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The map label for this gene is rnaSA [H]

Identifier: 83718400

GI number: 83718400

Start: 1336655

End: 1337086

Strand: Direct

Name: rnaSA [H]

Synonym: BTH_I1190

Alternate gene names: 83718400

Gene position: 1336655-1337086 (Clockwise)

Preceding gene: 83718682

Following gene: 83719313

Centisome position: 35.09

GC content: 66.2

Gene sequence:

>432_bases
ATGGCACGCAAGTGGCTCCGCAACGGCGCGCTCGCGTCCGTCTTCGCGATCCTCGCGATGGGCAACATCGGCGCTTCGCC
GGGCAGTCTGGTTTCCGCCGCATACGCACGGGAAGCCGCCGCGGTCAACGGGGCGGCGGCGCAGGTCGATACGGTCCCCG
CGTCCCGTCTGCCGCGCGAGGCAGCGGCCACGCTGCGCCTGATCGCCGTGGGCGGCCCCTATCCGTACGAGAAAGACGGC
GCGGTATTCGGCAACTACGAACGGATCTTGCCGAAGATGCGGCGCGGCTATTACCACGAGTACACGGTGCCGACGCCGCG
AGCCCGCAATCGCGGCGCGCGGCGCATCGTCTGTGGCGGTCCCTTGAGGCGCGTCGACAATTGTTATTACACCGACGACC
ACTACAACAGTTTCAAACGTATCGTTGATTGA

Upstream 100 bases:

>100_bases
TTCATTTTCCTAACGAGCATTGATTCCCGCGTGCATTAGCGCTACGCTTACGCCTTTCTTGGTCGTCAACTTATTGATTT
AACAGCGGGAACCTTCGTTT

Downstream 100 bases:

>100_bases
CTTCGGGATGAGCGGCATGAGCGACAACACCTACGCGCGCGATACGTCGGCTGCGGCGGACCTGTTCGCGGCCGGCGACG
GCAACCTGTTCCAGCGCGTC

Product: ribonuclease SA

Products: NA

Alternate protein names: RNase Sa [H]

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MARKWLRNGALASVFAILAMGNIGASPGSLVSAAYAREAAAVNGAAAQVDTVPASRLPREAAATLRLIAVGGPYPYEKDG
AVFGNYERILPKMRRGYYHEYTVPTPRARNRGARRIVCGGPLRRVDNCYYTDDHYNSFKRIVD

Sequences:

>Translated_143_residues
MARKWLRNGALASVFAILAMGNIGASPGSLVSAAYAREAAAVNGAAAQVDTVPASRLPREAAATLRLIAVGGPYPYEKDG
AVFGNYERILPKMRRGYYHEYTVPTPRARNRGARRIVCGGPLRRVDNCYYTDDHYNSFKRIVD
>Mature_142_residues
ARKWLRNGALASVFAILAMGNIGASPGSLVSAAYAREAAAVNGAAAQVDTVPASRLPREAAATLRLIAVGGPYPYEKDGA
VFGNYERILPKMRRGYYHEYTVPTPRARNRGARRIVCGGPLRRVDNCYYTDDHYNSFKRIVD

Specific function: Unknown

COG id: COG4290

COG function: function code F; Guanyl-specific ribonuclease Sa

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribonuclease N1/T1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000026
- InterPro:   IPR016191 [H]

Pfam domain/function: PF00545 Ribonuclease [H]

EC number: =3.1.27.3 [H]

Molecular weight: Translated: 15649; Mature: 15518

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKWLRNGALASVFAILAMGNIGASPGSLVSAAYAREAAAVNGAAAQVDTVPASRLPRE
CCCHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCHHHCCHH
AAATLRLIAVGGPYPYEKDGAVFGNYERILPKMRRGYYHEYTVPTPRARNRGARRIVCGG
HHHEEEEEEECCCCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECC
PLRRVDNCYYTDDHYNSFKRIVD
CHHHHCCCEECCHHHHHHHHHCC
>Mature Secondary Structure 
ARKWLRNGALASVFAILAMGNIGASPGSLVSAAYAREAAAVNGAAAQVDTVPASRLPRE
CCHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCHHHCCHH
AAATLRLIAVGGPYPYEKDGAVFGNYERILPKMRRGYYHEYTVPTPRARNRGARRIVCGG
HHHEEEEEEECCCCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECC
PLRRVDNCYYTDDHYNSFKRIVD
CHHHHCCCEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3098582; 3118883; 1654932; 8396032; 9757110; 9819211; 11455593 [H]