Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is 83593977
Identifier: 83593977
GI number: 83593977
Start: 3074429
End: 3075733
Strand: Direct
Name: 83593977
Synonym: Rru_A2645
Alternate gene names: NA
Gene position: 3074429-3075733 (Clockwise)
Preceding gene: 83593976
Following gene: 83593978
Centisome position: 70.63
GC content: 72.03
Gene sequence:
>1305_bases ATGAGCATCGGTCTCGCCCTGGGCGAAGCCAATCGTCGGCTGGTCGCCCCGCTGATTCCGGCCTGCATCCTGACCGTGGT CTGCCTGTCGCTGGGCGCCGCCTGGGGCCTGCTCGCCCTGACGCCAACGGCCCTGTTGACCTGGGGCGGTCCGGGCCCCG GGGTGGCCGCCCTTCACCTGCTTGGCATCGGCGTGCTGCTGGCCACCGTCGCCCTGGTGGTGCCGCAGATCCTGCCGGTC ATCACCTTGCAAGACGCCCCCCCGGCCCCCGTCCTGACGACGATCCTTGGCCTGCTGGTCGCCGGGCTTGGGTTGCTGGC GGCGGGCTTTGCCGGCTACGACAGCCAAATCGCCCAATGGGGCACCCGGCTGCTGGCGACGGCGGTGGCCGGCTTCCTCG GCCTGTGGCTGCGCCTGCTCTGGCGCGGCCGGCGCTCGGGGCTGGCCGATGTGCTGTTGGCCAATGTGTTGGCTCTGGGC TTTCTCGGGCTGGCCGGGGGGATGGGGGCCCTGCTCGGCGCCGATTACGGCGAAGGCCTGCTGGCCGATCATCAAGCCTT TGCCCATGCCCATGGCATTATCGCCGCCTTTGGCTTCATGGGTCAGGTGGGCTTGGGGTTTTCCGGGGTGCTGGTGCCGA TGCTCGCCATCGCCGATCCGCCCGCCCGCGCCGCCACCCGCCCGGCCCTGCTGCTCGGCGCCCTGGCGGTGCTTCTGGCC GCCGGCGGCTTGGTCTTTTCTGTGCCCGCCCTGGTCTGGGCCGGGCTGGCGGCCGGCGGCGTCACCTGCTTGGCCCATCT GCGGCTGATGGCGCAGATCATGGGCCGACGCCTGCGCCCGCGCCTGGATCCGGCCTTCTGGCTGATCCGCCTGTCTTGGG GGCTGCTGCCCGCCGCCCTGGTCGCCGGAGCCGGCGCCCTGGCCGGCATCGTTTCCCCGCTGGTCATGGGCGTCTTACTG CTGCCGGGCTGGCTGCTCACCCTGCTGCTCGGCGTGCTTCAGCGCATCGTGCCCTTCCTCACCTCGATGCATACGGTCAA TAGCTGCGCCCGGCCGATCGCCATCACCCGGCTGTCCTGGCCGGCGGCCCTACCCGTCCTCGCCCTGCTCCACGTCCTGG CCTTGGCCCTGTTGCTGATCGGTGTCGGGGTCGAAGCCGCGCTGCCCATCCGGCTGGCCGGGCTGGCTGGCCTCGCCGAT AGCGCGGTGCTCGGCGCGTTCTTCGCCACCATCGCCGTCCGCGCCCTGGCCCATCGCCGCGCCGTCGGCCCCAAGCGTCC CCCTTCTCCCCCCCACCAAGGATGA
Upstream 100 bases:
>100_bases CGCCACTGTTTGAAGAACTCGAACGCCGGGGCTGGGACGCCGATGTGCTGTCGGTCGGCCTTGATGGCGCCCGGCTGCGG CTTTTTCCCGCGCGCAGGCG
Downstream 100 bases:
>100_bases CCCCCATGAGCGGCTTTTTCTCTGGCACCGCCACCGGCAGCGGCCTGCACGACGACCATCAGTCCACCCTCAAGGCGCTC GGCGCGCTCGAGGTCGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MSIGLALGEANRRLVAPLIPACILTVVCLSLGAAWGLLALTPTALLTWGGPGPGVAALHLLGIGVLLATVALVVPQILPV ITLQDAPPAPVLTTILGLLVAGLGLLAAGFAGYDSQIAQWGTRLLATAVAGFLGLWLRLLWRGRRSGLADVLLANVLALG FLGLAGGMGALLGADYGEGLLADHQAFAHAHGIIAAFGFMGQVGLGFSGVLVPMLAIADPPARAATRPALLLGALAVLLA AGGLVFSVPALVWAGLAAGGVTCLAHLRLMAQIMGRRLRPRLDPAFWLIRLSWGLLPAALVAGAGALAGIVSPLVMGVLL LPGWLLTLLLGVLQRIVPFLTSMHTVNSCARPIAITRLSWPAALPVLALLHVLALALLLIGVGVEAALPIRLAGLAGLAD SAVLGAFFATIAVRALAHRRAVGPKRPPSPPHQG
Sequences:
>Translated_434_residues MSIGLALGEANRRLVAPLIPACILTVVCLSLGAAWGLLALTPTALLTWGGPGPGVAALHLLGIGVLLATVALVVPQILPV ITLQDAPPAPVLTTILGLLVAGLGLLAAGFAGYDSQIAQWGTRLLATAVAGFLGLWLRLLWRGRRSGLADVLLANVLALG FLGLAGGMGALLGADYGEGLLADHQAFAHAHGIIAAFGFMGQVGLGFSGVLVPMLAIADPPARAATRPALLLGALAVLLA AGGLVFSVPALVWAGLAAGGVTCLAHLRLMAQIMGRRLRPRLDPAFWLIRLSWGLLPAALVAGAGALAGIVSPLVMGVLL LPGWLLTLLLGVLQRIVPFLTSMHTVNSCARPIAITRLSWPAALPVLALLHVLALALLLIGVGVEAALPIRLAGLAGLAD SAVLGAFFATIAVRALAHRRAVGPKRPPSPPHQG >Mature_433_residues SIGLALGEANRRLVAPLIPACILTVVCLSLGAAWGLLALTPTALLTWGGPGPGVAALHLLGIGVLLATVALVVPQILPVI TLQDAPPAPVLTTILGLLVAGLGLLAAGFAGYDSQIAQWGTRLLATAVAGFLGLWLRLLWRGRRSGLADVLLANVLALGF LGLAGGMGALLGADYGEGLLADHQAFAHAHGIIAAFGFMGQVGLGFSGVLVPMLAIADPPARAATRPALLLGALAVLLAA GGLVFSVPALVWAGLAAGGVTCLAHLRLMAQIMGRRLRPRLDPAFWLIRLSWGLLPAALVAGAGALAGIVSPLVMGVLLL PGWLLTLLLGVLQRIVPFLTSMHTVNSCARPIAITRLSWPAALPVLALLHVLALALLLIGVGVEAALPIRLAGLAGLADS AVLGAFFATIAVRALAHRRAVGPKRPPSPPHQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44080; Mature: 43949
Theoretical pI: Translated: 11.95; Mature: 11.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGLALGEANRRLVAPLIPACILTVVCLSLGAAWGLLALTPTALLTWGGPGPGVAALHL CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHH LGIGVLLATVALVVPQILPVITLQDAPPAPVLTTILGLLVAGLGLLAAGFAGYDSQIAQW HHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH GTRLLATAVAGFLGLWLRLLWRGRRSGLADVLLANVLALGFLGLAGGMGALLGADYGEGL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH LADHQAFAHAHGIIAAFGFMGQVGLGFSGVLVPMLAIADPPARAATRPALLLGALAVLLA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AGGLVFSVPALVWAGLAAGGVTCLAHLRLMAQIMGRRLRPRLDPAFWLIRLSWGLLPAAL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH VAGAGALAGIVSPLVMGVLLLPGWLLTLLLGVLQRIVPFLTSMHTVNSCARPIAITRLSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC PAALPVLALLHVLALALLLIGVGVEAALPIRLAGLAGLADSAVLGAFFATIAVRALAHRR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVGPKRPPSPPHQG CCCCCCCCCCCCCC >Mature Secondary Structure SIGLALGEANRRLVAPLIPACILTVVCLSLGAAWGLLALTPTALLTWGGPGPGVAALHL CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHH LGIGVLLATVALVVPQILPVITLQDAPPAPVLTTILGLLVAGLGLLAAGFAGYDSQIAQW HHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH GTRLLATAVAGFLGLWLRLLWRGRRSGLADVLLANVLALGFLGLAGGMGALLGADYGEGL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH LADHQAFAHAHGIIAAFGFMGQVGLGFSGVLVPMLAIADPPARAATRPALLLGALAVLLA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AGGLVFSVPALVWAGLAAGGVTCLAHLRLMAQIMGRRLRPRLDPAFWLIRLSWGLLPAAL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH VAGAGALAGIVSPLVMGVLLLPGWLLTLLLGVLQRIVPFLTSMHTVNSCARPIAITRLSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC PAALPVLALLHVLALALLLIGVGVEAALPIRLAGLAGLADSAVLGAFFATIAVRALAHRR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVGPKRPPSPPHQG CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA