAYGLFAIAA
LHAVLMLMVERRLHALRHDGSRDSSGWVAGWLDTLPPLLTLEKLLFRLIGAGFVLLTLTLATGILFSEQIDARALKLDHK
TVFAILSWLMFGGLLVAHKASGWRGRGAARWVLASFVALLLAYVGSRFVLEVLLHRSVV

Specific function: Unknown

COG id: COG4137

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 32009; Mature: 32009

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIVLYALTALLYGGLAVAGWRARRVGAARPLVASVPAAPCARESASGGMGGLGRTVLGV
CHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
ALLAHGVLLHMTIFPHDAMVFGFAFALSAMFWLGAGIYWIESFFFPLDGMGLLVLPLAGV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ASLLPLAFGGVRVLPYAAAPLFKVHFLIANIAYGLFAIAALHAVLMLMVERRLHALRHDG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SRDSSGWVAGWLDTLPPLLTLEKLLFRLIGAGFVLLTLTLATGILFSEQIDARALKLDHK
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVFAILSWLMFGGLLVAHKASGWRGRGAARWVLASFVALLLAYVGSRFVLEVLLHRSVV
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDIVLYALTALLYGGLAVAGWRARRVGAARPLVASVPAAPCARESASGGMGGLGRTVLGV
CHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
ALLAHGVLLHMTIFPHDAMVFGFAFALSAMFWLGAGIYWIESFFFPLDGMGLLVLPLAGV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ASLLPLAFGGVRVLPYAAAPLFKVHFLIANIAYGLFAIAALHAVLMLMVERRLHALRHDG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SRDSSGWVAGWLDTLPPLLTLEKLLFRLIGAGFVLLTLTLATGILFSEQIDARALKLDHK
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVFAILSWLMFGGLLVAHKASGWRGRGAARWVLASFVALLLAYVGSRFVLEVLLHRSVV
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7553451 [H]