| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is 83720113
Identifier: 83720113
GI number: 83720113
Start: 1231841
End: 1232995
Strand: Direct
Name: 83720113
Synonym: BTH_I1091
Alternate gene names: NA
Gene position: 1231841-1232995 (Clockwise)
Preceding gene: 83719206
Following gene: 83719620
Centisome position: 32.34
GC content: 65.63
Gene sequence:
>1155_bases ATGACTCTGTCGATAACGAGCAATTTCGACGCGGGCGCGATCGACGTCGTGTCGTGCGAGCGCGCGGACGCGATCCGGCT GCGCGTGCGCGGCGACAATCGTTCCGAGTTCGCGCAGTGGTTCTACTTCCGGCTGACGGGCGCGCGCGGCGAGCGTTGCG TGATGACGTTCGAGAACGCGAACGACTGCGCGTATCCGGCGGGCTGGCGCGACTATCGCGCGGTCGCGAGCTACGACCGG GTCAACTGGTTCCGCGTGCCGACGTCGTACGACGGCCAGGTGCTGACGATCGACCATACGCCCGATTTCGACAGCATCCA TTACGCGTATTTCGAGCCGTACGGCGAAGAACGCCATTCGGAGTTTCTCGGCGCAGTCCAGCAGATGCCGCAAGCGAGCG TCGTCGAGTTGGGCCGCACGGTCGAGGGGCGGCCGATGTCGCTCGTCGTGCTCGGCACGCCCGACGACGCGGGCGTCGCG AAGAAGAAGGTGTGGATCATCGCGCGCCAGCATCCGGGAGAATCGATGGCGGAATGGTTCGTCGAAGGGCTCGTGAAGCG GCTCGTCGGCTGGGGCGACTGGTCGGGCGATCCGGTCGCGCGCAAGCTGTACGAACATGCGACGTTCTACATCGTGCCGA ACATGAACCCGGACGGCAGCGTGCACGGCAACCTGCGCACGAACGCGGCGGGCGCGAACCTGAATCGCGAATGGATGGAG CCGGACGCCGCGCGCAGCCCCGAAGTGCTGGTCGTGCGCGATGCGATTCATTCGATCGGCTGTGATCTGTTCTTCGATAT CCACGGCGACGAGGATCTGCCGTACGTATTCGCGGCCGGCTCCGAGATGCTGCCCGGCTTCACCGAGCGGCAGCGCGTCG AGCAGAGCGCATTCATCAACGCGTTCAAGCGCGCGAGCCCCGATTTCCAGGACGAGCATGGCTATCCGCCCGGCAAGTAC AAGGAAGATGCGCTCAAGCTCGCGTCGAAGTACATCGGGCATCGGTTCGGCTGCCTGTCGCTGACGCTCGAAATGCCGTT CAAGGACAACGCGAATCTGCCCGACGAGCATGCCGGCTGGAGCGGCGCGCGCAGTGCGTCGCTCGGCGCGGCGGCGCTGG GCGCGATCCTCGAGCACGTGAGGGCTTTCGCCTGA
Upstream 100 bases:
>100_bases CGACGAAGCGGCGTCGAACGACGACACCTTCGTGTTTCGCCGCCGTGCTGGCGCTTGAATGTCCGGCGGCCCGAAGCGGC TGTCGCAACCAGGAGATGCA
Downstream 100 bases:
>100_bases GCGCGGCCTGAGCGCTCGTCCCGGTGCGGCGGATGCGCGCATCGGGCGCGCATGAAAAAGCCGGAGCGGCATCGCCGCGC TCCGGCTTTTTTGCGTCCGG
Product: zinc carboxypeptidase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MTLSITSNFDAGAIDVVSCERADAIRLRVRGDNRSEFAQWFYFRLTGARGERCVMTFENANDCAYPAGWRDYRAVASYDR VNWFRVPTSYDGQVLTIDHTPDFDSIHYAYFEPYGEERHSEFLGAVQQMPQASVVELGRTVEGRPMSLVVLGTPDDAGVA KKKVWIIARQHPGESMAEWFVEGLVKRLVGWGDWSGDPVARKLYEHATFYIVPNMNPDGSVHGNLRTNAAGANLNREWME PDAARSPEVLVVRDAIHSIGCDLFFDIHGDEDLPYVFAAGSEMLPGFTERQRVEQSAFINAFKRASPDFQDEHGYPPGKY KEDALKLASKYIGHRFGCLSLTLEMPFKDNANLPDEHAGWSGARSASLGAAALGAILEHVRAFA
Sequences:
>Translated_384_residues MTLSITSNFDAGAIDVVSCERADAIRLRVRGDNRSEFAQWFYFRLTGARGERCVMTFENANDCAYPAGWRDYRAVASYDR VNWFRVPTSYDGQVLTIDHTPDFDSIHYAYFEPYGEERHSEFLGAVQQMPQASVVELGRTVEGRPMSLVVLGTPDDAGVA KKKVWIIARQHPGESMAEWFVEGLVKRLVGWGDWSGDPVARKLYEHATFYIVPNMNPDGSVHGNLRTNAAGANLNREWME PDAARSPEVLVVRDAIHSIGCDLFFDIHGDEDLPYVFAAGSEMLPGFTERQRVEQSAFINAFKRASPDFQDEHGYPPGKY KEDALKLASKYIGHRFGCLSLTLEMPFKDNANLPDEHAGWSGARSASLGAAALGAILEHVRAFA >Mature_383_residues TLSITSNFDAGAIDVVSCERADAIRLRVRGDNRSEFAQWFYFRLTGARGERCVMTFENANDCAYPAGWRDYRAVASYDRV NWFRVPTSYDGQVLTIDHTPDFDSIHYAYFEPYGEERHSEFLGAVQQMPQASVVELGRTVEGRPMSLVVLGTPDDAGVAK KKVWIIARQHPGESMAEWFVEGLVKRLVGWGDWSGDPVARKLYEHATFYIVPNMNPDGSVHGNLRTNAAGANLNREWMEP DAARSPEVLVVRDAIHSIGCDLFFDIHGDEDLPYVFAAGSEMLPGFTERQRVEQSAFINAFKRASPDFQDEHGYPPGKYK EDALKLASKYIGHRFGCLSLTLEMPFKDNANLPDEHAGWSGARSASLGAAALGAILEHVRAFA
