Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is 83720317
Identifier: 83720317
GI number: 83720317
Start: 1390770
End: 1391912
Strand: Reverse
Name: 83720317
Synonym: BTH_I1245
Alternate gene names: NA
Gene position: 1391912-1390770 (Counterclockwise)
Preceding gene: 83718498
Following gene: 83719020
Centisome position: 36.54
GC content: 69.29
Gene sequence:
>1143_bases ATGCCGCATCCGATCTTCCGCCTCGCCGCCGCGTTCCCGCTTGCCGTCGCGCTCGCCGCCTGCGGCGGCGACGGCGCCGC GCCCGTTTCCCCGCTTGCAGCCGTCGATGCCGGCAGCGCCGGCGCCGCGCCGGGCAATACGGCGAATGCCGGATCGAGCG CCGGCACCCCGTCGCCCACAACGCCCGCCTCCACGCCGGGCAAATGGAAAAACACGCGCACGGGCGACATGCTCGACGTC GCGCTCGGCGAGTTGCGTCCGACGCAAGGCGCGCTCGGCTACGACCAGATCTACTACAAGCTCGGCCGCTACGAGCGGCA GCCCGACAAGAAGTTCGACGATTTCTGCGCGGACGAAGGGCTCGGCGGCATCGCGCCGGACGGCTACACCGCGCAATCGA CGCTGCGCGACGCGGCGAGCTACGCGTGCGCGACGAGCGCCGACGCACGCGATCGCACGGTGCTCAATCCCGTCGTGATC GGGCCGAACGGCGACACGCTGTACGTGACGGACGGCCACCACGGGCTATCGACCTACTACGAGACGCCTGACGGCGGTGC GGCGTTGCGCGTGCACGTGGTCGTCAAGGACAATCTCGGCGACTACTCGGGCGCGGCGTTCTGGCAGCAGATGCAACGCC GCAGCTACACGCGCCTGAAGGACGGAGACGGCCGGCCGATCGCGCCGGACCAGTTGCCCGCCGGCCTCGGCCTGAAGCTC GGCATGCAGGACGACCGCTACCGGTCGCTCGTCTATTTCACGCGCGACATCGGCTACGCGAAGCCCGCGCAAGCAACCGA CTATCTCGAGTTCTACTGGGCCGACTGGCTGCGGCAGCAGCCGGAGACGTTCTCGCTCGCCGGCTACGACCTCGCGCGCG CAGGCGCGACCGATCCCGATCCGGCTAACGCCGATACCGGCTATCTGAATGCGGTGTGGAACGCGTCGGCGCGGATGGTC GCCTCGACCGATCCGGTGATCGACGGCAAGACGGGCGCCGATCTCGGCCGCGCCGACCAGATCAACGGCGGCAAGAAATA CAGCAAGGGGGAATTCGACAAGCTGCGCCAGCCGATCACGGCCGACAAGCCGGGCAAGATCGCGTACGCGCTCGATTACA GGTCGCGCCACGGGCTGCGCTGA
Upstream 100 bases:
>100_bases AAATAGCTGTCACATCGATTCGCGATGCTGACGCTTCCTCGCTCGTGCGTCGATCGCACGCCGCCAACCCCGGCCAACCC GTCGTCGATCCCCATCGCTC
Downstream 100 bases:
>100_bases CGCGCGGCGCCCGCCGTGGCCGCGGCGGCCACGCGCCCCGACGAGCCCGCCCGCCCATCGGCCGCGCTCACGCCCGCACG CGCCAGCCTCGCGACGACGC
Product: lipoprotein
Products: NA
Alternate protein names: ParB-Like Nuclease Family Protein; ParB-Like Nuclease
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MPHPIFRLAAAFPLAVALAACGGDGAAPVSPLAAVDAGSAGAAPGNTANAGSSAGTPSPTTPASTPGKWKNTRTGDMLDV ALGELRPTQGALGYDQIYYKLGRYERQPDKKFDDFCADEGLGGIAPDGYTAQSTLRDAASYACATSADARDRTVLNPVVI GPNGDTLYVTDGHHGLSTYYETPDGGAALRVHVVVKDNLGDYSGAAFWQQMQRRSYTRLKDGDGRPIAPDQLPAGLGLKL GMQDDRYRSLVYFTRDIGYAKPAQATDYLEFYWADWLRQQPETFSLAGYDLARAGATDPDPANADTGYLNAVWNASARMV ASTDPVIDGKTGADLGRADQINGGKKYSKGEFDKLRQPITADKPGKIAYALDYRSRHGLR
Sequences:
