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The map label for this gene is rfaC-2 [H]

Identifier: 83719801

GI number: 83719801

Start: 1775034

End: 1776056

Strand: Direct

Name: rfaC-2 [H]

Synonym: BTH_I1574

Alternate gene names: 83719801

Gene position: 1775034-1776056 (Clockwise)

Preceding gene: 83719760

Following gene: 83719772

Centisome position: 46.6

GC content: 69.11

Gene sequence:

>1023_bases
ATGAAACGTATTCTCATTGTGAAGGTCACGTCGCTGGGCGATGTCGTGCAGACGTTGCCCGTCGTCGCGGATCTCCACCG
CGCGTTCCCGGGCGTGCAGGTGGATTGGGCCGTCGACGAGTCGTGCGCCGACGTCGTGCGCTGGAACACCGGCGTGAGCC
GTGTGCTGTGCGCGCCGTTGCGCCGCTTCAAAAAAGCGCGCAGCCGGGCCGACCTGAAGGCGATCGCGGCTTCGATCGGC
GAGTTGCGCGCGTATCGCTACGATGCGGTGATCGATCTTCACGGTGTCTACAAGAGTGCGATCATTTCATTTCTCGCCCG
CGCGCGGCGGCGCTACGGCTACCGGAACCAGGATCTCGGGGAACTCGGCGCGATGTTCGCGTACAACGGCCGCTTCGGTC
CGCGTCCCGCCTGCGACGCGTGGCACGGCATGCGCGTGAGCGCGGGCGAGGCGCTCGGCTACGAGCCGCAAGGCCGCGCC
GACTATCTGCTCGATGTGCCGCCGGAGTCGCGCGAGCCGCATACGGCGCCGCTCGCCGCGCTCGCGGAGCCGGCCGGGCC
GTACGCGCTGTTTTTTCATGCGACGTCGAACGACGACAAGCGCTGGCCGACCGATCACTGGAGTGCGGTTGCGTGCGAGA
TGCGCGCGCGCGGGCTGCATGTGCTGCTGCCGTGGGGCAGCGAGCACGAGCGGGAAGAGGCGCAGCGGATCGCGGCGCGC
GCGCCGGGCGCGGTCGTGCTGCCCAAGCTGACGCTCGCCGACGTCGCGCGCAAGATCGACCGCGCGACGCTCGTGGTCGG
AGTCGATACCGGTTTCGTGCACATGGCGCATGCGCTCGAGAAGCCGACCGTCATGATCTTCCGTGCGACGTCGCGTCAGC
ATCTGGGCGTGAGCGGTGCGCCGCACTCGTTGTCGATCGGCGACGAGGGCGCGCCGCCGAGCGTGGACGACGTGCTCGGC
GCGATCGAGCGCGTCTATCCGATGGGCATCGTCGAGCAGCCGCGGCGCGTCGCCGCGATGTGA

Upstream 100 bases:

>100_bases
TCGGGGCAAATGTAAATTCTTCGCAATTTGTGGTGTTTGTGACGTTCTGTCTATTTAGAATGCCCAACTACCGAGTTGGG
TTGGGTACATCCACATAAAA

Downstream 100 bases:

>100_bases
GCGTGCGCCGGCGGCGGGCCGGGCGCTGGCGCGCTCAGGACAGCAATAATTCGAACGCGATCACGGCCGCAATGGCCGCG
AGGTTCGCCGCGAGCGCTTC

Product: lipopolysaccharide heptosyltransferase I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MKRILIVKVTSLGDVVQTLPVVADLHRAFPGVQVDWAVDESCADVVRWNTGVSRVLCAPLRRFKKARSRADLKAIAASIG
ELRAYRYDAVIDLHGVYKSAIISFLARARRRYGYRNQDLGELGAMFAYNGRFGPRPACDAWHGMRVSAGEALGYEPQGRA
DYLLDVPPESREPHTAPLAALAEPAGPYALFFHATSNDDKRWPTDHWSAVACEMRARGLHVLLPWGSEHEREEAQRIAAR
APGAVVLPKLTLADVARKIDRATLVVGVDTGFVHMAHALEKPTVMIFRATSRQHLGVSGAPHSLSIGDEGAPPSVDDVLG
AIERVYPMGIVEQPRRVAAM

Sequences:

>Translated_340_residues
MKRILIVKVTSLGDVVQTLPVVADLHRAFPGVQVDWAVDESCADVVRWNTGVSRVLCAPLRRFKKARSRADLKAIAASIG
ELRAYRYDAVIDLHGVYKSAIISFLARARRRYGYRNQDLGELGAMFAYNGRFGPRPACDAWHGMRVSAGEALGYEPQGRA
DYLLDVPPESREPHTAPLAALAEPAGPYALFFHATSNDDKRWPTDHWSAVACEMRARGLHVLLPWGSEHEREEAQRIAAR
APGAVVLPKLTLADVARKIDRATLVVGVDTGFVHMAHALEKPTVMIFRATSRQHLGVSGAPHSLSIGDEGAPPSVDDVLG
AIERVYPMGIVEQPRRVAAM
>Mature_340_residues
MKRILIVKVTSLGDVVQTLPVVADLHRAFPGVQVDWAVDESCADVVRWNTGVSRVLCAPLRRFKKARSRADLKAIAASIG
ELRAYRYDAVIDLHGVYKSAIISFLARARRRYGYRNQDLGELGAMFAYNGRFGPRPACDAWHGMRVSAGEALGYEPQGRA
DYLLDVPPESREPHTAPLAALAEPAGPYALFFHATSNDDKRWPTDHWSAVACEMRARGLHVLLPWGSEHEREEAQRIAAR
APGAVVLPKLTLADVARKIDRATLVVGVDTGFVHMAHALEKPTVMIFRATSRQHLGVSGAPHSLSIGDEGAPPSVDDVLG
AIERVYPMGIVEQPRRVAAM

Specific function: Heptose transfer to the lipopolysaccharide core. It transfers the innnermost heptose to [4'-P](3-deoxy-D-manno- octulosonic acid)2-IVA [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790051, Length=300, Percent_Identity=37.3333333333333, Blast_Score=179, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011908 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 37249; Mature: 37249

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILIVKVTSLGDVVQTLPVVADLHRAFPGVQVDWAVDESCADVVRWNTGVSRVLCAPL
CCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHH
RRFKKARSRADLKAIAASIGELRAYRYDAVIDLHGVYKSAIISFLARARRRYGYRNQDLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHH
ELGAMFAYNGRFGPRPACDAWHGMRVSAGEALGYEPQGRADYLLDVPPESREPHTAPLAA
HHHHHEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHH
LAEPAGPYALFFHATSNDDKRWPTDHWSAVACEMRARGLHVLLPWGSEHEREEAQRIAAR
HCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHC
APGAVVLPKLTLADVARKIDRATLVVGVDTGFVHMAHALEKPTVMIFRATSRQHLGVSGA
CCCCEEECCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCC
PHSLSIGDEGAPPSVDDVLGAIERVYPMGIVEQPRRVAAM
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCHHHHCC
>Mature Secondary Structure
MKRILIVKVTSLGDVVQTLPVVADLHRAFPGVQVDWAVDESCADVVRWNTGVSRVLCAPL
CCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHH
RRFKKARSRADLKAIAASIGELRAYRYDAVIDLHGVYKSAIISFLARARRRYGYRNQDLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHH
ELGAMFAYNGRFGPRPACDAWHGMRVSAGEALGYEPQGRADYLLDVPPESREPHTAPLAA
HHHHHEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHH
LAEPAGPYALFFHATSNDDKRWPTDHWSAVACEMRARGLHVLLPWGSEHEREEAQRIAAR
HCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHC
APGAVVLPKLTLADVARKIDRATLVVGVDTGFVHMAHALEKPTVMIFRATSRQHLGVSGA
CCCCEEECCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCC
PHSLSIGDEGAPPSVDDVLGAIERVYPMGIVEQPRRVAAM
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Glycosyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478319; 8041620; 9278503; 1624462 [H]