Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is ycjP [C]
Identifier: 83718830
GI number: 83718830
Start: 1756681
End: 1757538
Strand: Direct
Name: ycjP [C]
Synonym: BTH_I1555
Alternate gene names: 83718830
Gene position: 1756681-1757538 (Clockwise)
Preceding gene: 83721578
Following gene: 83719309
Centisome position: 46.12
GC content: 63.05
Gene sequence:
>858_bases ATGCAGCCTAAGATGACGATCAGCCGGGCAGTGATCTACGCGGCGCTGATCCTGTTCGCGCTGTACTTCCTGTTCCCGAT CTACGTAATGCTGTCGACGTCGTTCAAGGATCTCGACCAGCTTCGCACCGGCAACCTGCTCACGCCGCCGTCGAGCTGGA CGATCGCGCCGTGGGTGAAGGCGTGGGGCGAGGCATGCACCGGCGTGCGCTGCGACGGGATGAAGCCGTTCTTCTTCAAC TCGATCAAGATGGTGATCCCGGCCGTGCTGATCTCGTCGCTGATCGGCGCGTTCAACGGCTACGTGCTCACGCACTGGCG CTTTCGCGGCGCGGATGCGCTGTTCACGATGCTGCTCGTCGGCTGCTTCATTCCGTTCCAGGTGATCCTGCTGCCGATGG CGCGCCTGCAGGGGATGCTCGGGCTCGCCAACACGATTCCGGGCCTCGTGTTCGTGCACGTCGTCTACGGCATCGCGTTC ACGACGATGTTCTTCCGCAACTTCTACGTGAGCGTGCCGGCCGAGCTCGTGAAGGCGGCGCGCATCGACGGCGCGGGCTT CTTCACGATCTTCACGAAGATCCTGCTGCCGGTGTCGCTGCCGATCTTCATGGTGTGCCTGATCTGGCAGTTCACGCAGA TCTGGAATGACTTCCTGTTCGGGATCGTGTTCTCGGGCGTCGATTCGATGCCGATCACGGTCGCGCTGAACAACCTCGTC AACACGTCGACGGGCGTGAAGGAATACAACGTCGACATGGCGGGCGCGATCATCGCCGCGCTGCCGACGCTGCTCGTCTA CGTGATCGCCGGCCGCTACTTCGTGCGCGGCCTCACGGCGGGCGCGGTCAAGGGGTGA
Upstream 100 bases:
>100_bases GGGCAACTCGGCGTTGGCGCGGCGTCGTCGGTGATGATGCTCGCCACCGTGGTGGCGGTACTCGTGCCGCTGATGTATCT GGAATCGAGGAGCACCCGCA
Downstream 100 bases:
>100_bases CGTCGGCACACGCACGACGCGAATACGCGAGGCGCCGCGCGCGGCGCAACGATACGAGACACGACGCGGCGCACGCGCGC CGCAATGAGACAGAGGATTC
Product: maltose ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MQPKMTISRAVIYAALILFALYFLFPIYVMLSTSFKDLDQLRTGNLLTPPSSWTIAPWVKAWGEACTGVRCDGMKPFFFN SIKMVIPAVLISSLIGAFNGYVLTHWRFRGADALFTMLLVGCFIPFQVILLPMARLQGMLGLANTIPGLVFVHVVYGIAF TTMFFRNFYVSVPAELVKAARIDGAGFFTIFTKILLPVSLPIFMVCLIWQFTQIWNDFLFGIVFSGVDSMPITVALNNLV NTSTGVKEYNVDMAGAIIAALPTLLVYVIAGRYFVRGLTAGAVKG
Sequences:
>Translated_285_residues MQPKMTISRAVIYAALILFALYFLFPIYVMLSTSFKDLDQLRTGNLLTPPSSWTIAPWVKAWGEACTGVRCDGMKPFFFN SIKMVIPAVLISSLIGAFNGYVLTHWRFRGADALFTMLLVGCFIPFQVILLPMARLQGMLGLANTIPGLVFVHVVYGIAF TTMFFRNFYVSVPAELVKAARIDGAGFFTIFTKILLPVSLPIFMVCLIWQFTQIWNDFLFGIVFSGVDSMPITVALNNLV NTSTGVKEYNVDMAGAIIAALPTLLVYVIAGRYFVRGLTAGAVKG >Mature_285_residues MQPKMTISRAVIYAALILFALYFLFPIYVMLSTSFKDLDQLRTGNLLTPPSSWTIAPWVKAWGEACTGVRCDGMKPFFFN SIKMVIPAVLISSLIGAFNGYVLTHWRFRGADALFTMLLVGCFIPFQVILLPMARLQGMLGLANTIPGLVFVHVVYGIAF TTMFFRNFYVSVPAELVKAARIDGAGFFTIFTKILLPVSLPIFMVCLIWQFTQIWNDFLFGIVFSGVDSMPITVALNNLV NTSTGVKEYNVDMAGAIIAALPTLLVYVIAGRYFVRGLTAGAVKG
Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0395
COG function: function code G; ABC-type sugar transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787571, Length=286, Percent_Identity=26.5734265734266, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1789860, Length=270, Percent_Identity=24.8148148148148, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1790464, Length=302, Percent_Identity=28.1456953642384, Blast_Score=78, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31464; Mature: 31464
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS ; PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPKMTISRAVIYAALILFALYFLFPIYVMLSTSFKDLDQLRTGNLLTPPSSWTIAPWVK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHH AWGEACTGVRCDGMKPFFFNSIKMVIPAVLISSLIGAFNGYVLTHWRFRGADALFTMLLV HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHH GCFIPFQVILLPMARLQGMLGLANTIPGLVFVHVVYGIAFTTMFFRNFYVSVPAELVKAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH RIDGAGFFTIFTKILLPVSLPIFMVCLIWQFTQIWNDFLFGIVFSGVDSMPITVALNNLV HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH NTSTGVKEYNVDMAGAIIAALPTLLVYVIAGRYFVRGLTAGAVKG CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQPKMTISRAVIYAALILFALYFLFPIYVMLSTSFKDLDQLRTGNLLTPPSSWTIAPWVK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHH AWGEACTGVRCDGMKPFFFNSIKMVIPAVLISSLIGAFNGYVLTHWRFRGADALFTMLLV HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHH GCFIPFQVILLPMARLQGMLGLANTIPGLVFVHVVYGIAFTTMFFRNFYVSVPAELVKAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH RIDGAGFFTIFTKILLPVSLPIFMVCLIWQFTQIWNDFLFGIVFSGVDSMPITVALNNLV HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH NTSTGVKEYNVDMAGAIIAALPTLLVYVIAGRYFVRGLTAGAVKG CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]