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The map label for this gene is glxA [H]

Identifier: 83719880

GI number: 83719880

Start: 1988444

End: 1989487

Strand: Direct

Name: glxA [H]

Synonym: BTH_I1774

Alternate gene names: 83719880

Gene position: 1988444-1989487 (Clockwise)

Preceding gene: 83721350

Following gene: 161723155

Centisome position: 52.2

GC content: 67.24

Gene sequence:

>1044_bases
ATGTCCGTGAATCGTCCAGCGAGTTCAGCCCGCACGATACAGGTGGCGATCGTCGCGCTGCCGCCCGTGTCGATGTCGGG
TGTCGGGCCGATCGTCGACGCGCTGAATCTCGCGAACGAGATCGACGGGCGTTTGCTGTACCGCTGGCAGGTGTGCTCAT
GGGACGGCCGCGCGGTGCCGCTCGCGGGCGGTGCGCAATGGCATGCCGACGCCGCGTTCAACGACGCGATCGTCTGTGAT
TGGCTGATCGTCATTAGCGAGCGGTTCCAGCAGTTCGCCGACTACAGGCTCTTTCTCGCGAGTCTCGCGCGGGTTGGCCA
GCGCACGCCGCTCGTGACGGGCATCCATCACGGCGTGTGGTGGCTTGCGATGGCGGGGCAGCTGTCGGGCTACCGGGTCA
GCGTGAACTGGGAGACGTACCAGCAGTTCGCCGAGCAGTTCGAGCGCTCGATCGTCACGCAGCAGATCTTCGAGATCGAC
CGCGATCGCGCGACGTGCGCGGGCGGCCAGGCGAGCGTCGACTTCATGCTGGCGATGATCGGCCGCGACCAGGGGCCCGA
ACTCGCGGAGCGGATTGCCGACGCGCTCGGCACGGGGCCGCTCAGAAGCGGCGAGGCGCGCCAGCGGATTCCGTTCGTGA
CGGCGCCGGGCGAGCGGCACCCGCGGTTGAACGATGCGTTGCTGCTGATGGAGGCGAATATCGAGGATCCGTTGACGACC
GACGAGATCGCGGGGCTCGTGGGCGTGTCGCGCAGGCAGCTCGAGCGGCTTTTCAGGCAGTATCTCGGCGCGATGCCGTC
GAAGTACTACCTCAATTTGCGGCTCCTGAAGGCGCGCACGCAGTTGCAGCGCACGAGCAAATCGGTCGTGCAGGTCAGTC
TCGCGTGCGGGTTTTCTTCCGCCGCTCATTTTTCCAATGCCTATCGGGAGCGGTTCGGCGTCACGCCGCGCGAGGATCGG
CGGGCCTGGCTCGAGAAGCAGCATGGGGGCGTCGAGCCGCCTCGGGCGGGGGCGATGGTCGAGCGGCCCTCCGGGCGGGA
ATGA

Upstream 100 bases:

>100_bases
AGAGGGCGATCCGGCCGAGGTGCTCGCGCGCCCGCAGAGCGAGCGCCTGAAGCAATTCCTGTCGGGCAGCCTCAAATAAC
GGCCGACGCCGCAGGTCGTG

Downstream 100 bases:

>100_bases
GTCGGGTCTTTTGGGTTTTTTGTCCGTTTTTTTCGAGGGCTTTTTTCGTGGTGAATGGCCTGTGATGTTAGCGGTCGGTT
AGCGTTGCCCCTCCCCGGGG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MSVNRPASSARTIQVAIVALPPVSMSGVGPIVDALNLANEIDGRLLYRWQVCSWDGRAVPLAGGAQWHADAAFNDAIVCD
WLIVISERFQQFADYRLFLASLARVGQRTPLVTGIHHGVWWLAMAGQLSGYRVSVNWETYQQFAEQFERSIVTQQIFEID
RDRATCAGGQASVDFMLAMIGRDQGPELAERIADALGTGPLRSGEARQRIPFVTAPGERHPRLNDALLLMEANIEDPLTT
DEIAGLVGVSRRQLERLFRQYLGAMPSKYYLNLRLLKARTQLQRTSKSVVQVSLACGFSSAAHFSNAYRERFGVTPREDR
RAWLEKQHGGVEPPRAGAMVERPSGRE

Sequences:

>Translated_347_residues
MSVNRPASSARTIQVAIVALPPVSMSGVGPIVDALNLANEIDGRLLYRWQVCSWDGRAVPLAGGAQWHADAAFNDAIVCD
WLIVISERFQQFADYRLFLASLARVGQRTPLVTGIHHGVWWLAMAGQLSGYRVSVNWETYQQFAEQFERSIVTQQIFEID
RDRATCAGGQASVDFMLAMIGRDQGPELAERIADALGTGPLRSGEARQRIPFVTAPGERHPRLNDALLLMEANIEDPLTT
DEIAGLVGVSRRQLERLFRQYLGAMPSKYYLNLRLLKARTQLQRTSKSVVQVSLACGFSSAAHFSNAYRERFGVTPREDR
RAWLEKQHGGVEPPRAGAMVERPSGRE
>Mature_346_residues
SVNRPASSARTIQVAIVALPPVSMSGVGPIVDALNLANEIDGRLLYRWQVCSWDGRAVPLAGGAQWHADAAFNDAIVCDW
LIVISERFQQFADYRLFLASLARVGQRTPLVTGIHHGVWWLAMAGQLSGYRVSVNWETYQQFAEQFERSIVTQQIFEIDR
DRATCAGGQASVDFMLAMIGRDQGPELAERIADALGTGPLRSGEARQRIPFVTAPGERHPRLNDALLLMEANIEDPLTTD
EIAGLVGVSRRQLERLFRQYLGAMPSKYYLNLRLLKARTQLQRTSKSVVQVSLACGFSSAAHFSNAYRERFGVTPREDRR
AWLEKQHGGVEPPRAGAMVERPSGRE

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790339, Length=101, Percent_Identity=36.6336633663366, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38576; Mature: 38445

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVNRPASSARTIQVAIVALPPVSMSGVGPIVDALNLANEIDGRLLYRWQVCSWDGRAVP
CCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEE
LAGGAQWHADAAFNDAIVCDWLIVISERFQQFADYRLFLASLARVGQRTPLVTGIHHGVW
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
WLAMAGQLSGYRVSVNWETYQQFAEQFERSIVTQQIFEIDRDRATCAGGQASVDFMLAMI
HHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHH
GRDQGPELAERIADALGTGPLRSGEARQRIPFVTAPGERHPRLNDALLLMEANIEDPLTT
CCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCEEECCCCCCCCCCCEEEEEECCCCCCCCH
DEIAGLVGVSRRQLERLFRQYLGAMPSKYYLNLRLLKARTQLQRTSKSVVQVSLACGFSS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHEEHHHHCCCH
AAHFSNAYRERFGVTPREDRRAWLEKQHGGVEPPRAGAMVERPSGRE
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure 
SVNRPASSARTIQVAIVALPPVSMSGVGPIVDALNLANEIDGRLLYRWQVCSWDGRAVP
CCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEE
LAGGAQWHADAAFNDAIVCDWLIVISERFQQFADYRLFLASLARVGQRTPLVTGIHHGVW
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
WLAMAGQLSGYRVSVNWETYQQFAEQFERSIVTQQIFEIDRDRATCAGGQASVDFMLAMI
HHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHH
GRDQGPELAERIADALGTGPLRSGEARQRIPFVTAPGERHPRLNDALLLMEANIEDPLTT
CCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCEEECCCCCCCCCCCEEEEEECCCCCCCCH
DEIAGLVGVSRRQLERLFRQYLGAMPSKYYLNLRLLKARTQLQRTSKSVVQVSLACGFSS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHEEHHHHCCCH
AAHFSNAYRERFGVTPREDRRAWLEKQHGGVEPPRAGAMVERPSGRE
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]