Specific function: Unknown
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI190194403, Length=353, Percent_Identity=27.1954674220963, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI120444924, Length=332, Percent_Identity=26.8072289156627, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI222352158, Length=312, Percent_Identity=25.3205128205128, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI31657119, Length=311, Percent_Identity=26.3665594855305, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI170763513, Length=333, Percent_Identity=24.024024024024, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI115533904, Length=366, Percent_Identity=25.9562841530055, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI193202888, Length=188, Percent_Identity=30.8510638297872, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI28571179, Length=200, Percent_Identity=27, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI24641847, Length=200, Percent_Identity=27, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI161077807, Length=200, Percent_Identity=27, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI24641845, Length=288, Percent_Identity=25.3472222222222, Blast_Score=82, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000834 [H]
Pfam domain/function: PF00246 Peptidase_M14 [H]
EC number: NA
Molecular weight: Translated: 42853; Mature: 42722
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSITSNFDAGAIDVVSCERADAIRLRVRGDNRSEFAQWFYFRLTGARGERCVMTFENA CEEEEECCCCCCCEEEEECCCCCEEEEEEECCCHHHHHHEEEEEEECCCCCEEEEEECCC NDCAYPAGWRDYRAVASYDRVNWFRVPTSYDGQVLTIDHTPDFDSIHYAYFEPYGEERHS CCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHH EFLGAVQQMPQASVVELGRTVEGRPMSLVVLGTPDDAGVAKKKVWIIARQHPGESMAEWF HHHHHHHHCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHH VEGLVKRLVGWGDWSGDPVARKLYEHATFYIVPNMNPDGSVHGNLRTNAAGANLNREWME HHHHHHHHHCCCCCCCCHHHHHHHHCEEEEEEECCCCCCCEECCEECCCCCCCCCHHHCC PDAARSPEVLVVRDAIHSIGCDLFFDIHGDEDLPYVFAAGSEMLPGFTERQRVEQSAFIN CCCCCCCCEEEEHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHH AFKRASPDFQDEHGYPPGKYKEDALKLASKYIGHRFGCLSLTLEMPFKDNANLPDEHAGW HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCC SGARSASLGAAALGAILEHVRAFA CCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLSITSNFDAGAIDVVSCERADAIRLRVRGDNRSEFAQWFYFRLTGARGERCVMTFENA EEEEECCCCCCCEEEEECCCCCEEEEEEECCCHHHHHHEEEEEEECCCCCEEEEEECCC NDCAYPAGWRDYRAVASYDRVNWFRVPTSYDGQVLTIDHTPDFDSIHYAYFEPYGEERHS CCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHH EFLGAVQQMPQASVVELGRTVEGRPMSLVVLGTPDDAGVAKKKVWIIARQHPGESMAEWF HHHHHHHHCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHH VEGLVKRLVGWGDWSGDPVARKLYEHATFYIVPNMNPDGSVHGNLRTNAAGANLNREWME HHHHHHHHHCCCCCCCCHHHHHHHHCEEEEEEECCCCCCCEECCEECCCCCCCCCHHHCC PDAARSPEVLVVRDAIHSIGCDLFFDIHGDEDLPYVFAAGSEMLPGFTERQRVEQSAFIN CCCCCCCCEEEEHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHH AFKRASPDFQDEHGYPPGKYKEDALKLASKYIGHRFGCLSLTLEMPFKDNANLPDEHAGW HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCC SGARSASLGAAALGAILEHVRAFA CCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8320209 [H]