Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is 83593896
Identifier: 83593896
GI number: 83593896
Start: 2981867
End: 2983303
Strand: Direct
Name: 83593896
Synonym: Rru_A2561
Alternate gene names: NA
Gene position: 2981867-2983303 (Clockwise)
Preceding gene: 83593895
Following gene: 83593897
Centisome position: 68.5
GC content: 70.7
Gene sequence:
>1437_bases GTGATCCCCGTCGCCGGCGTAAGCCTTTTGACCGCCACGGTTCTTACCCTGGCGGTTTCCCTGGGGGCGCCCGCGTCCCT GACCTGGGGGACGGGCCTCGCCCTCGCCCTTTATATCCTGAGCGTCTGGGGCCGCATGCGCAGGGCGGCCCGCTTCTACA TCCTGGCCGCCATCGCCGCCTCCGCCCTGGCCGCCGCCGTCGGCAAGCTTGACCCCGAGGCGTTGCGCCGGGCCATCGCG GCGATGGGCTTCGTCGCCACGCTGTTCGTGTCCTTTGGCGTGCTGCGCGAGGCGGCCTTGACCTCGCCGCTGGTGCGACG CTGCGGACGTTTTCTGGCCCACCGGCCGCCGGGCTGGCGCTATCTGGCGCTGACCCTGGGCGGCCATCTGTTCGGCATGA TCTTGAACTTCGGGGTGATCCCGCTGCTCGGCACCATGGTGACCGAGGGCACGCGGGCGGCCGACCATCCCGAAGAGGAT GCCGATCAGGCGCGGCGCGCCACGGTCAGGCGGTTGCGCATGACCCAGGCCATCCACCGGGGCTTCGCCGCGACCCTGAC CTGGTCGCCGCTGACCGTCAGTCTGGCGGTGATCCTGACCGCGCTACCCTCGCTATCGTGGAGCGCGGCGGCGCCGGCCA TGCTCGCCGCCGCCGCTGGCTTCGTCGCCATCGGTTGGGTGATGGACCGCTTCTCGCGCGCCCGCCTGCGCGTCGCCCCG CCGCCGGCCAGCCCGGAAGAGGAACAGGGATCCTGGGCGCTGGTGCTGCCGGTGCTCGCCCTGGTCGGCGCCATTCTGGG GGTGGGCTGGCTGATGGAGGAAGTTTTTGGTATCCGGCTGGTCATCGGCGTCATGCTGTTCGTGCCGCTGCTCGCCGCCG CCTGGATCGTTCTGCAAGACAGCGCCGTTCTTGGCTTCGGTCTGGCGCTGAGCGATACGGCCACCCGCCTGGGTCATTAC GTGCGCGACACCCTGCCCGCCTATAACGGCGAACTGGCGATCGTCGGTTCGGCCAGCTTCATCGGCGGGGTGGTGACCGG GCTGCTCCATGCCGACGCCGTGCCGGGCCTGCTGGCCGGCATCGGCCTGCCGTCTTGGGCGCTGATGGCCATTGTGCCCT GGCTGGCCATCGCCTTTGGTCAGATCGGCATGAGCCCGGTGCTGGCGATCTCGCTGCTGGCCGCCGCCATCCCCTCGCCC GAGAGTCTTGGCCTGCCCGCTCCGGTGATGGCCGTCACTTATAGCGGGTCGTGGGCGCTGATGGCCGCCTCGTCGCCGTT TACCGCGGCGGTGGCGCTTTCGGCGCGGGTCGCCACCGCGCCGGGCCGGCCGGTGGGGGCGGCGGCTTTCGGGGCGCGCG ACAACGGCGGCTTCACCGTGGTCTGCGCCTTGGCCCTATCGCTCTACGTCATCGCCCTGACCAGACTTATGGCATAG
Upstream 100 bases:
>100_bases TCAAGGGCGTGATGCTCGGCGGTGGCGCCCAGACCGTCAGCGTGGCGGTGACGCTGCGCCCCAGGACCAACGGCCCGCGG GCGCGGACGGAAAGCCCGGC
Downstream 100 bases:
>100_bases GCCCTTTGCCTGAGGCCGAACACGCAAGCAGCACTTGCCGCGCCGGGGGGCTAGGCCTATAAATCAACAAGCGGGGTTTG CCCGGCTTCCGGCAGGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MIPVAGVSLLTATVLTLAVSLGAPASLTWGTGLALALYILSVWGRMRRAARFYILAAIAASALAAAVGKLDPEALRRAIA AMGFVATLFVSFGVLREAALTSPLVRRCGRFLAHRPPGWRYLALTLGGHLFGMILNFGVIPLLGTMVTEGTRAADHPEED ADQARRATVRRLRMTQAIHRGFAATLTWSPLTVSLAVILTALPSLSWSAAAPAMLAAAAGFVAIGWVMDRFSRARLRVAP PPASPEEEQGSWALVLPVLALVGAILGVGWLMEEVFGIRLVIGVMLFVPLLAAAWIVLQDSAVLGFGLALSDTATRLGHY VRDTLPAYNGELAIVGSASFIGGVVTGLLHADAVPGLLAGIGLPSWALMAIVPWLAIAFGQIGMSPVLAISLLAAAIPSP ESLGLPAPVMAVTYSGSWALMAASSPFTAAVALSARVATAPGRPVGAAAFGARDNGGFTVVCALALSLYVIALTRLMA
Sequences:
>Translated_478_residues MIPVAGVSLLTATVLTLAVSLGAPASLTWGTGLALALYILSVWGRMRRAARFYILAAIAASALAAAVGKLDPEALRRAIA AMGFVATLFVSFGVLREAALTSPLVRRCGRFLAHRPPGWRYLALTLGGHLFGMILNFGVIPLLGTMVTEGTRAADHPEED ADQARRATVRRLRMTQAIHRGFAATLTWSPLTVSLAVILTALPSLSWSAAAPAMLAAAAGFVAIGWVMDRFSRARLRVAP PPASPEEEQGSWALVLPVLALVGAILGVGWLMEEVFGIRLVIGVMLFVPLLAAAWIVLQDSAVLGFGLALSDTATRLGHY VRDTLPAYNGELAIVGSASFIGGVVTGLLHADAVPGLLAGIGLPSWALMAIVPWLAIAFGQIGMSPVLAISLLAAAIPSP ESLGLPAPVMAVTYSGSWALMAASSPFTAAVALSARVATAPGRPVGAAAFGARDNGGFTVVCALALSLYVIALTRLMA >Mature_478_residues MIPVAGVSLLTATVLTLAVSLGAPASLTWGTGLALALYILSVWGRMRRAARFYILAAIAASALAAAVGKLDPEALRRAIA AMGFVATLFVSFGVLREAALTSPLVRRCGRFLAHRPPGWRYLALTLGGHLFGMILNFGVIPLLGTMVTEGTRAADHPEED ADQARRATVRRLRMTQAIHRGFAATLTWSPLTVSLAVILTALPSLSWSAAAPAMLAAAAGFVAIGWVMDRFSRARLRVAP PPASPEEEQGSWALVLPVLALVGAILGVGWLMEEVFGIRLVIGVMLFVPLLAAAWIVLQDSAVLGFGLALSDTATRLGHY VRDTLPAYNGELAIVGSASFIGGVVTGLLHADAVPGLLAGIGLPSWALMAIVPWLAIAFGQIGMSPVLAISLLAAAIPSP ESLGLPAPVMAVTYSGSWALMAASSPFTAAVALSARVATAPGRPVGAAAFGARDNGGFTVVCALALSLYVIALTRLMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49460; Mature: 49460
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPVAGVSLLTATVLTLAVSLGAPASLTWGTGLALALYILSVWGRMRRAARFYILAAIAA CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SALAAAVGKLDPEALRRAIAAMGFVATLFVSFGVLREAALTSPLVRRCGRFLAHRPPGWR HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE YLALTLGGHLFGMILNFGVIPLLGTMVTEGTRAADHPEEDADQARRATVRRLRMTQAIHR EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC GFAATLTWSPLTVSLAVILTALPSLSWSAAAPAMLAAAAGFVAIGWVMDRFSRARLRVAP CHHHEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC PPASPEEEQGSWALVLPVLALVGAILGVGWLMEEVFGIRLVIGVMLFVPLLAAAWIVLQD CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SAVLGFGLALSDTATRLGHYVRDTLPAYNGELAIVGSASFIGGVVTGLLHADAVPGLLAG CHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH IGLPSWALMAIVPWLAIAFGQIGMSPVLAISLLAAAIPSPESLGLPAPVMAVTYSGSWAL CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEE MAASSPFTAAVALSARVATAPGRPVGAAAFGARDNGGFTVVCALALSLYVIALTRLMA EECCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MIPVAGVSLLTATVLTLAVSLGAPASLTWGTGLALALYILSVWGRMRRAARFYILAAIAA CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SALAAAVGKLDPEALRRAIAAMGFVATLFVSFGVLREAALTSPLVRRCGRFLAHRPPGWR HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE YLALTLGGHLFGMILNFGVIPLLGTMVTEGTRAADHPEEDADQARRATVRRLRMTQAIHR EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC GFAATLTWSPLTVSLAVILTALPSLSWSAAAPAMLAAAAGFVAIGWVMDRFSRARLRVAP CHHHEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC PPASPEEEQGSWALVLPVLALVGAILGVGWLMEEVFGIRLVIGVMLFVPLLAAAWIVLQD CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SAVLGFGLALSDTATRLGHYVRDTLPAYNGELAIVGSASFIGGVVTGLLHADAVPGLLAG CHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH IGLPSWALMAIVPWLAIAFGQIGMSPVLAISLLAAAIPSPESLGLPAPVMAVTYSGSWAL CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEE MAASSPFTAAVALSARVATAPGRPVGAAAFGARDNGGFTVVCALALSLYVIALTRLMA EECCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA