Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is 83593789
Identifier: 83593789
GI number: 83593789
Start: 2852859
End: 2853830
Strand: Direct
Name: 83593789
Synonym: Rru_A2454
Alternate gene names: NA
Gene position: 2852859-2853830 (Clockwise)
Preceding gene: 83593788
Following gene: 83593790
Centisome position: 65.54
GC content: 73.25
Gene sequence:
>972_bases ATGACGGCCGACAGCGGCTCCAGGGCCATGGTGATAAGCCGGCGCGGCGACGGTGCGGGATATCCCGTGGCCGTCTTCCA GCCCCGCGACGCCCTGGCGGCCGGCTTCCAAAGCGTGCTTGCCGCCCATATGCCCGATGCCGCCCTGCAGGCCCGTTTGC GCGCTGGCGCCCGGGCCGTCGTCGACCGGCTGACCCCCCACCTGCCGCTGGTCGGCGGGGATCAGGGAGGCGGGGGCTAT CTGGTCGGCGGCTCCGTCGGCCGGCGTACCGCCGTCACCCTGACCGACAGGCCGCCGACCACCGATCTGTTCGTGCTGCT TGACGATCCCGCCTGCCGGGACCCGCGCTGCGCCGTCGACCGCCTGGGCGCCGCCCTCGCCGCCGCCGGTCTGCCCTGCC GCCCGCCAAGCGAGGGGCGAACCGCCCATGGCCTAGCGTGGGAGGATCTGCCCTTCGCCCTGCGCCCGGCCCTGCCGACG CGCGGCCGGCTGGCCCTGCCGGTGGCGGCCGAGAACGCCAGCCTGCGCTGGACGATCTGTGATCCTTTGGCCGAAACCGC CGCCATGCGGCTTCTGAACAGCCTTTATGGCGACCGGCCGCGCCAGATGATCACCCTGCTCAAGGTCTGGCGCCGCCATC ACCGGGTCGCCCTGTCGGGCTATGGCGTGGAGATCCTCGTCCAGGCGTTTTTCCGCGATGGCATGGCCCACCCTGGCGCC GATCTGGCCGAGGTCTTCGAAGCCTTCCTGGCCTGGGGCCGCAACGCCACCCCGGCCGCCCTCCCCTTGCCCGGCGGCCG ACGCAAGCTGGTGGTGGGCGAAGACTGGCACGGCGCGGCGGCGACGGCCTATTGGCAGGCGGTGGCGGCGCGCCATCGGG CGAGGACCGGCGATGTTCTGGGCAGCGCCGAAATCTGGCGCGGGCTGTTCGGCCCGGCCTTTCCCTTGCCAAGCCTGACC CTGGCCGCCTGA
Upstream 100 bases:
>100_bases GGTTCGCCCTGATCGCCTGAATGACGGCCGCTAAGGGATTCTTTACCCCCCGGCGATGAAATGCCTTTTTCACGGACCAT CCGGGGCGGAGTTTTTTCAG
Downstream 100 bases:
>100_bases CCCTAGCCGCCTGACCCACCGCCTTTTTCCCCGCCTTTTTCGCCCTCGACTTTCGATAGGGACGGCCGCCCGCGGCGGCC GGGACGCACGGCGTGCGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTADSGSRAMVISRRGDGAGYPVAVFQPRDALAAGFQSVLAAHMPDAALQARLRAGARAVVDRLTPHLPLVGGDQGGGGY LVGGSVGRRTAVTLTDRPPTTDLFVLLDDPACRDPRCAVDRLGAALAAAGLPCRPPSEGRTAHGLAWEDLPFALRPALPT RGRLALPVAAENASLRWTICDPLAETAAMRLLNSLYGDRPRQMITLLKVWRRHHRVALSGYGVEILVQAFFRDGMAHPGA DLAEVFEAFLAWGRNATPAALPLPGGRRKLVVGEDWHGAAATAYWQAVAARHRARTGDVLGSAEIWRGLFGPAFPLPSLT LAA
Sequences:
>Translated_323_residues MTADSGSRAMVISRRGDGAGYPVAVFQPRDALAAGFQSVLAAHMPDAALQARLRAGARAVVDRLTPHLPLVGGDQGGGGY LVGGSVGRRTAVTLTDRPPTTDLFVLLDDPACRDPRCAVDRLGAALAAAGLPCRPPSEGRTAHGLAWEDLPFALRPALPT RGRLALPVAAENASLRWTICDPLAETAAMRLLNSLYGDRPRQMITLLKVWRRHHRVALSGYGVEILVQAFFRDGMAHPGA DLAEVFEAFLAWGRNATPAALPLPGGRRKLVVGEDWHGAAATAYWQAVAARHRARTGDVLGSAEIWRGLFGPAFPLPSLT LAA >Mature_322_residues TADSGSRAMVISRRGDGAGYPVAVFQPRDALAAGFQSVLAAHMPDAALQARLRAGARAVVDRLTPHLPLVGGDQGGGGYL VGGSVGRRTAVTLTDRPPTTDLFVLLDDPACRDPRCAVDRLGAALAAAGLPCRPPSEGRTAHGLAWEDLPFALRPALPTR GRLALPVAAENASLRWTICDPLAETAAMRLLNSLYGDRPRQMITLLKVWRRHHRVALSGYGVEILVQAFFRDGMAHPGAD LAEVFEAFLAWGRNATPAALPLPGGRRKLVVGEDWHGAAATAYWQAVAARHRARTGDVLGSAEIWRGLFGPAFPLPSLTL AA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34258; Mature: 34127
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADSGSRAMVISRRGDGAGYPVAVFQPRDALAAGFQSVLAAHMPDAALQARLRAGARAV CCCCCCCEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VDRLTPHLPLVGGDQGGGGYLVGGSVGRRTAVTLTDRPPTTDLFVLLDDPACRDPRCAVD HHHCCCCCCEEECCCCCCCEEECCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHHH RLGAALAAAGLPCRPPSEGRTAHGLAWEDLPFALRPALPTRGRLALPVAAENASLRWTIC HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEC DPLAETAAMRLLNSLYGDRPRQMITLLKVWRRHHRVALSGYGVEILVQAFFRDGMAHPGA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHCCCCCCCC DLAEVFEAFLAWGRNATPAALPLPGGRRKLVVGEDWHGAAATAYWQAVAARHRARTGDVL HHHHHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCC GSAEIWRGLFGPAFPLPSLTLAA CHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TADSGSRAMVISRRGDGAGYPVAVFQPRDALAAGFQSVLAAHMPDAALQARLRAGARAV CCCCCCEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VDRLTPHLPLVGGDQGGGGYLVGGSVGRRTAVTLTDRPPTTDLFVLLDDPACRDPRCAVD HHHCCCCCCEEECCCCCCCEEECCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHHH RLGAALAAAGLPCRPPSEGRTAHGLAWEDLPFALRPALPTRGRLALPVAAENASLRWTIC HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEC DPLAETAAMRLLNSLYGDRPRQMITLLKVWRRHHRVALSGYGVEILVQAFFRDGMAHPGA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHCCCCCCCC DLAEVFEAFLAWGRNATPAALPLPGGRRKLVVGEDWHGAAATAYWQAVAARHRARTGDVL HHHHHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCC GSAEIWRGLFGPAFPLPSLTLAA CHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA