Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

Click here to switch to the map view.

The map label for this gene is 83593969

Identifier: 83593969

GI number: 83593969

Start: 3065038

End: 3067479

Strand: Direct

Name: 83593969

Synonym: Rru_A2637

Alternate gene names: NA

Gene position: 3065038-3067479 (Clockwise)

Preceding gene: 83593968

Following gene: 83593970

Centisome position: 70.41

GC content: 62.2

Gene sequence:

>2442_bases
ATGCAGTACCCCCCTTTCGAGCAGGCCAGGACATGTCCCGGATCCGGACGACTCGTCGCTTTTTCCTTCGATGTTTTTGA
CACCTTTTTGCTCCGCCGCTGCACGACCCCCGAAGGCGTCTTTGAGCAGGCCTTTCGCCATGCCCCCCTGACCCTTCGGG
GTGCGGGAAGGGCGACCAGTTATTGCCAGCACCGTCAAATGGCCGAGGGCAAGGCCCGCAAACGGGGAAAGCCCCCCGCC
AAAGGCCGGGAAACGTCGATCGAAGACATCTACGCCCGCTTTGCCGTCCGTCCCTTTGGTTTGACCGCGGATGACCGCCC
GGCTCTGGTCGCGGCGGAATTCGCCGCCGAACACGACCTATGCTTCGTCAATGAAAGCGTTCTGGCGCTGTACCGGGCTT
TGCAGGCCGATGGCATCAAGGTTGGCTTCCTGTCCGACACCTATTGGAACGCCGAACGCCTTGGCGCCCTTCTGCGGCAT
TGCGTTCCCGGCCTCACCTGGGATTTCCTTTATGCGTCCTGCGATCATGGCGTTGGCAAAGCCGACGGTCTGTTTGATCG
CTATTTGAAAAAGCAGGGCTGGAAGCCCACAACCGTTGCCCATATCGGCGACAATCCTCAAGCCGACATTCAGGCACCCG
GGGCGCTGGGAATTCAGACGTACCATTGCCCCCAATGTCCACCGGCCGATGTCGGGCTTTTCCAGCGCGAAGACCATATC
TTCGAGATGATCTGCGCCGCCGATGGCGCCAGCTTGCGCCTGGACGATGGCCTGCGGACGATCCGCCGCCAGATCACCGC
CATGATCCCCCATCCCTCGCCCATGGCCCGCGTGGGCGTTTCGGTGCTCGGACCGGTTTTGAGCGGCTTTCACCATTTCG
TTGCCGATCGCCTCGCCAAGATCGCCCAAGACAATCCTTCGGTCCGCGTGGCATTCCTCGCCCGCGATGGCTTGGCGCCC
TACCGGCTGTGGCAAGACAGCGGCAGAGAGGCCGCCTATCTCGAGATCAACCGCCGTATCGCCTTGGTCGCCGGCACCAC
GGATCAAGAGTCCCTGGGCGCCCTTTTCAAGGACATGTCCCTGGTTGACGAGGCGGCGATCAGCGCCTTTTTGAAGCATT
CCTCGCCCAAGATCAGCCGTTACTTCCAACGCCTTCCCAAGGGGCAATCCACGGGCCGGGCCTTCGCCGAGGCTTTGCCG
AGTTTGCTGACGAGGGCCGAGACGAGGACGATTGGCCAAGCGATCCGCGCAAGGTTGATGGCCTATCTGCGCGCCGCCAT
TCCTGATCTTGATCACTGTGGCGATCTGGTTCTTGTCGACCTGGGCTATTCGGGAACCATTCAGAAAGGCCTGCGCACCA
TCTTTGACCAAGAGGGTCTTTCCGTTCGCTTGCATGGCCTTTATTTGATAACCAACGACGAGGCTTTCGACGAGCTACCC
TCCCATGACAGCGCCGAAGGTTATCTTTCCAGCGGTGTGATGTCTCCCCGGACCAGTCTGGCCATTCTCAGAAACATCGC
CTTGATCGAACAGTTCTGCGGCGCGCCGGAAGGCTCGGTCCGCGATTACCAAAACGCCGCCGTGGTTCGCGAACCCGACC
CAAGAAGCGCCGAGCATCTCGCCCTTTGCGCCGAGGTCCGGGAGGGCGCTTTCGCTTTCGCCCAGCATTATGCGGCCTTG
AGCACAAAGGGCTGGCCAAACCCTCTCGCCTCCCCCGATCTGGCGGCCCCGCACATCGCCGCCGTGCTGGCCCGCCTTCT
GCTGCTGCCCAGCGATACGGATCTGGCGCTGTTTGGCGGGATAACCCTGGACGTCAATCTGGGCACCCAAGGCCAAGTGC
CCTTGGTCGACAGCGGAACGACCCAATCCCTGCTGGCGAAGATGCCGATGGCGGGAACCTTCGGCACGACCGCGCAGATC
ATGTGGATGGCCGCCAGCGCCGCCGTGATTTCGCCCGTCCATGGCCATTTCTACGCGCTGTTCGCCGCCGGACTGATGCC
GGGCGATGTCGTCGGCGATGCGCCTTGTGGCGAGGTGACGGTGACGCTGGTCACCGCCGGCGGCCTGGCACAGCTGAAGA
TCGCCTGCCAACGCACGGGCTTTGGCGATCTTCGCTTGCATATCCCGCTGATCACCACCAATCAGACCAGCCCCGCGATT
ATGCTGCCGATGAACGAGATCGGCCGGGAAGGCATCCTTCAGGGGCTGACCCTCTCCACGGGCCCGTCCATTCGCGATGC
CATGGACTCCGACACCCCCCAGGATCTGTCCACCGACGCCTTGGAGGGAAGCGATCTGGTGATAACGGGAGCGGGGTATC
AGGCCAGCGGCAGCGCTCCCATCCTCCTCATCAAGGTTCCGCCCGTTTCCTCTCCTTATGCGGTCCTCACGATAACGTTA
ACCCCGATCGGGGCCGGACGCTTATTGGCCTTACCGGCCTAA

Upstream 100 bases:

>100_bases
CCTGCTTCAGGCCCCTCTCTCCTGCTGCGACCCTCGCCCGGAAGTGCTCCAACGGCCGGCTTCCAAGGTTCGTCGCCCGT
ACCGTGATGTGAGACGCAGA

Downstream 100 bases:

>100_bases
TCAGAAGCGGTCGGGCTGGATTTTGGTTGCCGCGGTCTTCCTCGAAGACCGGGGTATCGATCACACCTGGGCCGTCGGAT
ACGGCACCGCCATCATGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 813; Mature: 813

Protein sequence:

>813_residues
MQYPPFEQARTCPGSGRLVAFSFDVFDTFLLRRCTTPEGVFEQAFRHAPLTLRGAGRATSYCQHRQMAEGKARKRGKPPA
KGRETSIEDIYARFAVRPFGLTADDRPALVAAEFAAEHDLCFVNESVLALYRALQADGIKVGFLSDTYWNAERLGALLRH
CVPGLTWDFLYASCDHGVGKADGLFDRYLKKQGWKPTTVAHIGDNPQADIQAPGALGIQTYHCPQCPPADVGLFQREDHI
FEMICAADGASLRLDDGLRTIRRQITAMIPHPSPMARVGVSVLGPVLSGFHHFVADRLAKIAQDNPSVRVAFLARDGLAP
YRLWQDSGREAAYLEINRRIALVAGTTDQESLGALFKDMSLVDEAAISAFLKHSSPKISRYFQRLPKGQSTGRAFAEALP
SLLTRAETRTIGQAIRARLMAYLRAAIPDLDHCGDLVLVDLGYSGTIQKGLRTIFDQEGLSVRLHGLYLITNDEAFDELP
SHDSAEGYLSSGVMSPRTSLAILRNIALIEQFCGAPEGSVRDYQNAAVVREPDPRSAEHLALCAEVREGAFAFAQHYAAL
STKGWPNPLASPDLAAPHIAAVLARLLLLPSDTDLALFGGITLDVNLGTQGQVPLVDSGTTQSLLAKMPMAGTFGTTAQI
MWMAASAAVISPVHGHFYALFAAGLMPGDVVGDAPCGEVTVTLVTAGGLAQLKIACQRTGFGDLRLHIPLITTNQTSPAI
MLPMNEIGREGILQGLTLSTGPSIRDAMDSDTPQDLSTDALEGSDLVITGAGYQASGSAPILLIKVPPVSSPYAVLTITL
TPIGAGRLLALPA

Sequences:

>Translated_813_residues
MQYPPFEQARTCPGSGRLVAFSFDVFDTFLLRRCTTPEGVFEQAFRHAPLTLRGAGRATSYCQHRQMAEGKARKRGKPPA
KGRETSIEDIYARFAVRPFGLTADDRPALVAAEFAAEHDLCFVNESVLALYRALQADGIKVGFLSDTYWNAERLGALLRH
CVPGLTWDFLYASCDHGVGKADGLFDRYLKKQGWKPTTVAHIGDNPQADIQAPGALGIQTYHCPQCPPADVGLFQREDHI
FEMICAADGASLRLDDGLRTIRRQITAMIPHPSPMARVGVSVLGPVLSGFHHFVADRLAKIAQDNPSVRVAFLARDGLAP
YRLWQDSGREAAYLEINRRIALVAGTTDQESLGALFKDMSLVDEAAISAFLKHSSPKISRYFQRLPKGQSTGRAFAEALP
SLLTRAETRTIGQAIRARLMAYLRAAIPDLDHCGDLVLVDLGYSGTIQKGLRTIFDQEGLSVRLHGLYLITNDEAFDELP
SHDSAEGYLSSGVMSPRTSLAILRNIALIEQFCGAPEGSVRDYQNAAVVREPDPRSAEHLALCAEVREGAFAFAQHYAAL
STKGWPNPLASPDLAAPHIAAVLARLLLLPSDTDLALFGGITLDVNLGTQGQVPLVDSGTTQSLLAKMPMAGTFGTTAQI
MWMAASAAVISPVHGHFYALFAAGLMPGDVVGDAPCGEVTVTLVTAGGLAQLKIACQRTGFGDLRLHIPLITTNQTSPAI
MLPMNEIGREGILQGLTLSTGPSIRDAMDSDTPQDLSTDALEGSDLVITGAGYQASGSAPILLIKVPPVSSPYAVLTITL
TPIGAGRLLALPA
>Mature_813_residues
MQYPPFEQARTCPGSGRLVAFSFDVFDTFLLRRCTTPEGVFEQAFRHAPLTLRGAGRATSYCQHRQMAEGKARKRGKPPA
KGRETSIEDIYARFAVRPFGLTADDRPALVAAEFAAEHDLCFVNESVLALYRALQADGIKVGFLSDTYWNAERLGALLRH
CVPGLTWDFLYASCDHGVGKADGLFDRYLKKQGWKPTTVAHIGDNPQADIQAPGALGIQTYHCPQCPPADVGLFQREDHI
FEMICAADGASLRLDDGLRTIRRQITAMIPHPSPMARVGVSVLGPVLSGFHHFVADRLAKIAQDNPSVRVAFLARDGLAP
YRLWQDSGREAAYLEINRRIALVAGTTDQESLGALFKDMSLVDEAAISAFLKHSSPKISRYFQRLPKGQSTGRAFAEALP
SLLTRAETRTIGQAIRARLMAYLRAAIPDLDHCGDLVLVDLGYSGTIQKGLRTIFDQEGLSVRLHGLYLITNDEAFDELP
SHDSAEGYLSSGVMSPRTSLAILRNIALIEQFCGAPEGSVRDYQNAAVVREPDPRSAEHLALCAEVREGAFAFAQHYAAL
STKGWPNPLASPDLAAPHIAAVLARLLLLPSDTDLALFGGITLDVNLGTQGQVPLVDSGTTQSLLAKMPMAGTFGTTAQI
MWMAASAAVISPVHGHFYALFAAGLMPGDVVGDAPCGEVTVTLVTAGGLAQLKIACQRTGFGDLRLHIPLITTNQTSPAI
MLPMNEIGREGILQGLTLSTGPSIRDAMDSDTPQDLSTDALEGSDLVITGAGYQASGSAPILLIKVPPVSSPYAVLTITL
TPIGAGRLLALPA

Specific function: Unknown

COG id: COG5610

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87312; Mature: 87312

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYPPFEQARTCPGSGRLVAFSFDVFDTFLLRRCTTPEGVFEQAFRHAPLTLRGAGRATS
CCCCCCCHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCHHH
YCQHRQMAEGKARKRGKPPAKGRETSIEDIYARFAVRPFGLTADDRPALVAAEFAAEHDL
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEHHHCCCCE
CFVNESVLALYRALQADGIKVGFLSDTYWNAERLGALLRHCVPGLTWDFLYASCDHGVGK
EEECHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC
ADGLFDRYLKKQGWKPTTVAHIGDNPQADIQAPGALGIQTYHCPQCPPADVGLFQREDHI
CCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHH
FEMICAADGASLRLDDGLRTIRRQITAMIPHPSPMARVGVSVLGPVLSGFHHFVADRLAK
HHHHHHCCCCCEEEHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAQDNPSVRVAFLARDGLAPYRLWQDSGREAAYLEINRRIALVAGTTDQESLGALFKDMS
HHCCCCCEEEEEEECCCCCHHHHHHCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHH
LVDEAAISAFLKHSSPKISRYFQRLPKGQSTGRAFAEALPSLLTRAETRTIGQAIRARLM
HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYLRAAIPDLDHCGDLVLVDLGYSGTIQKGLRTIFDQEGLSVRLHGLYLITNDEAFDELP
HHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEEEEECCHHHHHCC
SHDSAEGYLSSGVMSPRTSLAILRNIALIEQFCGAPEGSVRDYQNAAVVREPDPRSAEHL
CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEECCCCCCHHHH
ALCAEVREGAFAFAQHYAALSTKGWPNPLASPDLAAPHIAAVLARLLLLPSDTDLALFGG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECC
ITLDVNLGTQGQVPLVDSGTTQSLLAKMPMAGTFGTTAQIMWMAASAAVISPVHGHFYAL
EEEEEECCCCCCCEEECCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
FAAGLMPGDVVGDAPCGEVTVTLVTAGGLAQLKIACQRTGFGDLRLHIPLITTNQTSPAI
HHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCEE
MLPMNEIGREGILQGLTLSTGPSIRDAMDSDTPQDLSTDALEGSDLVITGAGYQASGSAP
EECHHHHCHHHHHCCCEECCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
ILLIKVPPVSSPYAVLTITLTPIGAGRLLALPA
EEEEECCCCCCCCEEEEEEEECCCCCCEEECCC
>Mature Secondary Structure
MQYPPFEQARTCPGSGRLVAFSFDVFDTFLLRRCTTPEGVFEQAFRHAPLTLRGAGRATS
CCCCCCCHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCHHH
YCQHRQMAEGKARKRGKPPAKGRETSIEDIYARFAVRPFGLTADDRPALVAAEFAAEHDL
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEHHHCCCCE
CFVNESVLALYRALQADGIKVGFLSDTYWNAERLGALLRHCVPGLTWDFLYASCDHGVGK
EEECHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC
ADGLFDRYLKKQGWKPTTVAHIGDNPQADIQAPGALGIQTYHCPQCPPADVGLFQREDHI
CCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHH
FEMICAADGASLRLDDGLRTIRRQITAMIPHPSPMARVGVSVLGPVLSGFHHFVADRLAK
HHHHHHCCCCCEEEHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAQDNPSVRVAFLARDGLAPYRLWQDSGREAAYLEINRRIALVAGTTDQESLGALFKDMS
HHCCCCCEEEEEEECCCCCHHHHHHCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHH
LVDEAAISAFLKHSSPKISRYFQRLPKGQSTGRAFAEALPSLLTRAETRTIGQAIRARLM
HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYLRAAIPDLDHCGDLVLVDLGYSGTIQKGLRTIFDQEGLSVRLHGLYLITNDEAFDELP
HHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEEEEECCHHHHHCC
SHDSAEGYLSSGVMSPRTSLAILRNIALIEQFCGAPEGSVRDYQNAAVVREPDPRSAEHL
CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEECCCCCCHHHH
ALCAEVREGAFAFAQHYAALSTKGWPNPLASPDLAAPHIAAVLARLLLLPSDTDLALFGG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECC
ITLDVNLGTQGQVPLVDSGTTQSLLAKMPMAGTFGTTAQIMWMAASAAVISPVHGHFYAL
EEEEEECCCCCCCEEECCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
FAAGLMPGDVVGDAPCGEVTVTLVTAGGLAQLKIACQRTGFGDLRLHIPLITTNQTSPAI
HHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCEE
MLPMNEIGREGILQGLTLSTGPSIRDAMDSDTPQDLSTDALEGSDLVITGAGYQASGSAP
EECHHHHCHHHHHCCCEECCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
ILLIKVPPVSSPYAVLTITLTPIGAGRLLALPA
EEEEECCCCCCCCEEEEEEEECCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA