Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is wbpM [H]
Identifier: 83719442
GI number: 83719442
Start: 1680085
End: 1682055
Strand: Direct
Name: wbpM [H]
Synonym: BTH_I1483
Alternate gene names: 83719442
Gene position: 1680085-1682055 (Clockwise)
Preceding gene: 83718571
Following gene: 83720904
Centisome position: 44.11
GC content: 64.64
Gene sequence:
>1971_bases TTGGGGCAGCCATCGACGTTCGCTGGAGCCGCTTCCAAATACTCACATCAAAATAAACGCAATATGACGCGAACGTTTCG CCCCAAGGCTTCATGGCTTTCCCTGGGCGCCTTCCTGTTCGACTTGATGGCGGTCGTATGCGCATGGTTGATCGCATACG TGGTTCGATTCAACGGTGTAATACCGCCCCAATTCCTGAGCGGCGCCTTCGTCGCGCTCGTATGGGTGGTTCCGTTGTAC GGTCTGCTGTTTCATGTTTTCGGCTTGTACCGCGGCCTCTGGGTATTCGCGAGCCTGCCGGATCTGCTGCGCATCTCGAA GGCCGTGGTGGGCGGCAGCCTGATCGTAATGATCGGCGCGGTAATGCTACAGCCGGTTCCGATCATTCCCCGTTCGGTGC TTGTCCTGTCGCCGATGCTGCTGTTTCTCGCGATGGGCGGCGCGCGGGCGCTCTATCGGGCGACGAAGGAGTTCTATCTA TACGGCGGCTTGATCGGGCAGGGCAAGCCGGTGCTGATTCTCGGCGCGGGCAACGCCGGCGCGAGTCTCGCCCGTGAGCT GTCTCGTTCCGGCGAATGGCGCCTTGCCGGTTTGCTCGACGACGATCCCGCAAAACACGGCCGTGAAGTCTACGGCTACA AAGTCCTTGGCCCCATCAGCGAAGTCGCGCACTGGGCCGAGGCAGCAAAAGCCGAATACGCGATCATCGCGATTCCATCC GCATCGGTCGAGACGCAACGCCGCGTCGCCACCCTCTGCGTGCGCGCCGGCGTCAAGGCGATGGTGCTGCCGTCGCTGAC CGCATTGATGCCCGGCCAAGGCATCCTGTCGCAGATCCGCCAGATCGACCTCGAAGACCTGCTCGGCCGCGAGGCCGTGA CGATCGACACGCCGCACGTCGAAGCGCTGTTGCGCGGCCGCGTCGTGATGGTGACGGGCGCAGGCGGCTCGATCGGCTCG GAGCTGTGCCGCCAGATCCTGAAGTTCCAGCCCGCGCAACTGATCGCGTTCGACCTGTCCGAATATGCGATGTACCGTCT CACGGAAGAGTTGCGCGAGCGCTTCCCCGATCTGCCCGTCGTGCCGATCATCGGCGATGCGAAGGATTCGCTGCTGCTCG ACCAGGTGATGTCGCGCTACGCGCCGCACATCGTGTTCCATGCGGCCGCGTACAAGCACGTGCCGCTGATGGAGGAGCTC AACGCGTGGCAGGCGTTGCGCAACAACGTGCTCGGCACCTATCGCGTCGCGCGCGCGGCGATTCGCCACGACGTCCGGCA TTTCGTGCTGATCTCGACCGACAAGGCCGTGAACCCGACGAACGTGATGGGCGCGAGCAAGCGCTTGGCCGAGATGGCGT GTCAGGCGCTGCAGCAGACGAGCGCGCGCACGCAGTTCGAGACGGTGCGCTTCGGCAACGTGCTAGGCAGCGCGGGCAGC GTGATTCCGAAGTTCCAGCAGCAGATCGCGAAGGGCGGCCCGGTGACGGTCACGCATCCGGAGATCACGCGCTTCTTCAT GACGATTCCCGAGGCGTCGCAGCTCGTGCTGCAGGCGTCGAGCATGGGGCAGGGCGGCGAGATCTTCATTCTCGACATGG GCGAGCCGGTGAAGATCGTCGATCTCGCGCGCGACCTGATCCGCCTTTACGGCTTTACCGAGGACCACATCCGCATCGAG TTCAGCGGGCTGCGTCCGGGCGAGAAGCTCTACGAGGAACTGCTCGCCGACGACGAGACGACAACCCGCACGCCGCATCC GAAGCTGCGCACGGCGCGTGCGCGCGAGGTGCCGGATCATCTGCTCGACGAACTGCTGCCGTGGCTGATGCAGCACCGAG TGCTGAGCGATGACGAAGTGCGGCGCGATCTGCGGCGCTGGGTGCCCGAGTATCAACCCGCCGTCGGCCCGACGCTGCAG AGCGTGCCGACCGGCAGCGGGCTGGTCGCCGGCCTCGGTCGCGACGCCTGA
Upstream 100 bases:
>100_bases ATCATGCTGGTTGGCGCCGTTGTGTCGCTTTCAGTGTTGACGAGTTCTCCCGCGATCCAGTGGATGAGCATCGCCATTTG GGGATTGATTCTATTTCTCA
Downstream 100 bases:
>100_bases CGCTACAAGGAAGGCACAAGGAAGGCGAGACGGTTCCGGCCGGGATGCTGTCGAAGTCGGCCCGCACGTCCGCCGCCCGG GCGGCGGCAAGGCCGAGGGC
Product: capsular polysaccharide biosynthesis
Products: UDPglucoseal [C]
Alternate protein names: NA
Number of amino acids: Translated: 656; Mature: 655
Protein sequence:
>656_residues MGQPSTFAGAASKYSHQNKRNMTRTFRPKASWLSLGAFLFDLMAVVCAWLIAYVVRFNGVIPPQFLSGAFVALVWVVPLY GLLFHVFGLYRGLWVFASLPDLLRISKAVVGGSLIVMIGAVMLQPVPIIPRSVLVLSPMLLFLAMGGARALYRATKEFYL YGGLIGQGKPVLILGAGNAGASLARELSRSGEWRLAGLLDDDPAKHGREVYGYKVLGPISEVAHWAEAAKAEYAIIAIPS ASVETQRRVATLCVRAGVKAMVLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTGAGGSIGS ELCRQILKFQPAQLIAFDLSEYAMYRLTEELRERFPDLPVVPIIGDAKDSLLLDQVMSRYAPHIVFHAAAYKHVPLMEEL NAWQALRNNVLGTYRVARAAIRHDVRHFVLISTDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGS VIPKFQQQIAKGGPVTVTHPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGFTEDHIRIE FSGLRPGEKLYEELLADDETTTRTPHPKLRTARAREVPDHLLDELLPWLMQHRVLSDDEVRRDLRRWVPEYQPAVGPTLQ SVPTGSGLVAGLGRDA
Sequences:
>Translated_656_residues MGQPSTFAGAASKYSHQNKRNMTRTFRPKASWLSLGAFLFDLMAVVCAWLIAYVVRFNGVIPPQFLSGAFVALVWVVPLY GLLFHVFGLYRGLWVFASLPDLLRISKAVVGGSLIVMIGAVMLQPVPIIPRSVLVLSPMLLFLAMGGARALYRATKEFYL YGGLIGQGKPVLILGAGNAGASLARELSRSGEWRLAGLLDDDPAKHGREVYGYKVLGPISEVAHWAEAAKAEYAIIAIPS ASVETQRRVATLCVRAGVKAMVLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTGAGGSIGS ELCRQILKFQPAQLIAFDLSEYAMYRLTEELRERFPDLPVVPIIGDAKDSLLLDQVMSRYAPHIVFHAAAYKHVPLMEEL NAWQALRNNVLGTYRVARAAIRHDVRHFVLISTDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGS VIPKFQQQIAKGGPVTVTHPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGFTEDHIRIE FSGLRPGEKLYEELLADDETTTRTPHPKLRTARAREVPDHLLDELLPWLMQHRVLSDDEVRRDLRRWVPEYQPAVGPTLQ SVPTGSGLVAGLGRDA >Mature_655_residues GQPSTFAGAASKYSHQNKRNMTRTFRPKASWLSLGAFLFDLMAVVCAWLIAYVVRFNGVIPPQFLSGAFVALVWVVPLYG LLFHVFGLYRGLWVFASLPDLLRISKAVVGGSLIVMIGAVMLQPVPIIPRSVLVLSPMLLFLAMGGARALYRATKEFYLY GGLIGQGKPVLILGAGNAGASLARELSRSGEWRLAGLLDDDPAKHGREVYGYKVLGPISEVAHWAEAAKAEYAIIAIPSA SVETQRRVATLCVRAGVKAMVLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTGAGGSIGSE LCRQILKFQPAQLIAFDLSEYAMYRLTEELRERFPDLPVVPIIGDAKDSLLLDQVMSRYAPHIVFHAAAYKHVPLMEELN AWQALRNNVLGTYRVARAAIRHDVRHFVLISTDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGSV IPKFQQQIAKGGPVTVTHPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGFTEDHIRIEF SGLRPGEKLYEELLADDETTTRTPHPKLRTARAREVPDHLLDELLPWLMQHRVLSDDEVRRDLRRWVPEYQPAVGPTLQS VPTGSGLVAGLGRDA
Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]
COG id: COG1086
COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR003869 [H]
Pfam domain/function: PF02719 Polysacc_synt_2 [H]
EC number: 5.1.3.2 [C]
Molecular weight: Translated: 72093; Mature: 71962
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQPSTFAGAASKYSHQNKRNMTRTFRPKASWLSLGAFLFDLMAVVCAWLIAYVVRFNGV CCCCCCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IPPQFLSGAFVALVWVVPLYGLLFHVFGLYRGLWVFASLPDLLRISKAVVGGSLIVMIGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHH VMLQPVPIIPRSVLVLSPMLLFLAMGGARALYRATKEFYLYGGLIGQGKPVLILGAGNAG HHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCEECCCCCEEEEECCCCC ASLARELSRSGEWRLAGLLDDDPAKHGREVYGYKVLGPISEVAHWAEAAKAEYAIIAIPS HHHHHHHHCCCCEEEEECCCCCCHHCCCCCCCEEECCHHHHHHHHHHHHCCCEEEEEECC ASVETQRRVATLCVRAGVKAMVLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHV CCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCEEEECCHHH EALLRGRVVMVTGAGGSIGSELCRQILKFQPAQLIAFDLSEYAMYRLTEELRERFPDLPV HHHHCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE VPIIGDAKDSLLLDQVMSRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARAA EEEECCCHHHHHHHHHHHHHCCHHEEHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHH IRHDVRHFVLISTDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGS HHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VIPKFQQQIAKGGPVTVTHPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIV CCHHHHHHHHCCCCEEEECHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHH DLARDLIRLYGFTEDHIRIEFSGLRPGEKLYEELLADDETTTRTPHPKLRTARAREVPDH HHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHH LLDELLPWLMQHRVLSDDEVRRDLRRWVPEYQPAVGPTLQSVPTGSGLVAGLGRDA HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GQPSTFAGAASKYSHQNKRNMTRTFRPKASWLSLGAFLFDLMAVVCAWLIAYVVRFNGV CCCCCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IPPQFLSGAFVALVWVVPLYGLLFHVFGLYRGLWVFASLPDLLRISKAVVGGSLIVMIGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHH VMLQPVPIIPRSVLVLSPMLLFLAMGGARALYRATKEFYLYGGLIGQGKPVLILGAGNAG HHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCEECCCCCEEEEECCCCC ASLARELSRSGEWRLAGLLDDDPAKHGREVYGYKVLGPISEVAHWAEAAKAEYAIIAIPS HHHHHHHHCCCCEEEEECCCCCCHHCCCCCCCEEECCHHHHHHHHHHHHCCCEEEEEECC ASVETQRRVATLCVRAGVKAMVLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHV CCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCEEEECCHHH EALLRGRVVMVTGAGGSIGSELCRQILKFQPAQLIAFDLSEYAMYRLTEELRERFPDLPV HHHHCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE VPIIGDAKDSLLLDQVMSRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARAA EEEECCCHHHHHHHHHHHHHCCHHEEHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHH IRHDVRHFVLISTDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGS HHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VIPKFQQQIAKGGPVTVTHPEITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIV CCHHHHHHHHCCCCEEEECHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHH DLARDLIRLYGFTEDHIRIEFSGLRPGEKLYEELLADDETTTRTPHPKLRTARAREVPDH HHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHH LLDELLPWLMQHRVLSDDEVRRDLRRWVPEYQPAVGPTLQSVPTGSGLVAGLGRDA HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NAD+ [C]
Metal ions: NA
Kcat value (1/min): 57600 [C]
Specific activity: 233.3
Km value (mM): 0.256 {UDPgalactose}} 0.225 {UDPgalactose}} 0.2 {UDPgalactose}} 0.18 {UDPgalactose}} 0.16 {UDPgalactose}} 0.14 {UDPgalactose}} 0.048 {UDPgalactose}} 0.026 {UDPgalactose}} [C]
Substrates: UDPglucose [C]
Specific reaction: UDPglucose <==> UDPglucoseal [C]
General reaction: Epimerization (specificity for carbon forming a hexosulose) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961465 [H]