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The map label for this gene is mcp4 [H]

Identifier: 83593795

GI number: 83593795

Start: 2858694

End: 2860391

Strand: Direct

Name: mcp4 [H]

Synonym: Rru_A2460

Alternate gene names: 83593795

Gene position: 2858694-2860391 (Clockwise)

Preceding gene: 83593794

Following gene: 83593796

Centisome position: 65.67

GC content: 64.55

Gene sequence:

>1698_bases
ATGTTAAAAAATTTAACCATTGGCGCCCGCCTGACGCTTCTGGGTCTGGTCGCTTTCGCCACGCTGGCCGCGATCGCCTC
GATCGCCATCTACAGCACCTATCAGGCGCGTTTCGAGGACCGTCGCGAAACCCTTCATCTTCTGGCCCAGACCGCCGTGA
CGACGATCGCCGGCCTGAAAACCCGGGCCGACGCCGGCGAGATGACCACCGAGGAAGCCCAGAAACGGGCCCTGGTCGCC
CTGACCTCGATCACGTATGGCAAGGGCAATTATTTCATTGTCTTGCGCTCCGACGGCGTTTTGCTGATGCACCCCACCCG
CCAGAACCAAGTCGGCACCAATGTTCTTGAAGGCAGCGACGCCGTCGCCAAGGAGCTCTATGGCACGCTCATTCCCTTGG
CCATGCGCAACGGCGAAAAGGGTGATTTCCACACCTCGATGGGACGGCGTCCCGGGTCGACGGTCAATAACTCCCCGAAG
ATGTTCCACGCCCTCCAGGAACCAAGCTATGGCTGGATTCTGGCCAGCGGCCTGTTCGTCGACGACATCGAGGACCAGAT
CGCCTCCCAGGCGCGGCTGATCGGCCTGATGGCCCTGGTCGCCGCCCTCATCCTCGGCGGAGTCGGCCTGATCATCGCCC
GCGGGATCACCAAGCCTCTGAAGACCGTCGTCGAGGGACTCGACGGTCTGGCCGATCGCGATTATCGCCGGTCGCTTGAC
ATCCCGGCGTCGCGCTCCGAGGTCGGGCGCATCGCCTCGGCCTTCGAGCGCCTGCGCGGCCTGTTGCTTGAGGCCGCCGA
AGAGCGCCGCCAAAACGCCGAACGCACCGAACAGGCGGCGCTGGCCCGCAAAGAGGAAATGCTGGCCCTGGCCAGTCGTT
TCGAAAACCAGATCGGCGACCTCGTGAACGGTCTGGGATCGGCCTCGGAGGCCTTGCGGGTGTCTGCCAGCACGATGTCG
AGCGGCGCCGAGGAAACCCTGAGCCAGGCGAGCACGGTCACCGCCGCCGCCTCGGAATCCTCGGAAAACACTCAGACCGT
CGCCGCCGCGACCGAGGAACTGGCCAGTTCAATCCAGGAAATCAGCCGTCAGGCTTCCCACTCCAACGCCATGGCGCGCA
CCGCCGTCGAGCGCGTCGACGAAACCAACAAAACCGTCGCCGCGCTGAATTCCGCCGCCCTGCGGGTTGGCGACGTGGTC
GCCCTGATCACCGACATCGCCAGCCAGACCAATCTTCTGGCGCTCAACGCCACGATCGAGGCGGCGCGCGCCGGCGAAGC
GGGCAAGGGCTTCGCCGTGGTTGCCGGAGAGGTGAAATCCCTGGCCCAGCAGACGGCCAAGGCGACCGAGGATATTTCCC
GCCAGATCGAGGACATCCAGAGCGTCACCACCAGCACCGTCCAGGCGATTTCGGCGATCGGCGAATCGATCAACGGCCTC
AGCGAGGTGGCCGGCATGATCGCCGCCGCCGTCGAGGAGCAAAATGCCGCGACCAAGGAGATTTCGATGAATATTCAACG
CGCCGAAGGGGCCTCGCGCGAGGTCAGCGGCGCGATCTCCCTGGTGAGCGAGGCCGCGCGCAGCGGGGGCGAAACCGCCG
CCGACGTTCTGGGGGCGGCCGAGGATCTGTTCCACCGGAACAAGGAATTGAACACCGCCGTTTCGGACTTCGTCTCCTAT
ATCCGCAGCGCGAATTAA

Upstream 100 bases:

>100_bases
TGAGGAAGACTAACCCATAATTTTCGTGTTTACGTCGCATCGCCATGAGGACTATAGGTTTCCCGTCCCCCTTTATCCCC
CGATACAGGACGTTCTTATC

Downstream 100 bases:

>100_bases
CCCGGCTAACACCCTTTATTTGTGCATGGAAATCCAACCTCAGGGTGACCGTCCCCCCGGGCGGTCACCCCCGGATCCGC
ACCCGAAAAAGAGAAGGTGA

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MLKNLTIGARLTLLGLVAFATLAAIASIAIYSTYQARFEDRRETLHLLAQTAVTTIAGLKTRADAGEMTTEEAQKRALVA
LTSITYGKGNYFIVLRSDGVLLMHPTRQNQVGTNVLEGSDAVAKELYGTLIPLAMRNGEKGDFHTSMGRRPGSTVNNSPK
MFHALQEPSYGWILASGLFVDDIEDQIASQARLIGLMALVAALILGGVGLIIARGITKPLKTVVEGLDGLADRDYRRSLD
IPASRSEVGRIASAFERLRGLLLEAAEERRQNAERTEQAALARKEEMLALASRFENQIGDLVNGLGSASEALRVSASTMS
SGAEETLSQASTVTAAASESSENTQTVAAATEELASSIQEISRQASHSNAMARTAVERVDETNKTVAALNSAALRVGDVV
ALITDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKSLAQQTAKATEDISRQIEDIQSVTTSTVQAISAIGESINGL
SEVAGMIAAAVEEQNAATKEISMNIQRAEGASREVSGAISLVSEAARSGGETAADVLGAAEDLFHRNKELNTAVSDFVSY
IRSAN

Sequences:

>Translated_565_residues
MLKNLTIGARLTLLGLVAFATLAAIASIAIYSTYQARFEDRRETLHLLAQTAVTTIAGLKTRADAGEMTTEEAQKRALVA
LTSITYGKGNYFIVLRSDGVLLMHPTRQNQVGTNVLEGSDAVAKELYGTLIPLAMRNGEKGDFHTSMGRRPGSTVNNSPK
MFHALQEPSYGWILASGLFVDDIEDQIASQARLIGLMALVAALILGGVGLIIARGITKPLKTVVEGLDGLADRDYRRSLD
IPASRSEVGRIASAFERLRGLLLEAAEERRQNAERTEQAALARKEEMLALASRFENQIGDLVNGLGSASEALRVSASTMS
SGAEETLSQASTVTAAASESSENTQTVAAATEELASSIQEISRQASHSNAMARTAVERVDETNKTVAALNSAALRVGDVV
ALITDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKSLAQQTAKATEDISRQIEDIQSVTTSTVQAISAIGESINGL
SEVAGMIAAAVEEQNAATKEISMNIQRAEGASREVSGAISLVSEAARSGGETAADVLGAAEDLFHRNKELNTAVSDFVSY
IRSAN
>Mature_565_residues
MLKNLTIGARLTLLGLVAFATLAAIASIAIYSTYQARFEDRRETLHLLAQTAVTTIAGLKTRADAGEMTTEEAQKRALVA
LTSITYGKGNYFIVLRSDGVLLMHPTRQNQVGTNVLEGSDAVAKELYGTLIPLAMRNGEKGDFHTSMGRRPGSTVNNSPK
MFHALQEPSYGWILASGLFVDDIEDQIASQARLIGLMALVAALILGGVGLIIARGITKPLKTVVEGLDGLADRDYRRSLD
IPASRSEVGRIASAFERLRGLLLEAAEERRQNAERTEQAALARKEEMLALASRFENQIGDLVNGLGSASEALRVSASTMS
SGAEETLSQASTVTAAASESSENTQTVAAATEELASSIQEISRQASHSNAMARTAVERVDETNKTVAALNSAALRVGDVV
ALITDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKSLAQQTAKATEDISRQIEDIQSVTTSTVQAISAIGESINGL
SEVAGMIAAAVEEQNAATKEISMNIQRAEGASREVSGAISLVSEAARSGGETAADVLGAAEDLFHRNKELNTAVSDFVSY
IRSAN

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=325, Percent_Identity=27.3846153846154, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1787690, Length=275, Percent_Identity=32, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1788195, Length=232, Percent_Identity=31.8965517241379, Blast_Score=102, Evalue=1e-22,
Organism=Escherichia coli, GI1789453, Length=215, Percent_Identity=34.4186046511628, Blast_Score=99, Evalue=8e-22,
Organism=Escherichia coli, GI1788194, Length=252, Percent_Identity=30.5555555555556, Blast_Score=95, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 59522; Mature: 59522

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNLTIGARLTLLGLVAFATLAAIASIAIYSTYQARFEDRRETLHLLAQTAVTTIAGLK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRADAGEMTTEEAQKRALVALTSITYGKGNYFIVLRSDGVLLMHPTRQNQVGTNVLEGSD
CCCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEEEECCCEEEECCCCCCCCCCCHHCCCH
AVAKELYGTLIPLAMRNGEKGDFHTSMGRRPGSTVNNSPKMFHALQEPSYGWILASGLFV
HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCH
DDIEDQIASQARLIGLMALVAALILGGVGLIIARGITKPLKTVVEGLDGLADRDYRRSLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHCCC
IPASRSEVGRIASAFERLRGLLLEAAEERRQNAERTEQAALARKEEMLALASRFENQIGD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVNGLGSASEALRVSASTMSSGAEETLSQASTVTAAASESSENTQTVAAATEELASSIQE
HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ISRQASHSNAMARTAVERVDETNKTVAALNSAALRVGDVVALITDIASQTNLLALNATIE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHH
AARAGEAGKGFAVVAGEVKSLAQQTAKATEDISRQIEDIQSVTTSTVQAISAIGESINGL
HHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEVAGMIAAAVEEQNAATKEISMNIQRAEGASREVSGAISLVSEAARSGGETAADVLGAA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EDLFHRNKELNTAVSDFVSYIRSAN
HHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKNLTIGARLTLLGLVAFATLAAIASIAIYSTYQARFEDRRETLHLLAQTAVTTIAGLK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRADAGEMTTEEAQKRALVALTSITYGKGNYFIVLRSDGVLLMHPTRQNQVGTNVLEGSD
CCCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEEEECCCEEEECCCCCCCCCCCHHCCCH
AVAKELYGTLIPLAMRNGEKGDFHTSMGRRPGSTVNNSPKMFHALQEPSYGWILASGLFV
HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCH
DDIEDQIASQARLIGLMALVAALILGGVGLIIARGITKPLKTVVEGLDGLADRDYRRSLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHCCC
IPASRSEVGRIASAFERLRGLLLEAAEERRQNAERTEQAALARKEEMLALASRFENQIGD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVNGLGSASEALRVSASTMSSGAEETLSQASTVTAAASESSENTQTVAAATEELASSIQE
HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ISRQASHSNAMARTAVERVDETNKTVAALNSAALRVGDVVALITDIASQTNLLALNATIE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHH
AARAGEAGKGFAVVAGEVKSLAQQTAKATEDISRQIEDIQSVTTSTVQAISAIGESINGL
HHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEVAGMIAAAVEEQNAATKEISMNIQRAEGASREVSGAISLVSEAARSGGETAADVLGAA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EDLFHRNKELNTAVSDFVSYIRSAN
HHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]