>Translated_380_residues MPHPIFRLAAAFPLAVALAACGGDGAAPVSPLAAVDAGSAGAAPGNTANAGSSAGTPSPTTPASTPGKWKNTRTGDMLDV ALGELRPTQGALGYDQIYYKLGRYERQPDKKFDDFCADEGLGGIAPDGYTAQSTLRDAASYACATSADARDRTVLNPVVI GPNGDTLYVTDGHHGLSTYYETPDGGAALRVHVVVKDNLGDYSGAAFWQQMQRRSYTRLKDGDGRPIAPDQLPAGLGLKL GMQDDRYRSLVYFTRDIGYAKPAQATDYLEFYWADWLRQQPETFSLAGYDLARAGATDPDPANADTGYLNAVWNASARMV ASTDPVIDGKTGADLGRADQINGGKKYSKGEFDKLRQPITADKPGKIAYALDYRSRHGLR >Mature_379_residues PHPIFRLAAAFPLAVALAACGGDGAAPVSPLAAVDAGSAGAAPGNTANAGSSAGTPSPTTPASTPGKWKNTRTGDMLDVA LGELRPTQGALGYDQIYYKLGRYERQPDKKFDDFCADEGLGGIAPDGYTAQSTLRDAASYACATSADARDRTVLNPVVIG PNGDTLYVTDGHHGLSTYYETPDGGAALRVHVVVKDNLGDYSGAAFWQQMQRRSYTRLKDGDGRPIAPDQLPAGLGLKLG MQDDRYRSLVYFTRDIGYAKPAQATDYLEFYWADWLRQQPETFSLAGYDLARAGATDPDPANADTGYLNAVWNASARMVA STDPVIDGKTGADLGRADQINGGKKYSKGEFDKLRQPITADKPGKIAYALDYRSRHGLR
Specific function: Unknown
COG id: COG4318
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40456; Mature: 40325
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHPIFRLAAAFPLAVALAACGGDGAAPVSPLAAVDAGSAGAAPGNTANAGSSAGTPSPT CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC TPASTPGKWKNTRTGDMLDVALGELRPTQGALGYDQIYYKLGRYERQPDKKFDDFCADEG CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCC LGGIAPDGYTAQSTLRDAASYACATSADARDRTVLNPVVIGPNGDTLYVTDGHHGLSTYY CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCEEECCCCCEEEEECCCCCCCCEE ETPDGGAALRVHVVVKDNLGDYSGAAFWQQMQRRSYTRLKDGDGRPIAPDQLPAGLGLKL ECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE GMQDDRYRSLVYFTRDIGYAKPAQATDYLEFYWADWLRQQPETFSLAGYDLARAGATDPD CCCCCHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCCCC PANADTGYLNAVWNASARMVASTDPVIDGKTGADLGRADQINGGKKYSKGEFDKLRQPIT CCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC ADKPGKIAYALDYRSRHGLR CCCCCCEEEEEECCCCCCCC >Mature Secondary Structure PHPIFRLAAAFPLAVALAACGGDGAAPVSPLAAVDAGSAGAAPGNTANAGSSAGTPSPT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC TPASTPGKWKNTRTGDMLDVALGELRPTQGALGYDQIYYKLGRYERQPDKKFDDFCADEG CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCC LGGIAPDGYTAQSTLRDAASYACATSADARDRTVLNPVVIGPNGDTLYVTDGHHGLSTYY CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCEEECCCCCEEEEECCCCCCCCEE ETPDGGAALRVHVVVKDNLGDYSGAAFWQQMQRRSYTRLKDGDGRPIAPDQLPAGLGLKL ECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE GMQDDRYRSLVYFTRDIGYAKPAQATDYLEFYWADWLRQQPETFSLAGYDLARAGATDPD CCCCCHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCCCC PANADTGYLNAVWNASARMVASTDPVIDGKTGADLGRADQINGGKKYSKGEFDKLRQPIT CCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC ADKPGKIAYALDYRSRHGLR CCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA