| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is dehII-1
Identifier: 83719028
GI number: 83719028
Start: 2258752
End: 2259507
Strand: Reverse
Name: dehII-1
Synonym: BTH_I1995
Alternate gene names: NA
Gene position: 2259507-2258752 (Counterclockwise)
Preceding gene: 83718929
Following gene: 83719981
Centisome position: 59.32
GC content: 73.54
Gene sequence:
>756_bases ATGCCCGGCACCCCGCCCGCCTTCCCGAAGGCGATTCTCTTCGACGCGTACGGCACGCTGTTCGACGTGCACGCGGTCGT CGCCGCGGCCGAGCAGATGTTTCCCGGGCGCGGCGAGGCGCTGTCGCAGCTCTGGCGGCGCAAGCAGATCGAATACTCGC AGCTGCGCACGCTCGCCGATCCGGCGGGCGGACGCTATCGGCCGTTCTGGGAACTGACGCTCGACGCGCTGCGCTTTGCC GCGCGCGCACTCGGCCTCGCGCTGTCCGCCGCGGCCGAGAAACGGTTGATGGACGAATACGCATGCCTGTCGACCTATCC GGACACAGTGCCGGCGCTGCGCGCGCTGCGGGCGCGCAGCGCGCCGCCGAAGCTCGCGATCCTGTCGAACGGCAACCCGC AGATGCTCGACATCGCGGTCAAGAGCGCCGGGATGAGCGGCCTCTTCGACCGCGTGCTGTCCGTCGACGCGGTGCGCGCG TACAAGCCGTCGCCCGCCGCGTACGCGCTCGGCACGGCGGCGTTCGATGCGGCCGCGGCCGACATCGCGTTCGTGTCGTC GAACGGCTGGGATGTCGCGGGCGCCGGCTGGTTCGGCTACCGGACCTTCTGGCTGAACCGCACGGGCGCGCCGCTCGAGG AGCTCGGCGCGGTGCCCGCGGGCGCGGGCGCCGGCATGGCCGAGTTGCTCGCCTTTCTCGACGCGCCGCCCGCCGCCGCG AAAGCGGCCGGCCGCGCGCGCCCGGCGCCCGCCTGA
Upstream 100 bases:
>100_bases ATATCGAAAAGTAAAAGATCAAGTGATGATTACTGTCTTTTTTAGTTCAAGTCATCACTAATAGAATCGACTTCGACCTC TGATCGTGGAGCGCAACGTC
Downstream 100 bases:
>100_bases CGCGACGCGCCGCCGCCCGGATTCACGCAATTGCACCACTCCGTAACTGACCGACCAAGGAGAAAACCGATGACCACGAC GCTGAAGCTGCCGCAAGGCA
Product: haloacid dehalogenase, type II
Products: NA
Alternate protein names: Cryptic L-isomer-specific dehalogenase; DhlS5I; Halocarboxylic acid halidohydrolase; L-2-haloacid dehalogenase; L-DEX [H]
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MPGTPPAFPKAILFDAYGTLFDVHAVVAAAEQMFPGRGEALSQLWRRKQIEYSQLRTLADPAGGRYRPFWELTLDALRFA ARALGLALSAAAEKRLMDEYACLSTYPDTVPALRALRARSAPPKLAILSNGNPQMLDIAVKSAGMSGLFDRVLSVDAVRA YKPSPAAYALGTAAFDAAAADIAFVSSNGWDVAGAGWFGYRTFWLNRTGAPLEELGAVPAGAGAGMAELLAFLDAPPAAA KAAGRARPAPA
Sequences:
>Translated_251_residues MPGTPPAFPKAILFDAYGTLFDVHAVVAAAEQMFPGRGEALSQLWRRKQIEYSQLRTLADPAGGRYRPFWELTLDALRFA ARALGLALSAAAEKRLMDEYACLSTYPDTVPALRALRARSAPPKLAILSNGNPQMLDIAVKSAGMSGLFDRVLSVDAVRA YKPSPAAYALGTAAFDAAAADIAFVSSNGWDVAGAGWFGYRTFWLNRTGAPLEELGAVPAGAGAGMAELLAFLDAPPAAA KAAGRARPAPA >Mature_250_residues PGTPPAFPKAILFDAYGTLFDVHAVVAAAEQMFPGRGEALSQLWRRKQIEYSQLRTLADPAGGRYRPFWELTLDALRFAA RALGLALSAAAEKRLMDEYACLSTYPDTVPALRALRARSAPPKLAILSNGNPQMLDIAVKSAGMSGLFDRVLSVDAVRAY KPSPAAYALGTAAFDAAAADIAFVSSNGWDVAGAGWFGYRTFWLNRTGAPLEELGAVPAGAGAGMAELLAFLDAPPAAAK AAGRARPAPA
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. S-2- haloalkanoic acid dehalogenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006388 - InterPro: IPR006328 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.8.1.2 [H]
Molecular weight: Translated: 26412; Mature: 26281
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGTPPAFPKAILFDAYGTLFDVHAVVAAAEQMFPGRGEALSQLWRRKQIEYSQLRTLAD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHC PAGGRYRPFWELTLDALRFAARALGLALSAAAEKRLMDEYACLSTYPDTVPALRALRARS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC APPKLAILSNGNPQMLDIAVKSAGMSGLFDRVLSVDAVRAYKPSPAAYALGTAAFDAAAA CCCCEEEEECCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH DIAFVSSNGWDVAGAGWFGYRTFWLNRTGAPLEELGAVPAGAGAGMAELLAFLDAPPAAA HEEEEECCCCCCCCCCHHHHEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCHHH KAAGRARPAPA HHCCCCCCCCC >Mature Secondary Structure PGTPPAFPKAILFDAYGTLFDVHAVVAAAEQMFPGRGEALSQLWRRKQIEYSQLRTLAD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHC PAGGRYRPFWELTLDALRFAARALGLALSAAAEKRLMDEYACLSTYPDTVPALRALRARS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC APPKLAILSNGNPQMLDIAVKSAGMSGLFDRVLSVDAVRAYKPSPAAYALGTAAFDAAAA CCCCEEEEECCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH DIAFVSSNGWDVAGAGWFGYRTFWLNRTGAPLEELGAVPAGAGAGMAELLAFLDAPPAAA HEEEEECCCCCCCCCCHHHHEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCHHH KAAGRARPAPA HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA