Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is aroE [H]
Identifier: 83719204
GI number: 83719204
Start: 1316838
End: 1317710
Strand: Direct
Name: aroE [H]
Synonym: BTH_I1171
Alternate gene names: 83719204
Gene position: 1316838-1317710 (Clockwise)
Preceding gene: 83721664
Following gene: 83721431
Centisome position: 34.57
GC content: 72.51
Gene sequence:
>873_bases ATGAGCGCGGCCGTCGAACCGCTCGTGCGCGATCGCTACGCGGTGATCGGCAATCCGGTCGCGCACAGTAAATCGCCGTT CATTCATGCGCGCTTCGCCGAGCAGACGGGCGAGGCGATCGAATACACGCATCTGCTCGCGCCGCTCGACGGCTTCGCGG CCACGGTGCGCGAATTCACCGCGCAGGGCGGCCGGGGCGTGAACGTCACCGTGCCGTTCAAGCTCGAGGCCTACGCGCTT GCCGATACGCTGTCGCCGCGCGCGGCGGCGGCGGGCGCTGTCAACACGCTGCGCTTCGATGCGGACGGCATCTTCGGCGA CAACACCGACGGCGTCGGCCTCGTGCGCGACATCGAGACGAATCTCGGCGTGAGCCTGACGGGCGCGCGGATCCTGCTGC TCGGCGCGGGCGGCGCGGCGCGCGGCGTCGTGCTGCCGATGCTCGAGCGCGGGCCCGCGTCGCTCACGATCGTCAATCGG ACCGCGAGCAAGGCGGAAGAACTCGTCGGCCAGTTCACGCAAGCGGCGCACGACGCGGGCTGCGTGCTCGCGGGCGGCGG GCCCGAGCGGGTCGCGCGCGAGCCGTACGACGTGATCGTCAACGCGACGGCGGGCAGTCTCGACGCGGCGTTGCCCGAGT GCGACGCCGCGGCGTTCTGCCCGGCGACGCTCGCGTACGACATGATGTACGGCGCGCGGCCGACCGTCTTCATGGAGCAT GCGGCGACGCTCGGCGCGCGCACGGCGGACGGGCTCGGAATGCTCGTCGAGCAGGCAGCGGAATCGTTCTATCTCTGGCG CGGCGTGCGGCCCGACGGCGCGCCCGTGCTCGCCGCGCTGCGCGCCGCACTCGCGGCGTCGGCGGCGCACTGA
Upstream 100 bases:
>100_bases ACGCCGCCGACGAATCGGCGGAAAGCGAAGCGGAAGCGCTCGCCGAGGCGAGCGGCGGCGGCAATGGCGAATCGCCGGCG AACGGCGAGGAACAGTCGAA
Downstream 100 bases:
>100_bases GCGCGAGAGGCGAAGGCGGGATGCGCAACAGTCCCGTTTCGCCCGGCCCGGGCTACGCGCCGTCGCGCGGCGCGGCGCGC ACGCGCAAACGCGGCGTCGC
Product: shikimate 5-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSAAVEPLVRDRYAVIGNPVAHSKSPFIHARFAEQTGEAIEYTHLLAPLDGFAATVREFTAQGGRGVNVTVPFKLEAYAL ADTLSPRAAAAGAVNTLRFDADGIFGDNTDGVGLVRDIETNLGVSLTGARILLLGAGGAARGVVLPMLERGPASLTIVNR TASKAEELVGQFTQAAHDAGCVLAGGGPERVAREPYDVIVNATAGSLDAALPECDAAAFCPATLAYDMMYGARPTVFMEH AATLGARTADGLGMLVEQAAESFYLWRGVRPDGAPVLAALRAALAASAAH
Sequences:
>Translated_290_residues MSAAVEPLVRDRYAVIGNPVAHSKSPFIHARFAEQTGEAIEYTHLLAPLDGFAATVREFTAQGGRGVNVTVPFKLEAYAL ADTLSPRAAAAGAVNTLRFDADGIFGDNTDGVGLVRDIETNLGVSLTGARILLLGAGGAARGVVLPMLERGPASLTIVNR TASKAEELVGQFTQAAHDAGCVLAGGGPERVAREPYDVIVNATAGSLDAALPECDAAAFCPATLAYDMMYGARPTVFMEH AATLGARTADGLGMLVEQAAESFYLWRGVRPDGAPVLAALRAALAASAAH >Mature_289_residues SAAVEPLVRDRYAVIGNPVAHSKSPFIHARFAEQTGEAIEYTHLLAPLDGFAATVREFTAQGGRGVNVTVPFKLEAYALA DTLSPRAAAAGAVNTLRFDADGIFGDNTDGVGLVRDIETNLGVSLTGARILLLGAGGAARGVVLPMLERGPASLTIVNRT ASKAEELVGQFTQAAHDAGCVLAGGGPERVAREPYDVIVNATAGSLDAALPECDAAAFCPATLAYDMMYGARPTVFMEHA ATLGARTADGLGMLVEQAAESFYLWRGVRPDGAPVLAALRAALAASAAH
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1789675, Length=278, Percent_Identity=49.2805755395683, Blast_Score=231, Evalue=4e-62, Organism=Escherichia coli, GI1787983, Length=268, Percent_Identity=29.1044776119403, Blast_Score=102, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6320332, Length=165, Percent_Identity=33.9393939393939, Blast_Score=70, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 [H]
Pfam domain/function: PF01488 Shikimate_DH; PF08501 Shikimate_dh_N [H]
EC number: =1.1.1.25 [H]
Molecular weight: Translated: 29945; Mature: 29814
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAVEPLVRDRYAVIGNPVAHSKSPFIHARFAEQTGEAIEYTHLLAPLDGFAATVREFT CCCCHHHHHHCCHHHCCCCCCCCCCCEEEEEEHHHCCCHHHHHHHHHCHHHHHHHHHHHH AQGGRGVNVTVPFKLEAYALADTLSPRAAAAGAVNTLRFDADGIFGDNTDGVGLVRDIET HCCCCCEEEEECCEEEEEEHHHCCCCHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCC NLGVSLTGARILLLGAGGAARGVVLPMLERGPASLTIVNRTASKAEELVGQFTQAAHDAG CCCEEECCCEEEEEECCCCCCCEEEHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCC CVLAGGGPERVAREPYDVIVNATAGSLDAALPECDAAAFCPATLAYDMMYGARPTVFMEH EEEECCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHCHHHHHHHHHHCCCCHHHHHH AATLGARTADGLGMLVEQAAESFYLWRGVRPDGAPVLAALRAALAASAAH HHHHCCCCCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SAAVEPLVRDRYAVIGNPVAHSKSPFIHARFAEQTGEAIEYTHLLAPLDGFAATVREFT CCCHHHHHHCCHHHCCCCCCCCCCCEEEEEEHHHCCCHHHHHHHHHCHHHHHHHHHHHH AQGGRGVNVTVPFKLEAYALADTLSPRAAAAGAVNTLRFDADGIFGDNTDGVGLVRDIET HCCCCCEEEEECCEEEEEEHHHCCCCHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCC NLGVSLTGARILLLGAGGAARGVVLPMLERGPASLTIVNRTASKAEELVGQFTQAAHDAG CCCEEECCCEEEEEECCCCCCCEEEHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCC CVLAGGGPERVAREPYDVIVNATAGSLDAALPECDAAAFCPATLAYDMMYGARPTVFMEH EEEECCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHCHHHHHHHHHHCCCCHHHHHH AATLGARTADGLGMLVEQAAESFYLWRGVRPDGAPVLAALRAALAASAAH HHHHCCCCCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA