Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is 83593757
Identifier: 83593757
GI number: 83593757
Start: 2821552
End: 2822670
Strand: Direct
Name: 83593757
Synonym: Rru_A2422
Alternate gene names: NA
Gene position: 2821552-2822670 (Clockwise)
Preceding gene: 83593751
Following gene: 83593760
Centisome position: 64.82
GC content: 72.3
Gene sequence:
>1119_bases ATGAGCCTTCTTGACCAGACCTTGGCCCGGAGCGTGGGCCGGACCCTGGCACGCGCCACCCTGCCGCTGGTCGGCTGCCT CGCGCAAGCCGCGACCGCTAGCGCCCAGGGCCTGCCCCAGAACGATGTGGACGGCGCCATCGGCACCTGCATCGGCCGCG AGGGCGCCAATGGCGATGAGGTCGGCGAATTGGTCCTCGATCTCAAAACCGGCAAAACCGTTTTCCGCTGTAACAGCGAT TCGGCCACCACCACCCGCAGCCTGGACCCCGCCCCGCCGCCGGGCAGCGATCCCGGACCTTTGCGCGTTCCAGCCGAGGC GGTCGGCCGGATCATCGCCCCGCCCCCCGCCCCGCCGCAAGCCGCGCCCCCGGCCAACCGCCGCGCCGCCCCCGTACCCG CGCCGCCGCCCGCCGTCGCCGTGGCTCCGGCCCCCGATGTCGGGGCGATGCCCGCCTATACCCAGCCGCCCGATGAACCG CCCCCGGAAACCCCGAGCGACTGCGTCGGCGCCCATCCCTACTACATGACCTATCCGCCTTGCGTGATCGCCCGCAAGAT GGGCTTGCTCACCCCCGGCCCGGGCGGAGGGCCATCGGAAATCATGGTGCGTCAGGTGGCGCCGGTGGGCACGACGATGG CGCCGCCGGGGAGCGAAATCCCCGCCGAGGCCGGGGCCGCCACTGTCCAGGATAAGGCCAGCGCCGAGGCCGCGGTGGCC CGCACCATCGGCCCCTTGCCCGAAGGCGCCGATCAGGCGGCAGCGACGGCGGCCAACGCCACGCGCAACCGCCTTGCCGA GGAAGAGGCCAACCGCCAGGCCGAAGAGGCGGCGCGCAAGCCCTTCGATTGGGGCGCCCTGTTCTTCTGGATCGCCGTCG CGTTTGGCGGCCTGCTGGCGATCGGTGGCGGCGGACTGGCCGTCCTCATGGTGCGTAACCGCCTGCGCCTGACCCGCGCC GCCCGCCCCGACGATCCCTATGCCGGCTATTTCGAGGAGGCCGAGACGACGGAAGCCCCCAAGGCAAAAGGCAAAGCCTC TTCCAAGCCCGCCGCCGAGACCTCGCTTGACGCCTTCGAAGAACACCCCGACGGCGACCCGTTGCCGGCCGGGCAGTAG
Upstream 100 bases:
>100_bases ACCGGTCGAGGCAAACCTTTTCAAGATCGCCGGCCGGCCGTATCCTTCCAAGATCGTCGGAGATCCCCTTGCCCGACGCC GCTGAAGGACCGCCGCCCCG
Downstream 100 bases:
>100_bases CACCGCCAGCCTGGAATATCGTCCTAGAACGCTATTCCAGGCCTCTCCTCCCCCCTATCCGCGACCGCCTTTCCATTCCA GCAGACGACGGGCGGCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MSLLDQTLARSVGRTLARATLPLVGCLAQAATASAQGLPQNDVDGAIGTCIGREGANGDEVGELVLDLKTGKTVFRCNSD SATTTRSLDPAPPPGSDPGPLRVPAEAVGRIIAPPPAPPQAAPPANRRAAPVPAPPPAVAVAPAPDVGAMPAYTQPPDEP PPETPSDCVGAHPYYMTYPPCVIARKMGLLTPGPGGGPSEIMVRQVAPVGTTMAPPGSEIPAEAGAATVQDKASAEAAVA RTIGPLPEGADQAAATAANATRNRLAEEEANRQAEEAARKPFDWGALFFWIAVAFGGLLAIGGGGLAVLMVRNRLRLTRA ARPDDPYAGYFEEAETTEAPKAKGKASSKPAAETSLDAFEEHPDGDPLPAGQ
Sequences:
>Translated_372_residues MSLLDQTLARSVGRTLARATLPLVGCLAQAATASAQGLPQNDVDGAIGTCIGREGANGDEVGELVLDLKTGKTVFRCNSD SATTTRSLDPAPPPGSDPGPLRVPAEAVGRIIAPPPAPPQAAPPANRRAAPVPAPPPAVAVAPAPDVGAMPAYTQPPDEP PPETPSDCVGAHPYYMTYPPCVIARKMGLLTPGPGGGPSEIMVRQVAPVGTTMAPPGSEIPAEAGAATVQDKASAEAAVA RTIGPLPEGADQAAATAANATRNRLAEEEANRQAEEAARKPFDWGALFFWIAVAFGGLLAIGGGGLAVLMVRNRLRLTRA ARPDDPYAGYFEEAETTEAPKAKGKASSKPAAETSLDAFEEHPDGDPLPAGQ >Mature_371_residues SLLDQTLARSVGRTLARATLPLVGCLAQAATASAQGLPQNDVDGAIGTCIGREGANGDEVGELVLDLKTGKTVFRCNSDS ATTTRSLDPAPPPGSDPGPLRVPAEAVGRIIAPPPAPPQAAPPANRRAAPVPAPPPAVAVAPAPDVGAMPAYTQPPDEPP PETPSDCVGAHPYYMTYPPCVIARKMGLLTPGPGGGPSEIMVRQVAPVGTTMAPPGSEIPAEAGAATVQDKASAEAAVAR TIGPLPEGADQAAATAANATRNRLAEEEANRQAEEAARKPFDWGALFFWIAVAFGGLLAIGGGGLAVLMVRNRLRLTRAA RPDDPYAGYFEEAETTEAPKAKGKASSKPAAETSLDAFEEHPDGDPLPAGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37891; Mature: 37760
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLDQTLARSVGRTLARATLPLVGCLAQAATASAQGLPQNDVDGAIGTCIGREGANGDE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHH VGELVLDLKTGKTVFRCNSDSATTTRSLDPAPPPGSDPGPLRVPAEAVGRIIAPPPAPPQ HHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEECCCCCCCC AAPPANRRAAPVPAPPPAVAVAPAPDVGAMPAYTQPPDEPPPETPSDCVGAHPYYMTYPP CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCH CVIARKMGLLTPGPGGGPSEIMVRQVAPVGTTMAPPGSEIPAEAGAATVQDKASAEAAVA HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RTIGPLPEGADQAAATAANATRNRLAEEEANRQAEEAARKPFDWGALFFWIAVAFGGLLA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEE IGGGGLAVLMVRNRLRLTRAARPDDPYAGYFEEAETTEAPKAKGKASSKPAAETSLDAFE ECCCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH EHPDGDPLPAGQ HCCCCCCCCCCC >Mature Secondary Structure SLLDQTLARSVGRTLARATLPLVGCLAQAATASAQGLPQNDVDGAIGTCIGREGANGDE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHH VGELVLDLKTGKTVFRCNSDSATTTRSLDPAPPPGSDPGPLRVPAEAVGRIIAPPPAPPQ HHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEECCCCCCCC AAPPANRRAAPVPAPPPAVAVAPAPDVGAMPAYTQPPDEPPPETPSDCVGAHPYYMTYPP CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCH CVIARKMGLLTPGPGGGPSEIMVRQVAPVGTTMAPPGSEIPAEAGAATVQDKASAEAAVA HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RTIGPLPEGADQAAATAANATRNRLAEEEANRQAEEAARKPFDWGALFFWIAVAFGGLLA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEE IGGGGLAVLMVRNRLRLTRAARPDDPYAGYFEEAETTEAPKAKGKASSKPAAETSLDAFE ECCCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH EHPDGDPLPAGQ HCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA