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The map label for this gene is yqgF [C]

Identifier: 83718957

GI number: 83718957

Start: 1659077

End: 1659517

Strand: Direct

Name: yqgF [C]

Synonym: BTH_I1463

Alternate gene names: 83718957

Gene position: 1659077-1659517 (Clockwise)

Preceding gene: 83719645

Following gene: 83721370

Centisome position: 43.55

GC content: 66.67

Gene sequence:

>441_bases
ATGAGCGCGGCGCTTTCGCGCGACGCGACGCTCCTGGCGTTCGATTACGGCGAAAAGCGCATCGGCGTGGCGATCGGCAA
TCTGCTGACGCGCACGGCCCGTGCGCTCGTCATCGTGCCCAATCTGAATCGCGAGCACCGCTTCAAGGCGGTCGGCGAGC
TGATCGCCGAATGGAAGCCGGATGCGCTCGTCGTCGGCCTGCCGCTGCATCCGGACGGCGCGCCGCACGAGATGACGCAG
CGGGCGTTGCGCTTCGGCAATCAGCTGAATGGCCGCTTCAACCTGCCGGTGAGCTGGGTCGACGAACGCTACTCGTCGGT
CGAGGCGCGCGCCGGCCTGCGCGCGCGCGGCGACGCCGCGAATCGCGTCGACGCCGAAGCCGCCCGCGTCATTCTTCAAC
AATTCCTCGACGGATTGCCCGATCAACATGAGTTCAATTGA

Upstream 100 bases:

>100_bases
CGCGGATCGTGTTCGACACGCCCGCCGAGGAGCGCTTCGAAGCGGCGCTCGGGCTGCTCGGCGTGAGTTCGTCGATGCTT
TCCGGCGAGGCAGGGCACGC

Downstream 100 bases:

>100_bases
CGCCGAGGCGCTTTATCGCGTCCTGCTCGACCAGATTCGCGGCGCCTATGGCGGCACCGCGTTCGCCGATGCCGGCGGCC
CCGTGCTCGCCGGCATCCAC

Product: Holliday junction resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSAALSRDATLLAFDYGEKRIGVAIGNLLTRTARALVIVPNLNREHRFKAVGELIAEWKPDALVVGLPLHPDGAPHEMTQ
RALRFGNQLNGRFNLPVSWVDERYSSVEARAGLRARGDAANRVDAEAARVILQQFLDGLPDQHEFN

Sequences:

>Translated_146_residues
MSAALSRDATLLAFDYGEKRIGVAIGNLLTRTARALVIVPNLNREHRFKAVGELIAEWKPDALVVGLPLHPDGAPHEMTQ
RALRFGNQLNGRFNLPVSWVDERYSSVEARAGLRARGDAANRVDAEAARVILQQFLDGLPDQHEFN
>Mature_145_residues
SAALSRDATLLAFDYGEKRIGVAIGNLLTRTARALVIVPNLNREHRFKAVGELIAEWKPDALVVGLPLHPDGAPHEMTQR
ALRFGNQLNGRFNLPVSWVDERYSSVEARAGLRARGDAANRVDAEAARVILQQFLDGLPDQHEFN

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination [H]

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family [H]

Homologues:

Organism=Escherichia coli, GI1789318, Length=133, Percent_Identity=41.3533834586466, Blast_Score=107, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337 [H]

Pfam domain/function: PF03652 UPF0081 [H]

EC number: NA

Molecular weight: Translated: 16152; Mature: 16020

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAALSRDATLLAFDYGEKRIGVAIGNLLTRTARALVIVPNLNREHRFKAVGELIAEWKP
CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHCCC
DALVVGLPLHPDGAPHEMTQRALRFGNQLNGRFNLPVSWVDERYSSVEARAGLRARGDAA
CEEEEEECCCCCCCCHHHHHHHHHCCHHCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCC
NRVDAEAARVILQQFLDGLPDQHEFN
CCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SAALSRDATLLAFDYGEKRIGVAIGNLLTRTARALVIVPNLNREHRFKAVGELIAEWKP
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHCCC
DALVVGLPLHPDGAPHEMTQRALRFGNQLNGRFNLPVSWVDERYSSVEARAGLRARGDAA
CEEEEEECCCCCCCCHHHHHHHHHCCHHCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCC
NRVDAEAARVILQQFLDGLPDQHEFN
CCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA