Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is 83593882
Identifier: 83593882
GI number: 83593882
Start: 2962427
End: 2963359
Strand: Direct
Name: 83593882
Synonym: Rru_A2547
Alternate gene names: NA
Gene position: 2962427-2963359 (Clockwise)
Preceding gene: 83593880
Following gene: 83593883
Centisome position: 68.06
GC content: 67.74
Gene sequence:
>933_bases GTGCTTCGCCAGTGGCACGGGCCGCGAACGCATCCTATAATCTGTCGCATGGACATCATGCCCGCCGGCTATCACGATCG CCCGCCCTACGAGGTGCTTGCCCCGCAACGGCAAACCCTGCCGCTCGTGCTCGCCTCGCCCCATTCGGGAACGCTTTACC CCGGGCCCTTCCGCGATCTCTCGGCGCTTGACGCCCAGGCGCTGCGGCGGTCGGAGGATACCTTCGTCGACGAGTTGTTC GCCCTCGCCCCCGACCTCGGGGCACCGCTGGTGCGCGCCACCTATCCAAGGGCCTATCTCGATCTCAACCGCGAGCCCTA TGAGCTCGACCCCGAGATGTTCGAAGATCCCTTGCCCGATTACGTCAACACCACCAGCCCCCGGGTGGCCGCCGGCCTGG GCACCATCGCCAAGGTGGTCGGCACGGGCAGCAACATCTATCGCGGCAAGCTGACCTTCGCCGAGGCCCAGACGCGGATC GAGGCGCTTTACCACCCCTATCACGCCGCCCTCGCCGCCCTGGTCGAGGCGACGCGCCTGCGCTTTGGCTATGCCCTCTT GCTTGATTGTCACTCGATGCCCGCGCCCTTGCAGGGCAATCCCGATCTTGCCGCGCAGATCGTGCTTGGCGACCGCCACG GCCTGACCTGCGCGCCGGCGGTCATGGAAACCGCCGAGGCGACTTTGCGCGGCGCCGGCTATCGGGTGTCGCGCAACATG CCCTATGCGGGGGGCTTCACCACCAGCCACTATGGCCGTCCGGCGGCCGGCACCCACACCCTGCAGATCGAAGTGTCGCG GCGGCTTTACATGGACGAGATCACCCGCGAGCGGTTCCCCGCCTTTGACGACCTGCGCGACAAGCTGGCCGGCCTGATCC TGGCTTTGGGCAGCCTGCCCGCCGCCTTGCTCCAGCCCCACCCCTCCTGCTGA
Upstream 100 bases:
>100_bases AGGAGGAGCTTTTAGCCTCGCTGCGGGGGCATTGCAAGCCCCTTTTTCGAGTTTTTTTCATGAAACGGTCGCTTGCGCCA AAAAGGCCGGTGATCGGGGG
Downstream 100 bases:
>100_bases GCCGGCTCGGCGCGCGGCGGACAGAAAAAGGGGCCGTGGAAAAACCACGGCCCGAGTTTAGGGAGGAAACGTCCAAGAAG CAGCTCTTGGCACAGATGCG
Product: N-formylglutamate amidohydrolase
Products: NA
Alternate protein names: N-Formylglutamate Deformylase; N-Formylglutamate Amidohydrolase Family Protein; Hydrolase; Formiminoglutamase; N-Formylglutamate Amidohydrolase Superfamily; N-Formylglutamate Amidohydrolase Family; Formylglutamate Amidohydrolase; Formiminoglutamase Protein; N-Formylglutamate Deformylase Family Protein; N-Formylglutamate Amidohydrolase Protein
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MLRQWHGPRTHPIICRMDIMPAGYHDRPPYEVLAPQRQTLPLVLASPHSGTLYPGPFRDLSALDAQALRRSEDTFVDELF ALAPDLGAPLVRATYPRAYLDLNREPYELDPEMFEDPLPDYVNTTSPRVAAGLGTIAKVVGTGSNIYRGKLTFAEAQTRI EALYHPYHAALAALVEATRLRFGYALLLDCHSMPAPLQGNPDLAAQIVLGDRHGLTCAPAVMETAEATLRGAGYRVSRNM PYAGGFTTSHYGRPAAGTHTLQIEVSRRLYMDEITRERFPAFDDLRDKLAGLILALGSLPAALLQPHPSC
Sequences:
>Translated_310_residues MLRQWHGPRTHPIICRMDIMPAGYHDRPPYEVLAPQRQTLPLVLASPHSGTLYPGPFRDLSALDAQALRRSEDTFVDELF ALAPDLGAPLVRATYPRAYLDLNREPYELDPEMFEDPLPDYVNTTSPRVAAGLGTIAKVVGTGSNIYRGKLTFAEAQTRI EALYHPYHAALAALVEATRLRFGYALLLDCHSMPAPLQGNPDLAAQIVLGDRHGLTCAPAVMETAEATLRGAGYRVSRNM PYAGGFTTSHYGRPAAGTHTLQIEVSRRLYMDEITRERFPAFDDLRDKLAGLILALGSLPAALLQPHPSC >Mature_310_residues MLRQWHGPRTHPIICRMDIMPAGYHDRPPYEVLAPQRQTLPLVLASPHSGTLYPGPFRDLSALDAQALRRSEDTFVDELF ALAPDLGAPLVRATYPRAYLDLNREPYELDPEMFEDPLPDYVNTTSPRVAAGLGTIAKVVGTGSNIYRGKLTFAEAQTRI EALYHPYHAALAALVEATRLRFGYALLLDCHSMPAPLQGNPDLAAQIVLGDRHGLTCAPAVMETAEATLRGAGYRVSRNM PYAGGFTTSHYGRPAAGTHTLQIEVSRRLYMDEITRERFPAFDDLRDKLAGLILALGSLPAALLQPHPSC
Specific function: Unknown
COG id: COG3741
COG function: function code E; N-formylglutamate amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34095; Mature: 34095
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRQWHGPRTHPIICRMDIMPAGYHDRPPYEVLAPQRQTLPLVLASPHSGTLYPGPFRDL CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCCCCCHH SALDAQALRRSEDTFVDELFALAPDLGAPLVRATYPRAYLDLNREPYELDPEMFEDPLPD HHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHCCCHHEEECCCCCCCCCHHHHHCCCCC YVNTTSPRVAAGLGTIAKVVGTGSNIYRGKLTFAEAQTRIEALYHPYHAALAALVEATRL HHCCCCCHHHHHHHHHHHHHCCCCCEEECEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFGYALLLDCHSMPAPLQGNPDLAAQIVLGDRHGLTCAPAVMETAEATLRGAGYRVSRNM HHCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHCCCEEEECCC PYAGGFTTSHYGRPAAGTHTLQIEVSRRLYMDEITRERFPAFDDLRDKLAGLILALGSLP CCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC AALLQPHPSC HHHHCCCCCC >Mature Secondary Structure MLRQWHGPRTHPIICRMDIMPAGYHDRPPYEVLAPQRQTLPLVLASPHSGTLYPGPFRDL CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCCCCCHH SALDAQALRRSEDTFVDELFALAPDLGAPLVRATYPRAYLDLNREPYELDPEMFEDPLPD HHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHCCCHHEEECCCCCCCCCHHHHHCCCCC YVNTTSPRVAAGLGTIAKVVGTGSNIYRGKLTFAEAQTRIEALYHPYHAALAALVEATRL HHCCCCCHHHHHHHHHHHHHCCCCCEEECEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFGYALLLDCHSMPAPLQGNPDLAAQIVLGDRHGLTCAPAVMETAEATLRGAGYRVSRNM HHCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHCCCEEEECCC PYAGGFTTSHYGRPAAGTHTLQIEVSRRLYMDEITRERFPAFDDLRDKLAGLILALGSLP CCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC AALLQPHPSC HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA