| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is mraW [H]
Identifier: 83720235
GI number: 83720235
Start: 1252818
End: 1253759
Strand: Direct
Name: mraW [H]
Synonym: BTH_I1110
Alternate gene names: 83720235
Gene position: 1252818-1253759 (Clockwise)
Preceding gene: 83720857
Following gene: 83720953
Centisome position: 32.89
GC content: 65.39
Gene sequence:
>942_bases ATGGGAAACGAATTGCAGCATCGCACGGTGCTGTTGGATGAGGCGGTCGATGCGCTCGTGACGCGGCCCGACGGCGTGTA TGTCGACGGCACGTTCGGGCGCGGCGGTCATAGCCGCGCGGTGCTCGCGCGCTTGAGCGATGCGGGGCGTCTGATCGCAT TCGACAAGGATCCGCGCGCGATCGAGACGGCGAGCGGCATCGAGGACGCGCGCTTCGAGATCGTCCACGACAGCTTCGCG GCGATGAAGGGTGCGCTCGACGCGCGTGGGGTAGGGCGGGTATCGGGCGTGCTGCTGGATCTGGGCGTGTCGTCGCCGCA GGTGGACGACCCGGAGCGCGGCTTCAGCTTTCGCGCGAACGGGCCGCTCGACATGCGGATGGACCCGACGCGCGGCGAAT CGGCGGCCGAGTGGCTTGCGCGGGCGTCGGTGCAGGAATTGACGGAGGTGATACGAGATTATGGGGAAGAACGGTTTGCT TTTCAGATTGCAAAGGCGATTGTTGCTCGCCGGGCAGAGTCCGACCGTCTCGGGCCTCTCGACAGCACGGGCGAGCTTGC CCAAATCGTGGGTCACGTCGTCAAGACCCGTGAGAAGGGCAAGGATCCGGCAACCCGCACCTTTCAAGCTATACGGATTC ACGTCAATCAAGAGCTTGCGGACCTGCAAGTCGTTCTAGAGGCAGCACTGTCGTTGTTGGAGCAAGGGGGGCGGCTGGTG GTCATCAGCTTTCATTCGCTCGAGGACCGGATCGTCAAGCGATTCCTGCAGACGCACGCAAGCGCGCCTGCGGTCGACCG CCGACTGCCGATCCGCGCGGTCGACCTGCCCAGCCCGCCGCTCAAGCTGCTTGGACGCATGTTTCCGAGCGACGCAGAAG TCGCGGCCAATCCGCGTGCCCGTTCGGCGGTGATGCGCATCGCGGAGCGCGTCGCGCCATGA
Upstream 100 bases:
>100_bases CGCAGACCTACACCGCGAAGGAGCAGGCGGCGATGGCGCAGGGCATGCCCGAAGCGCTGAAGAATTTCACGTTCTGATTG CGGTGAGGAAGACGCCCGCG
Downstream 100 bases:
>100_bases GCCGCCTCAATATCTTCCTGCTGATCATCGTGATGGGATGCGCGTTGTCGGTCGTCAATTCGACGAACCAGCAGCGGCAG ATCTTCATTCAATTGCAGCG
Product: S-adenosyl-methyltransferase MraW
Products: NA
Alternate protein names: 16S rRNA m(4)C1402 methyltransferase; rRNA (cytosine-N(4)-)-methyltransferase RsmH [H]
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MGNELQHRTVLLDEAVDALVTRPDGVYVDGTFGRGGHSRAVLARLSDAGRLIAFDKDPRAIETASGIEDARFEIVHDSFA AMKGALDARGVGRVSGVLLDLGVSSPQVDDPERGFSFRANGPLDMRMDPTRGESAAEWLARASVQELTEVIRDYGEERFA FQIAKAIVARRAESDRLGPLDSTGELAQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSLLEQGGRLV VISFHSLEDRIVKRFLQTHASAPAVDRRLPIRAVDLPSPPLKLLGRMFPSDAEVAANPRARSAVMRIAERVAP
Sequences:
>Translated_313_residues MGNELQHRTVLLDEAVDALVTRPDGVYVDGTFGRGGHSRAVLARLSDAGRLIAFDKDPRAIETASGIEDARFEIVHDSFA AMKGALDARGVGRVSGVLLDLGVSSPQVDDPERGFSFRANGPLDMRMDPTRGESAAEWLARASVQELTEVIRDYGEERFA FQIAKAIVARRAESDRLGPLDSTGELAQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSLLEQGGRLV VISFHSLEDRIVKRFLQTHASAPAVDRRLPIRAVDLPSPPLKLLGRMFPSDAEVAANPRARSAVMRIAERVAP >Mature_312_residues GNELQHRTVLLDEAVDALVTRPDGVYVDGTFGRGGHSRAVLARLSDAGRLIAFDKDPRAIETASGIEDARFEIVHDSFAA MKGALDARGVGRVSGVLLDLGVSSPQVDDPERGFSFRANGPLDMRMDPTRGESAAEWLARASVQELTEVIRDYGEERFAF QIAKAIVARRAESDRLGPLDSTGELAQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSLLEQGGRLVV ISFHSLEDRIVKRFLQTHASAPAVDRRLPIRAVDLPSPPLKLLGRMFPSDAEVAANPRARSAVMRIAERVAP
Specific function: Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA [H]
COG id: COG0275
COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. RsmH family [H]
Homologues:
Organism=Homo sapiens, GI165377209, Length=338, Percent_Identity=38.7573964497041, Blast_Score=182, Evalue=3e-46, Organism=Homo sapiens, GI165377202, Length=198, Percent_Identity=39.8989898989899, Blast_Score=121, Evalue=6e-28, Organism=Escherichia coli, GI1786270, Length=315, Percent_Identity=53.6507936507937, Blast_Score=332, Evalue=3e-92, Organism=Drosophila melanogaster, GI62472493, Length=331, Percent_Identity=37.1601208459215, Blast_Score=167, Evalue=8e-42, Organism=Drosophila melanogaster, GI28571637, Length=331, Percent_Identity=37.1601208459215, Blast_Score=167, Evalue=8e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002903 [H]
Pfam domain/function: PF01795 Methyltransf_5 [H]
EC number: NA
Molecular weight: Translated: 34091; Mature: 33960
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNELQHRTVLLDEAVDALVTRPDGVYVDGTFGRGGHSRAVLARLSDAGRLIAFDKDPRA CCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCCCEEEECCCCCH IETASGIEDARFEIVHDSFAAMKGALDARGVGRVSGVLLDLGVSSPQVDDPERGFSFRAN HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEECCCCCCCCCCCCCCCEEECC GPLDMRMDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKAIVARRAESDRLGPL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCC DSTGELAQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSLLEQGGRLV CCCHHHHHHHHHHHHHHHCCCCHHHHHEEHHEEECCHHHHHHHHHHHHHHHHHHCCCCEE VISFHSLEDRIVKRFLQTHASAPAVDRRLPIRAVDLPSPPLKLLGRMFPSDAEVAANPRA EEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCHH RSAVMRIAERVAP HHHHHHHHHHHCC >Mature Secondary Structure GNELQHRTVLLDEAVDALVTRPDGVYVDGTFGRGGHSRAVLARLSDAGRLIAFDKDPRA CCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCCCEEEECCCCCH IETASGIEDARFEIVHDSFAAMKGALDARGVGRVSGVLLDLGVSSPQVDDPERGFSFRAN HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEECCCCCCCCCCCCCCCEEECC GPLDMRMDPTRGESAAEWLARASVQELTEVIRDYGEERFAFQIAKAIVARRAESDRLGPL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCC DSTGELAQIVGHVVKTREKGKDPATRTFQAIRIHVNQELADLQVVLEAALSLLEQGGRLV CCCHHHHHHHHHHHHHHHCCCCHHHHHEEHHEEECCHHHHHHHHHHHHHHHHHHCCCCEE VISFHSLEDRIVKRFLQTHASAPAVDRRLPIRAVDLPSPPLKLLGRMFPSDAEVAANPRA EEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCHH RSAVMRIAERVAP HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA