Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is 83593873
Identifier: 83593873
GI number: 83593873
Start: 2952221
End: 2952718
Strand: Direct
Name: 83593873
Synonym: Rru_A2538
Alternate gene names: NA
Gene position: 2952221-2952718 (Clockwise)
Preceding gene: 83593872
Following gene: 83593874
Centisome position: 67.82
GC content: 65.06
Gene sequence:
>498_bases ATGACGCCAGAAGAATTCAGGGCGTTTCTTGATATCTACGGGTCGGATCTGACGAAATGGCCCGCCGGCCGCCGCTTGGC CGCCGAACGGCTGTTGAAAACCTCCGACAGCACCATTGATATCTTCGCCGAAGCCTGCGCCTTCGAGGAACTGTTGCGCC AGCCGGCGCCACCGCTGGCCAATGCCCGGCGCGCCGCTCTGGTCGATTCGATCATGGATCGCCTGGATCCGCCGACGGAG CCCGCCAGCAAGCCGCCGCCCCTGCCCCGGCTTGTCGTCTCCGCCCCCTCGGCCACCGCGCCAAGGAAGCCCGCGCCGGT TTTGCGCGAGTCTTGGGCCTTTGGCTTGGATCGGCTTTTCTTGCCGATGCCGGGACTGATGGCGGGCTGCGCCATGGCCG GTTTGCTGATCGGCGTCGGCCTTGGACAGATGGCGGCCGGAGGGACGCTGTCTTTCATGCCGGCGATTTATGGCGGTATC GACCTTTGGTTGCGCTAA
Upstream 100 bases:
>100_bases GTGACATCTAACCGTTCCCCGGCTCCTCGCCTCAGAATCGACGGCGATTTCGGGAAACGAAGGCTTGAAGACCACCGAAG CCCCCTGGGAGGGACTTTAT
Downstream 100 bases:
>100_bases CTTGCGGATCAGCCATGGCTCTTCCATCATAAACGGCGTAAACCTTGTCCATCCTTCCCCTTTGGGTCGGCGTCCGCGCC GCCACGGATCGAGCCCCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTPEEFRAFLDIYGSDLTKWPAGRRLAAERLLKTSDSTIDIFAEACAFEELLRQPAPPLANARRAALVDSIMDRLDPPTE PASKPPPLPRLVVSAPSATAPRKPAPVLRESWAFGLDRLFLPMPGLMAGCAMAGLLIGVGLGQMAAGGTLSFMPAIYGGI DLWLR
Sequences:
>Translated_165_residues MTPEEFRAFLDIYGSDLTKWPAGRRLAAERLLKTSDSTIDIFAEACAFEELLRQPAPPLANARRAALVDSIMDRLDPPTE PASKPPPLPRLVVSAPSATAPRKPAPVLRESWAFGLDRLFLPMPGLMAGCAMAGLLIGVGLGQMAAGGTLSFMPAIYGGI DLWLR >Mature_164_residues TPEEFRAFLDIYGSDLTKWPAGRRLAAERLLKTSDSTIDIFAEACAFEELLRQPAPPLANARRAALVDSIMDRLDPPTEP ASKPPPLPRLVVSAPSATAPRKPAPVLRESWAFGLDRLFLPMPGLMAGCAMAGLLIGVGLGQMAAGGTLSFMPAIYGGID LWLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17715; Mature: 17584
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPEEFRAFLDIYGSDLTKWPAGRRLAAERLLKTSDSTIDIFAEACAFEELLRQPAPPLA CCHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCH NARRAALVDSIMDRLDPPTEPASKPPPLPRLVVSAPSATAPRKPAPVLRESWAFGLDRLF HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH LPMPGLMAGCAMAGLLIGVGLGQMAAGGTLSFMPAIYGGIDLWLR HCCCHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TPEEFRAFLDIYGSDLTKWPAGRRLAAERLLKTSDSTIDIFAEACAFEELLRQPAPPLA CHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCH NARRAALVDSIMDRLDPPTEPASKPPPLPRLVVSAPSATAPRKPAPVLRESWAFGLDRLF HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH LPMPGLMAGCAMAGLLIGVGLGQMAAGGTLSFMPAIYGGIDLWLR HCCCHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA