Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is groEL [H]
Identifier: 83720226
GI number: 83720226
Start: 1653696
End: 1655336
Strand: Direct
Name: groEL [H]
Synonym: BTH_I1458
Alternate gene names: 83720226
Gene position: 1653696-1655336 (Clockwise)
Preceding gene: 83719093
Following gene: 83718531
Centisome position: 43.41
GC content: 63.19
Gene sequence:
>1641_bases ATGGCAGCTAAAGACGTCGTATTCGGCGATTCCGCACGCGCGAAGATGGTCGAAGGCGTGAACATTCTCGCCAACGCTGT GAAGGTCACGCTGGGTCCGAAGGGCCGCAACGTGGTGCTCGAGCGCAGCTTCGGCGGCCCGACGGTCACCAAGGACGGTG TGTCGGTCGCGAAGGAAATCGAGCTGAAGGACAAGCTCCAGAACATGGGTGCGCAAATGGTCAAGGAAGTCGCTTCCAAG ACCAGCGACAACGCAGGCGACGGCACGACGACGGCAACCGTCCTCGCGCAATCGATCGTCCGCGAAGGCATGAAGTACGT CGCATCGGGCATGAACCCGATGGACCTGAAGCGCGGCATCGACAAGGCAGTCGCAGCGGCTGTCGAAGAGCTGAAGAAGA TCAGCAAGCCGTGCACGACGAACAAGGAAATCGCACAGGTCGGCTCGATCTCGGCGAACAGCGATTCGTCGATCGGCGAT CGCATCGCTGAAGCGATGGACAAGGTCGGCAAGGAAGGCGTGATCACCGTCGAAGACGGCAAGTCGCTCGCCGACGAGCT CGACGTCGTCGAAGGCATGCAATTCGACCGCGGCTACCTGTCGCCGTACTTCATCAACAACCCGGACAAGCAAGTCGCCG TCCTCGAGAACCCGTTCGTGCTGCTGCACGACAAGAAGGTGTCGAACATCCGCGATCTGCTGCCGGTGCTCGAGCAAGTC GCGAAGGCTGGCCGTCCGCTGCTCATCATCGCTGAAGACGTCGAAGGCGAAGCGCTCGCGACGCTGGTCGTCAACAACAT CCGCGGCATCCTGAAGACCGTTGCGGTCAAGGCGCCGGGCTTCGGCGACCGTCGCAAGGCGATGCTGGAAGACATCGCGA TCCTGACGGGCGGCCAAGTCATTGCGGAAGAAACCGGCCTCACGCTCGAGAAGGCAACGCTGGCAGAACTGGGCCAGGCG AAGCGCATCGAAGTGGGCAAGGAAAACACGACGATCATCGACGGCGCTGGCGAAGCCGTGAACATCGAAGCGCGCGTCAA GCAAATCCGCACGCAGATCGAAGAAGCGACGTCGGACTACGACCGTGAAAAGCTGCAAGAGCGCGTGGCCAAGCTGGCCG GCGGTGTTGCAGTGATCAAGGTCGGCGCGGCGACCGAAGTCGAAATGAAGGAAAAGAAGGCACGTGTCGAAGACGCGCTG CACGCAACCCGCGCGGCCGTTGAAGAAGGCATCGTCCCGGGCGGCGGTGTCGCGCTGATCCGCGCACGCACCGCAATCGC TGCACTGACCGGCGTGAACGCCGACCAGAACGCCGGCATCAAGATCGTGCTGCGCGCAATGGAAGAGCCGCTGCGCCAGA TCGTCACGAACGGCGGCGAAGAAGCGAGCGTCGTGGTGGCGGCAGTTGCTGCAGGCAAGGGCAACTACGGCTACAACGCG GCGACGGGCGAGTACGTCGACATGGTTGAGGCCGGCGTCGTCGATCCGACGAAGGTCACGCGCACCGCGCTGCAGAACGC GGCTTCGGTCGCAGGCCTGCTGCTGACGACGGACGCAGCCGTCGCCGAACTGCCGAAGGAAGACGCTCCGATGCCGGGCG GCATGCCGGGCGGCATGGGCGGCATGGGCATGGACATGTAA
Upstream 100 bases:
>100_bases AACTGCTCGTAATGCGCGAAGAAGACATCATGGCCGTGGTCAACGCTCAGTAAGCGTTCACCAACGGATCACAATCTCAG AGATTTCAAGGAGTTAGAAG
Downstream 100 bases:
>100_bases TCGGCTAGACGCCGATTGCATCGAAGGACGCGCGGCGACGCGCGTTCTCCCAAACGAAAACACCCGCAGCGCTGCGGGTG TTTTCGTTTGGGGCGGCGTG
Product: chaperonin GroEL
Products: NA
Alternate protein names: GroEL protein; Protein Cpn60 [H]
Number of amino acids: Translated: 546; Mature: 545
Protein sequence:
>546_residues MAAKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASK TSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISKPCTTNKEIAQVGSISANSDSSIGD RIAEAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQV AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQA KRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDAL HATRAAVEEGIVPGGGVALIRARTAIAALTGVNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNA ATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMGMDM
Sequences:
>Translated_546_residues MAAKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASK TSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISKPCTTNKEIAQVGSISANSDSSIGD RIAEAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQV AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQA KRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDAL HATRAAVEEGIVPGGGVALIRARTAIAALTGVNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNA ATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMGMDM >Mature_545_residues AAKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKT SDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISKPCTTNKEIAQVGSISANSDSSIGDR IAEAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQVA KAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQAK RIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALH ATRAAVEEGIVPGGGVALIRARTAIAALTGVNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNAA TGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMGMDM
Specific function: Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions [H]
COG id: COG0459
COG function: function code O; Chaperonin GroEL (HSP60 family)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chaperonin (HSP60) family [H]
Homologues:
Organism=Homo sapiens, GI41399285, Length=528, Percent_Identity=53.7878787878788, Blast_Score=548, Evalue=1e-156, Organism=Homo sapiens, GI31542947, Length=528, Percent_Identity=53.7878787878788, Blast_Score=548, Evalue=1e-156, Organism=Homo sapiens, GI24307939, Length=363, Percent_Identity=23.9669421487603, Blast_Score=76, Evalue=8e-14, Organism=Homo sapiens, GI5453607, Length=552, Percent_Identity=22.1014492753623, Blast_Score=69, Evalue=9e-12, Organism=Escherichia coli, GI1790586, Length=529, Percent_Identity=75.992438563327, Blast_Score=797, Evalue=0.0, Organism=Caenorhabditis elegans, GI17555558, Length=529, Percent_Identity=52.930056710775, Blast_Score=553, Evalue=1e-157, Organism=Caenorhabditis elegans, GI193210679, Length=218, Percent_Identity=51.8348623853211, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI25144674, Length=548, Percent_Identity=22.2627737226277, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI25147750, Length=131, Percent_Identity=35.1145038167939, Blast_Score=66, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6323288, Length=526, Percent_Identity=52.4714828897338, Blast_Score=539, Evalue=1e-154, Organism=Saccharomyces cerevisiae, GI6322446, Length=577, Percent_Identity=22.1837088388215, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6322524, Length=375, Percent_Identity=24.2666666666667, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24641193, Length=527, Percent_Identity=52.1821631878558, Blast_Score=554, Evalue=1e-158, Organism=Drosophila melanogaster, GI24641191, Length=527, Percent_Identity=52.1821631878558, Blast_Score=554, Evalue=1e-158, Organism=Drosophila melanogaster, GI45550936, Length=527, Percent_Identity=50.6641366223909, Blast_Score=537, Evalue=1e-153, Organism=Drosophila melanogaster, GI45550132, Length=527, Percent_Identity=50.6641366223909, Blast_Score=537, Evalue=1e-153, Organism=Drosophila melanogaster, GI45550935, Length=527, Percent_Identity=50.6641366223909, Blast_Score=537, Evalue=1e-153, Organism=Drosophila melanogaster, GI17864606, Length=550, Percent_Identity=44, Blast_Score=460, Evalue=1e-129, Organism=Drosophila melanogaster, GI24584129, Length=532, Percent_Identity=37.218045112782, Blast_Score=333, Evalue=3e-91, Organism=Drosophila melanogaster, GI19921262, Length=532, Percent_Identity=37.218045112782, Blast_Score=333, Evalue=3e-91, Organism=Drosophila melanogaster, GI17647245, Length=576, Percent_Identity=23.0902777777778, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: 2180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 360 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 15012 Molecules/Cell In: Growth Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018370 - InterPro: IPR001844 - InterPro: IPR002423 [H]
Pfam domain/function: PF00118 Cpn60_TCP1 [H]
EC number: NA
Molecular weight: Translated: 57146; Mature: 57015
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00296 CHAPERONINS_CPN60
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI CCCCCCEECCCHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHH ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGI HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DKAVAAAVEELKKISKPCTTNKEIAQVGSISANSDSSIGDRIAEAMDKVGKEGVITVEDG HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC KSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQV CHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHH AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQV HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEE IAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDY EECCCCCEEHHHHHHHCCCCCEEECCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHH DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALI HHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEH RARTAIAALTGVNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNA HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCC ATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMG CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCC GMGMDM CCCCCC >Mature Secondary Structure AAKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI CCCCCEECCCHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHH ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGI HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DKAVAAAVEELKKISKPCTTNKEIAQVGSISANSDSSIGDRIAEAMDKVGKEGVITVEDG HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC KSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQV CHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHH AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQV HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEE IAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDY EECCCCCEEHHHHHHHCCCCCEEECCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHH DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALI HHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEH RARTAIAALTGVNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNA HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCC ATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMG CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCC GMGMDM CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA