Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is yliG [C]
Identifier: 83718703
GI number: 83718703
Start: 1981639
End: 1983150
Strand: Direct
Name: yliG [C]
Synonym: BTH_I1767
Alternate gene names: 83718703
Gene position: 1981639-1983150 (Clockwise)
Preceding gene: 83719786
Following gene: 83719869
Centisome position: 52.02
GC content: 62.43
Gene sequence:
>1512_bases ATGCGCGGGCGGCGGCGGGCCGCCCGCGGTTTGTCGAAACATTTGTACTGGAACGAATTGATATCTATGCAGCAGGCTAC CGGAGCATTCATGAAAACGCTGTTCTTGCAGGCACCGTCGTACGACGGCTTCGACGGCGGCGCGGGCTCCCGCTACCAGG CGAAGCGCGAGATCCGATCCTTCTGGTATCCGACCTGGCTCGCGCAGCCGGCAGCACTCGTGCCGGGCAGCCGCGTGCTC GACGCGCCCGCTGACGGCCTGTCGGTCGAGGAGACGCTGAAGATCGCGAAGGACTACGATCTCGTGATCATCCACACGAG CACGCCGTCGTTCCCGACCGACGCGATGTTCGCGGAAGACCTGAAGAAGATGAAGCCGTCGATGCTCGTCGGCATGGTCG GCGCGAAGGTCGCGGTCGATCCGCACAACTCGCTCACCGCGACGCAGGCGATCGATTTCGTCTGCCGCGAGGAATTCGAC TACACGTGCAAGGACATCGCCGAAGGCAAGCCGTTCGCCGAGATCCTCGGGATGAGCTACCGCGCGAAGGACGGCTCGAT CGAGCACAACGGCCCGCGTCCGATGATCGAGAACATGGACGAGCTGCCGTTCGTCGCGCCCGTCTACAAGCGCGACCTGA AGATCGACAACTACTTCATCGGCTACCTGAACTACCCGTACGTGTCGATCTACACGGGCCGCGGCTGCCGCTCGAAGTGC ACGTTCTGCCTGTGGCCGCAGACGGTGGGCGGCCATCGCTACCGCGTGCGCTCGGTCGAGAGCGTGCTCGCGGAAGTGAA GTGGATTCGCGACAACATGCCGGAAGTGAAGGAGATCATGTTCGACGACGACACCTTCACCGATTTCAAGCCGCGCGTCG AGGAGATCGCGCGCGGGCTCGGCAAGCTCGGCGTCACGTGGTCGTGCAACGCGAAGGCGAACGTGCCGTACTCGACGCTG AAGATCATGAAGGAGAACGGCCTGCGCCTGCTGCTCGTCGGCTACGAGTCGGGCGACGACCAGATCCTGCTGAACATCAA GAAGGGCCTGCGCACGGACATCGCGCGCCGCTTCAACGAGGATTGCAAGAAGCTCGGCATCAAGATCCACGGCACCTTCA TCCTCGGCCTGCCGGGCGAGACGAAGGAAACGATCAAGAAGACGATCGAGTATGCGAAGGAAATCAATCCGCACACGATC CAGGTGTCGCTCGCCGCGCCGTATCCGGGCACGCGCCTGTACAACCAGGCGATCGAGAACGGCTGGATGGAAGAGAACAA GACGATCAACCTCGTCAGCAAGGAAGGCGTGCAGCTCGCCGCGATCGGCTATCCGCACCTGCCCAAGGAAGAGATCTACC ACCAGCTCGAGCACTTCTATCGCGAGTTCTATTTCCGGCCGTCGAAGATCTGGGAAATCCTGCGCGAGATGCTGACGAGC TGGGACATGATGAAGCGCCGCCTGCGCGAGGGCGTCGAGTTCTTCCGTTTCCTGCGCGCGCACGAGGCGTGA
Upstream 100 bases:
>100_bases TGTGGCGCGGCGCGCGGATGACGGTGGTCGGCGGCGATGCGCGCGCGACGGTCGTCGAAGCGGGCGACGGGCGCTGACAG GCGCCGGACACACATACGGG
Downstream 100 bases:
>100_bases TCGGTGGCGGCTTGCGACGCGGCGCCGCGCGCGCTGATCTTCACGGCGGACGACTTCGGCCTGCATGAGCGGGTCAACGC GGCCGTCGAGCGTGCGCACC
Product: radical SAM domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MRGRRRAARGLSKHLYWNELISMQQATGAFMKTLFLQAPSYDGFDGGAGSRYQAKREIRSFWYPTWLAQPAALVPGSRVL DAPADGLSVEETLKIAKDYDLVIIHTSTPSFPTDAMFAEDLKKMKPSMLVGMVGAKVAVDPHNSLTATQAIDFVCREEFD YTCKDIAEGKPFAEILGMSYRAKDGSIEHNGPRPMIENMDELPFVAPVYKRDLKIDNYFIGYLNYPYVSIYTGRGCRSKC TFCLWPQTVGGHRYRVRSVESVLAEVKWIRDNMPEVKEIMFDDDTFTDFKPRVEEIARGLGKLGVTWSCNAKANVPYSTL KIMKENGLRLLLVGYESGDDQILLNIKKGLRTDIARRFNEDCKKLGIKIHGTFILGLPGETKETIKKTIEYAKEINPHTI QVSLAAPYPGTRLYNQAIENGWMEENKTINLVSKEGVQLAAIGYPHLPKEEIYHQLEHFYREFYFRPSKIWEILREMLTS WDMMKRRLREGVEFFRFLRAHEA
Sequences:
>Translated_503_residues MRGRRRAARGLSKHLYWNELISMQQATGAFMKTLFLQAPSYDGFDGGAGSRYQAKREIRSFWYPTWLAQPAALVPGSRVL DAPADGLSVEETLKIAKDYDLVIIHTSTPSFPTDAMFAEDLKKMKPSMLVGMVGAKVAVDPHNSLTATQAIDFVCREEFD YTCKDIAEGKPFAEILGMSYRAKDGSIEHNGPRPMIENMDELPFVAPVYKRDLKIDNYFIGYLNYPYVSIYTGRGCRSKC TFCLWPQTVGGHRYRVRSVESVLAEVKWIRDNMPEVKEIMFDDDTFTDFKPRVEEIARGLGKLGVTWSCNAKANVPYSTL KIMKENGLRLLLVGYESGDDQILLNIKKGLRTDIARRFNEDCKKLGIKIHGTFILGLPGETKETIKKTIEYAKEINPHTI QVSLAAPYPGTRLYNQAIENGWMEENKTINLVSKEGVQLAAIGYPHLPKEEIYHQLEHFYREFYFRPSKIWEILREMLTS WDMMKRRLREGVEFFRFLRAHEA >Mature_503_residues MRGRRRAARGLSKHLYWNELISMQQATGAFMKTLFLQAPSYDGFDGGAGSRYQAKREIRSFWYPTWLAQPAALVPGSRVL DAPADGLSVEETLKIAKDYDLVIIHTSTPSFPTDAMFAEDLKKMKPSMLVGMVGAKVAVDPHNSLTATQAIDFVCREEFD YTCKDIAEGKPFAEILGMSYRAKDGSIEHNGPRPMIENMDELPFVAPVYKRDLKIDNYFIGYLNYPYVSIYTGRGCRSKC TFCLWPQTVGGHRYRVRSVESVLAEVKWIRDNMPEVKEIMFDDDTFTDFKPRVEEIARGLGKLGVTWSCNAKANVPYSTL KIMKENGLRLLLVGYESGDDQILLNIKKGLRTDIARRFNEDCKKLGIKIHGTFILGLPGETKETIKKTIEYAKEINPHTI QVSLAAPYPGTRLYNQAIENGWMEENKTINLVSKEGVQLAAIGYPHLPKEEIYHQLEHFYREFYFRPSKIWEILREMLTS WDMMKRRLREGVEFFRFLRAHEA
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 57628; Mature: 57628
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRRRAARGLSKHLYWNELISMQQATGAFMKTLFLQAPSYDGFDGGAGSRYQAKREIRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH FWYPTWLAQPAALVPGSRVLDAPADGLSVEETLKIAKDYDLVIIHTSTPSFPTDAMFAED HCCHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH LKKMKPSMLVGMVGAKVAVDPHNSLTATQAIDFVCREEFDYTCKDIAEGKPFAEILGMSY HHHHCHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHCCCE RAKDGSIEHNGPRPMIENMDELPFVAPVYKRDLKIDNYFIGYLNYPYVSIYTGRGCRSKC ECCCCCCCCCCCCCHHCCHHCCCCCCHHHHHCCEECCEEEEEECCCEEEEEECCCCCCCC TFCLWPQTVGGHRYRVRSVESVLAEVKWIRDNMPEVKEIMFDDDTFTDFKPRVEEIARGL CEEECCCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHH GKLGVTWSCNAKANVPYSTLKIMKENGLRLLLVGYESGDDQILLNIKKGLRTDIARRFNE HHCCCEEECCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHH DCKKLGIKIHGTFILGLPGETKETIKKTIEYAKEINPHTIQVSLAAPYPGTRLYNQAIEN HHHHCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHC GWMEENKTINLVSKEGVQLAAIGYPHLPKEEIYHQLEHFYREFYFRPSKIWEILREMLTS CCCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH WDMMKRRLREGVEFFRFLRAHEA HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRGRRRAARGLSKHLYWNELISMQQATGAFMKTLFLQAPSYDGFDGGAGSRYQAKREIRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH FWYPTWLAQPAALVPGSRVLDAPADGLSVEETLKIAKDYDLVIIHTSTPSFPTDAMFAED HCCHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH LKKMKPSMLVGMVGAKVAVDPHNSLTATQAIDFVCREEFDYTCKDIAEGKPFAEILGMSY HHHHCHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHCCCE RAKDGSIEHNGPRPMIENMDELPFVAPVYKRDLKIDNYFIGYLNYPYVSIYTGRGCRSKC ECCCCCCCCCCCCCHHCCHHCCCCCCHHHHHCCEECCEEEEEECCCEEEEEECCCCCCCC TFCLWPQTVGGHRYRVRSVESVLAEVKWIRDNMPEVKEIMFDDDTFTDFKPRVEEIARGL CEEECCCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHH GKLGVTWSCNAKANVPYSTLKIMKENGLRLLLVGYESGDDQILLNIKKGLRTDIARRFNE HHCCCEEECCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHH DCKKLGIKIHGTFILGLPGETKETIKKTIEYAKEINPHTIQVSLAAPYPGTRLYNQAIEN HHHHCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHC GWMEENKTINLVSKEGVQLAAIGYPHLPKEEIYHQLEHFYREFYFRPSKIWEILREMLTS CCCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH WDMMKRRLREGVEFFRFLRAHEA HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]