Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is 83593969
Identifier: 83593969
GI number: 83593969
Start: 3065038
End: 3067479
Strand: Direct
Name: 83593969
Synonym: Rru_A2637
Alternate gene names: NA
Gene position: 3065038-3067479 (Clockwise)
Preceding gene: 83593968
Following gene: 83593970
Centisome position: 70.41
GC content: 62.2
Gene sequence:
>2442_bases ATGCAGTACCCCCCTTTCGAGCAGGCCAGGACATGTCCCGGATCCGGACGACTCGTCGCTTTTTCCTTCGATGTTTTTGA CACCTTTTTGCTCCGCCGCTGCACGACCCCCGAAGGCGTCTTTGAGCAGGCCTTTCGCCATGCCCCCCTGACCCTTCGGG GTGCGGGAAGGGCGACCAGTTATTGCCAGCACCGTCAAATGGCCGAGGGCAAGGCCCGCAAACGGGGAAAGCCCCCCGCC AAAGGCCGGGAAACGTCGATCGAAGACATCTACGCCCGCTTTGCCGTCCGTCCCTTTGGTTTGACCGCGGATGACCGCCC GGCTCTGGTCGCGGCGGAATTCGCCGCCGAACACGACCTATGCTTCGTCAATGAAAGCGTTCTGGCGCTGTACCGGGCTT TGCAGGCCGATGGCATCAAGGTTGGCTTCCTGTCCGACACCTATTGGAACGCCGAACGCCTTGGCGCCCTTCTGCGGCAT TGCGTTCCCGGCCTCACCTGGGATTTCCTTTATGCGTCCTGCGATCATGGCGTTGGCAAAGCCGACGGTCTGTTTGATCG CTATTTGAAAAAGCAGGGCTGGAAGCCCACAACCGTTGCCCATATCGGCGACAATCCTCAAGCCGACATTCAGGCACCCG GGGCGCTGGGAATTCAGACGTACCATTGCCCCCAATGTCCACCGGCCGATGTCGGGCTTTTCCAGCGCGAAGACCATATC TTCGAGATGATCTGCGCCGCCGATGGCGCCAGCTTGCGCCTGGACGATGGCCTGCGGACGATCCGCCGCCAGATCACCGC CATGATCCCCCATCCCTCGCCCATGGCCCGCGTGGGCGTTTCGGTGCTCGGACCGGTTTTGAGCGGCTTTCACCATTTCG TTGCCGATCGCCTCGCCAAGATCGCCCAAGACAATCCTTCGGTCCGCGTGGCATTCCTCGCCCGCGATGGCTTGGCGCCC TACCGGCTGTGGCAAGACAGCGGCAGAGAGGCCGCCTATCTCGAGATCAACCGCCGTATCGCCTTGGTCGCCGGCACCAC GGATCAAGAGTCCCTGGGCGCCCTTTTCAAGGACATGTCCCTGGTTGACGAGGCGGCGATCAGCGCCTTTTTGAAGCATT CCTCGCCCAAGATCAGCCGTTACTTCCAACGCCTTCCCAAGGGGCAATCCACGGGCCGGGCCTTCGCCGAGGCTTTGCCG AGTTTGCTGACGAGGGCCGAGACGAGGACGATTGGCCAAGCGATCCGCGCAAGGTTGATGGCCTATCTGCGCGCCGCCAT TCCTGATCTTGATCACTGTGGCGATCTGGTTCTTGTCGACCTGGGCTATTCGGGAACCATTCAGAAAGGCCTGCGCACCA TCTTTGACCAAGAGGGTCTTTCCGTTCGCTTGCATGGCCTTTATTTGATAACCAACGACGAGGCTTTCGACGAGCTACCC TCCCATGACAGCGCCGAAGGTTATCTTTCCAGCGGTGTGATGTCTCCCCGGACCAGTCTGGCCATTCTCAGAAACATCGC CTTGATCGAACAGTTCTGCGGCGCGCCGGAAGGCTCGGTCCGCGATTACCAAAACGCCGCCGTGGTTCGCGAACCCGACC CAAGAAGCGCCGAGCATCTCGCCCTTTGCGCCGAGGTCCGGGAGGGCGCTTTCGCTTTCGCCCAGCATTATGCGGCCTTG AGCACAAAGGGCTGGCCAAACCCTCTCGCCTCCCCCGATCTGGCGGCCCCGCACATCGCCGCCGTGCTGGCCCGCCTTCT GCTGCTGCCCAGCGATACGGATCTGGCGCTGTTTGGCGGGATAACCCTGGACGTCAATCTGGGCACCCAAGGCCAAGTGC CCTTGGTCGACAGCGGAACGACCCAATCCCTGCTGGCGAAGATGCCGATGGCGGGAACCTTCGGCACGACCGCGCAGATC ATGTGGATGGCCGCCAGCGCCGCCGTGATTTCGCCCGTCCATGGCCATTTCTACGCGCTGTTCGCCGCCGGACTGATGCC GGGCGATGTCGTCGGCGATGCGCCTTGTGGCGAGGTGACGGTGACGCTGGTCACCGCCGGCGGCCTGGCACAGCTGAAGA TCGCCTGCCAACGCACGGGCTTTGGCGATCTTCGCTTGCATATCCCGCTGATCACCACCAATCAGACCAGCCCCGCGATT ATGCTGCCGATGAACGAGATCGGCCGGGAAGGCATCCTTCAGGGGCTGACCCTCTCCACGGGCCCGTCCATTCGCGATGC CATGGACTCCGACACCCCCCAGGATCTGTCCACCGACGCCTTGGAGGGAAGCGATCTGGTGATAACGGGAGCGGGGTATC AGGCCAGCGGCAGCGCTCCCATCCTCCTCATCAAGGTTCCGCCCGTTTCCTCTCCTTATGCGGTCCTCACGATAACGTTA ACCCCGATCGGGGCCGGACGCTTATTGGCCTTACCGGCCTAA
Upstream 100 bases:
>100_bases CCTGCTTCAGGCCCCTCTCTCCTGCTGCGACCCTCGCCCGGAAGTGCTCCAACGGCCGGCTTCCAAGGTTCGTCGCCCGT ACCGTGATGTGAGACGCAGA
Downstream 100 bases:
>100_bases TCAGAAGCGGTCGGGCTGGATTTTGGTTGCCGCGGTCTTCCTCGAAGACCGGGGTATCGATCACACCTGGGCCGTCGGAT ACGGCACCGCCATCATGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 813; Mature: 813
Protein sequence:
>813_residues MQYPPFEQARTCPGSGRLVAFSFDVFDTFLLRRCTTPEGVFEQAFRHAPLTLRGAGRATSYCQHRQMAEGKARKRGKPPA KGRETSIEDIYARFAVRPFGLTADDRPALVAAEFAAEHDLCFVNESVLALYRALQADGIKVGFLSDTYWNAERLGALLRH CVPGLTWDFLYASCDHGVGKADGLFDRYLKKQGWKPTTVAHIGDNPQADIQAPGALGIQTYHCPQCPPADVGLFQREDHI FEMICAADGASLRLDDGLRTIRRQITAMIPHPSPMARVGVSVLGPVLSGFHHFVADRLAKIAQDNPSVRVAFLARDGLAP YRLWQDSGREAAYLEINRRIALVAGTTDQESLGALFKDMSLVDEAAISAFLKHSSPKISRYFQRLPKGQSTGRAFAEALP SLLTRAETRTIGQAIRARLMAYLRAAIPDLDHCGDLVLVDLGYSGTIQKGLRTIFDQEGLSVRLHGLYLITNDEAFDELP SHDSAEGYLSSGVMSPRTSLAILRNIALIEQFCGAPEGSVRDYQNAAVVREPDPRSAEHLALCAEVREGAFAFAQHYAAL STKGWPNPLASPDLAAPHIAAVLARLLLLPSDTDLALFGGITLDVNLGTQGQVPLVDSGTTQSLLAKMPMAGTFGTTAQI MWMAASAAVISPVHGHFYALFAAGLMPGDVVGDAPCGEVTVTLVTAGGLAQLKIACQRTGFGDLRLHIPLITTNQTSPAI MLPMNEIGREGILQGLTLSTGPSIRDAMDSDTPQDLSTDALEGSDLVITGAGYQASGSAPILLIKVPPVSSPYAVLTITL TPIGAGRLLALPA
Sequences:
>Translated_813_residues MQYPPFEQARTCPGSGRLVAFSFDVFDTFLLRRCTTPEGVFEQAFRHAPLTLRGAGRATSYCQHRQMAEGKARKRGKPPA KGRETSIEDIYARFAVRPFGLTADDRPALVAAEFAAEHDLCFVNESVLALYRALQADGIKVGFLSDTYWNAERLGALLRH CVPGLTWDFLYASCDHGVGKADGLFDRYLKKQGWKPTTVAHIGDNPQADIQAPGALGIQTYHCPQCPPADVGLFQREDHI FEMICAADGASLRLDDGLRTIRRQITAMIPHPSPMARVGVSVLGPVLSGFHHFVADRLAKIAQDNPSVRVAFLARDGLAP YRLWQDSGREAAYLEINRRIALVAGTTDQESLGALFKDMSLVDEAAISAFLKHSSPKISRYFQRLPKGQSTGRAFAEALP SLLTRAETRTIGQAIRARLMAYLRAAIPDLDHCGDLVLVDLGYSGTIQKGLRTIFDQEGLSVRLHGLYLITNDEAFDELP SHDSAEGYLSSGVMSPRTSLAILRNIALIEQFCGAPEGSVRDYQNAAVVREPDPRSAEHLALCAEVREGAFAFAQHYAAL STKGWPNPLASPDLAAPHIAAVLARLLLLPSDTDLALFGGITLDVNLGTQGQVPLVDSGTTQSLLAKMPMAGTFGTTAQI MWMAASAAVISPVHGHFYALFAAGLMPGDVVGDAPCGEVTVTLVTAGGLAQLKIACQRTGFGDLRLHIPLITTNQTSPAI MLPMNEIGREGILQGLTLSTGPSIRDAMDSDTPQDLSTDALEGSDLVITGAGYQASGSAPILLIKVPPVSSPYAVLTITL TPIGAGRLLALPA >Mature_813_residues MQYPPFEQARTCPGSGRLVAFSFDVFDTFLLRRCTTPEGVFEQAFRHAPLTLRGAGRATSYCQHRQMAEGKARKRGKPPA KGRETSIEDIYARFAVRPFGLTADDRPALVAAEFAAEHDLCFVNESVLALYRALQADGIKVGFLSDTYWNAERLGALLRH CVPGLTWDFLYASCDHGVGKADGLFDRYLKKQGWKPTTVAHIGDNPQADIQAPGALGIQTYHCPQCPPADVGLFQREDHI FEMICAADGASLRLDDGLRTIRRQITAMIPHPSPMARVGVSVLGPVLSGFHHFVADRLAKIAQDNPSVRVAFLARDGLAP YRLWQDSGREAAYLEINRRIALVAGTTDQESLGALFKDMSLVDEAAISAFLKHSSPKISRYFQRLPKGQSTGRAFAEALP SLLTRAETRTIGQAIRARLMAYLRAAIPDLDHCGDLVLVDLGYSGTIQKGLRTIFDQEGLSVRLHGLYLITNDEAFDELP SHDSAEGYLSSGVMSPRTSLAILRNIALIEQFCGAPEGSVRDYQNAAVVREPDPRSAEHLALCAEVREGAFAFAQHYAAL STKGWPNPLASPDLAAPHIAAVLARLLLLPSDTDLALFGGITLDVNLGTQGQVPLVDSGTTQSLLAKMPMAGTFGTTAQI MWMAASAAVISPVHGHFYALFAAGLMPGDVVGDAPCGEVTVTLVTAGGLAQLKIACQRTGFGDLRLHIPLITTNQTSPAI MLPMNEIGREGILQGLTLSTGPSIRDAMDSDTPQDLSTDALEGSDLVITGAGYQASGSAPILLIKVPPVSSPYAVLTITL TPIGAGRLLALPA
Specific function: Unknown
COG id: COG5610
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87312; Mature: 87312
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYPPFEQARTCPGSGRLVAFSFDVFDTFLLRRCTTPEGVFEQAFRHAPLTLRGAGRATS CCCCCCCHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCHHH YCQHRQMAEGKARKRGKPPAKGRETSIEDIYARFAVRPFGLTADDRPALVAAEFAAEHDL HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEHHHCCCCE CFVNESVLALYRALQADGIKVGFLSDTYWNAERLGALLRHCVPGLTWDFLYASCDHGVGK EEECHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC ADGLFDRYLKKQGWKPTTVAHIGDNPQADIQAPGALGIQTYHCPQCPPADVGLFQREDHI CCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHH FEMICAADGASLRLDDGLRTIRRQITAMIPHPSPMARVGVSVLGPVLSGFHHFVADRLAK HHHHHHCCCCCEEEHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IAQDNPSVRVAFLARDGLAPYRLWQDSGREAAYLEINRRIALVAGTTDQESLGALFKDMS HHCCCCCEEEEEEECCCCCHHHHHHCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHH LVDEAAISAFLKHSSPKISRYFQRLPKGQSTGRAFAEALPSLLTRAETRTIGQAIRARLM HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYLRAAIPDLDHCGDLVLVDLGYSGTIQKGLRTIFDQEGLSVRLHGLYLITNDEAFDELP HHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEEEEECCHHHHHCC SHDSAEGYLSSGVMSPRTSLAILRNIALIEQFCGAPEGSVRDYQNAAVVREPDPRSAEHL CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEECCCCCCHHHH ALCAEVREGAFAFAQHYAALSTKGWPNPLASPDLAAPHIAAVLARLLLLPSDTDLALFGG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECC ITLDVNLGTQGQVPLVDSGTTQSLLAKMPMAGTFGTTAQIMWMAASAAVISPVHGHFYAL EEEEEECCCCCCCEEECCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH FAAGLMPGDVVGDAPCGEVTVTLVTAGGLAQLKIACQRTGFGDLRLHIPLITTNQTSPAI HHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCEE MLPMNEIGREGILQGLTLSTGPSIRDAMDSDTPQDLSTDALEGSDLVITGAGYQASGSAP EECHHHHCHHHHHCCCEECCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC ILLIKVPPVSSPYAVLTITLTPIGAGRLLALPA EEEEECCCCCCCCEEEEEEEECCCCCCEEECCC >Mature Secondary Structure MQYPPFEQARTCPGSGRLVAFSFDVFDTFLLRRCTTPEGVFEQAFRHAPLTLRGAGRATS CCCCCCCHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCHHH YCQHRQMAEGKARKRGKPPAKGRETSIEDIYARFAVRPFGLTADDRPALVAAEFAAEHDL HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEHHHCCCCE CFVNESVLALYRALQADGIKVGFLSDTYWNAERLGALLRHCVPGLTWDFLYASCDHGVGK EEECHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC ADGLFDRYLKKQGWKPTTVAHIGDNPQADIQAPGALGIQTYHCPQCPPADVGLFQREDHI CCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHH FEMICAADGASLRLDDGLRTIRRQITAMIPHPSPMARVGVSVLGPVLSGFHHFVADRLAK HHHHHHCCCCCEEEHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IAQDNPSVRVAFLARDGLAPYRLWQDSGREAAYLEINRRIALVAGTTDQESLGALFKDMS HHCCCCCEEEEEEECCCCCHHHHHHCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHH LVDEAAISAFLKHSSPKISRYFQRLPKGQSTGRAFAEALPSLLTRAETRTIGQAIRARLM HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYLRAAIPDLDHCGDLVLVDLGYSGTIQKGLRTIFDQEGLSVRLHGLYLITNDEAFDELP HHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEEEEECCHHHHHCC SHDSAEGYLSSGVMSPRTSLAILRNIALIEQFCGAPEGSVRDYQNAAVVREPDPRSAEHL CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEECCCCCCHHHH ALCAEVREGAFAFAQHYAALSTKGWPNPLASPDLAAPHIAAVLARLLLLPSDTDLALFGG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECC ITLDVNLGTQGQVPLVDSGTTQSLLAKMPMAGTFGTTAQIMWMAASAAVISPVHGHFYAL EEEEEECCCCCCCEEECCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH FAAGLMPGDVVGDAPCGEVTVTLVTAGGLAQLKIACQRTGFGDLRLHIPLITTNQTSPAI HHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCEE MLPMNEIGREGILQGLTLSTGPSIRDAMDSDTPQDLSTDALEGSDLVITGAGYQASGSAP EECHHHHCHHHHHCCCEECCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC ILLIKVPPVSSPYAVLTITLTPIGAGRLLALPA EEEEECCCCCCCCEEEEEEEECCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA