Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
---|---|
Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is ykoW [H]
Identifier: 83593741
GI number: 83593741
Start: 2802329
End: 2806234
Strand: Direct
Name: ykoW [H]
Synonym: Rru_A2406
Alternate gene names: 83593741
Gene position: 2802329-2806234 (Clockwise)
Preceding gene: 83593740
Following gene: 83593742
Centisome position: 64.38
GC content: 63.44
Gene sequence:
>3906_bases ATGATCCCTTCGACGACAGATGACGCGAGGCCGGACCTCCCCTCGGATCAGGCGGAGCGCCATCCCGAGGGAGGGGCCGA TTTCGAGGCGATTTTCAGGGCGCTTCCGGGCCCCCATCTGATTCTGGACGCGGACTTGAAGATCGCCGCCGTCAATGACG CCTACCTTCAGGCGACGCTGACCCGTCGCGGCGAGATCCTTGGCCGGGGCATATTCGAGGTCTTTCCCGACAACCCCAAT GATCCGGTCAGCGAGGGCGTGCGCAATCTGCGGGCCTCGCTCCTGCGCGTCCTGTCAAGCCGGACCCAGGATGTGATGTC CATTCAGAAGTATGACGTGCGCAAGCCGGGCGGCGGGGCGGGCGACTTCGAGCTGCGCTATTGGAGTCCGATCAATACCC CCGTGCTTGGCGCCGATGGCGCGGTCGTCTACATCGTTCACTATGCCCAGGATCTAACCGAATACTATGCTTCCTCCGGG CAACAGGATTTCGCCGAGGGCGGGAAGGACGACATCGTCCGGCAGATGGAAGCGGAAATCTTTCAGCGCTCCAAAGAAGT CGCCAAATCAAACCTGAAATTGAAGGAAGCCAATTCAGAACTGGCGATCCTTTACGAAAAAACCCGCGAACTCGATGATA TCAAAACCCAGTTCTTCGCCAACGTCAGCCACGAGCTGCGCACCCCGCTGACCTTGATCCTCGGGCCGGTCACCAGCCGT CAGGAGGACCCGACGCTCGCCCCGGCCGAAAAGCGGGTGCTTGATATGGTGGCGCGCAATGCCCGACTGCTGCTCCGCCA CGTCAACGACCTGCTTGATATCGCTAAACTCGAAGCCGGGCAGATGCGGATGCAATATGTCCGCACCGATGTGACCCGGC TCTGCCGCTTCGCCCTGTCGCACTTCGACTCGTTGGCCGAGGAACGGGCCATCGCCTTCACCCTGGAGGCGCCCGCCGTC CTTTGGGCCGAGATCGATCCGGAAAAGTTCCGGCGGGTCCTGCTCAACCTTCTGTCCAACGCCTTCAAATTCACCCCCAA CCAGGGGGAGATCACCGTGTCGCTGATCGATCGCGGCGATGATGTGATCTTGCGGGTGAGCGACAACGGGCCGGGGATTC CCGAAAGCATGTGGACCGCCGTGTTCGAGCGCTTCCGCCAAGTCGATGGCGGCAGCGACCGCCGCCATGGCGGAACCGGG CTTGGTCTGGCCATCGTCAGGGAATTCGTCGATCTCCACGGCGGCGAGGTGAGCATCGGGCAGGCCTCGGAAGGCGGGGC GGCGTTCACCGTCGTCCTGCCCAAAAAGGCCCCGCCCGACGTCGCGGTCTATCCCGAAATCGGCGACACCCTGGCCGAAG GCCCGGGGTTCTATCGTGACATCGATAAGGGGCTTGAGGGCGAGGACCGCCTGACGGACCTCGCCCCGTCTGCCGCCGCC AGCGGGCCCGCCAGCGGGCCCGCTGGCGGCGTCGGCATCAACGCCCCGCTCGTTCTTGTCGTGGAGGACAACCCCGACAT GAACGCCTTTGTCAGCGAGATCGTCGCTGGACACTATCGGGTGATCTCGGCCTTCGACGGCCAGGAGGGGCTGGAGAAGG CCCACGAAACCCTGCCCGATCTGATCATCAGCGATGTCATGATGCCAAGGATGAGCGGCGAGACCATGGCCGACACCCTG CGTCAGGATGGTCTGACCAGCGATATTCCGATCATCATGCTCACCGCCAAAGCCGATGAGGCCATGCGCGCGCGCATGCT GCGCGGCGTGGTGCAGGACTATCTGTTCAAACCGTTTTCCCGCCTGGAACTGCTGGCCCGCGCCGATGGGCTGATCGCCG ACCACCGCCGCAAGCAGATGGTATTGCGCGAGAGCGAAGCCCGCTTCCGCGCCACCTTCGAACAAGCCGCCGTCGGCATC GCCCATCTCGATCCCGATGGCCATTGGCTGCGGGTGAACCACAAGCTCTGCGATATCGTCGGCTATCCCCCCGACGAGTT GCTCACGCTCAGCTTCCAAGACATCACCCATCCCGATGACCTGCGGGCCGATCTTCGCCAGATGGAGGCCCTGCTCGCCG GCCAGATCGACACCTATACCATCGAAAAGCGCTACATCCGCAAAACGGGGGAAAGCCTGTGGATCAACCTGACCGTCTCC CTGGTGCGCGACATCCATAACGCCCCGGCCTATTTCATCTCGGTGGTCGAAAACATCCAAAGCCGCAAGGAGGCCGAACT TCAGTTGCTGCTGGCCTCGGCGGTGTTTTCCAACAGCATGGAGGGGATCTTCGTCACCGACCTCAAAGGTTCGATCCTGG CGGTCAATCCGGCCTTCAGCCAGATCACCCTCTATGAAGCCGCCGAGGTTCTGGGGCGCAACGCCCGCATCTTGCAATCG GGTCGCCAAAACCGCGAGTTCTATGTCGCCTTGTGGCAAGACGTCCTGACCATCGGATCCTGGCGCGGGGAAATCTGGAA CCGCCGCCGCGATGGCGAGGTTTTCCCCGAATGGCTCAGCATCAGCTCGGTGCGCAACCATCAGGGCGAAGTCACCAATT ACATCGGCATTTTCTCCGATCTGTCGCGGATCAAGCATTCCGAAGCCAAATTCCACCACCTCGCCCACCACGATCCGCTA ACCGGCCTGCCTAACCGCCTGCTGTTGCGCAGCCGCCTCGATCACGCGATCGAACGGGCGCGGCGCACCGGCGGGCGGTG CGCCGTGTTGTTTCTCGACCTTGACCGCTTCAAGATGATCAACGACAGCCTGGGTCACCGGGCAGGTGATACCTTGCTGC GCACCCTGGGGGCGCGCCTGACCGCCTGCCTGGGCGATACCGGCACCCTCGCCCGCCTGGGCGGCGATGAATTCGTCGCG GTGATTGAAGACATCGATGGCATCCCGGCCGTCGGCACGATCGCCCTCACCATGCTCGAGCGCCTGCGCGAACCCTGCCG GTTGAGCGAAGGCCCCGAGGTTTGCATCGGCGGCAGCGTTGGCATCAGCCTATTCCCCGAAGACGGCGACAACCCCGATA CCTTGCTCCAACATGCCGATACCGCGCTGGGCCAGGTCAAAGGCGCCGGAGGGGGGGCTTATGGATTTTACACCCGGACC TTGACCGAACGGATCTCCGCCCGCCTTGGCCTGGAGGCCGGATTGCGCCACGCCTTGGAACAGGGGGATTTTCTCCTCCA CTACCAACCCTTGATCGCGCTGGGGACCGGCGAGGTCGAAGGGGTGGAGGCGCTGGTCCGCTGGGCGGGCGGCGACGGCC TGCTTATTCCCCCCGACCGCTTTATTCCCCTGGCCGAAGACACCGGGTTGATCGTTCCCTTGGGCGAATGGGTGCTCGGG GAAGCCTGCCGAACCATGCAGCGCTGGCGCAGCCAGGGCATGCCCCTGACGGTGCTGGCCGTCAATCTGTCACCCCGCCA GTTCCGCGACCACGCCATTCCCGCCCTGGTCCGCCGGGTCCTTGAACAAACCGGCTTGCCGGCCAGCGTCCTTGAGCTGG AAATCACCGAAAGCGCCATCATGGAACAAGGTGCCGCCGCCGAGGCCCAGATGACCGGGCTTAAGCACTTGGGCGTGCGG CTGGCGATCGATGATTTCGGCACCGGCTATTCGTCGCTGGCCAACCTCCGCCGCTTCCCCATCGATAAGATCAAGATCGA CCAAAGCTTCGTGCGCGATATCCCGCGCGATGCCGCCGCCGAAGAGATCACCGCGACGATCATCGCCATGGGGCGCACGC TCAAGCTCCATGTCCTGGCCGAAGGGGTGGAAACCACCGATCAGCTTGATTTCCTGTCGCGCAAGCAATGCGACAGCGCC CAGGGCTATCTGTTCAGCCGGCCGATCACCGCCGCCGCCCTGGAAAAGTGGCTCGCCCTACGCTGA
Upstream 100 bases:
>100_bases CGGTGCTAAGGAGAAAGCCGATGGATGAGACACCGCCGAGAAACGGCATGTGGTCCACCTCCGGCCGAAGCCAGGGATCT TTCATCTGGGACGGGCTTTC
Downstream 100 bases:
>100_bases GCCCGGATTGCCCGGCTTGCCCGGGGGCCACGAAGGGACTAAACGGAAAAGCGCGGGGAAAACAGCCCCGTCCCGCCCCC TCTCCCCCGGAGACACCAGC
Product: response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1301; Mature: 1301
Protein sequence:
>1301_residues MIPSTTDDARPDLPSDQAERHPEGGADFEAIFRALPGPHLILDADLKIAAVNDAYLQATLTRRGEILGRGIFEVFPDNPN DPVSEGVRNLRASLLRVLSSRTQDVMSIQKYDVRKPGGGAGDFELRYWSPINTPVLGADGAVVYIVHYAQDLTEYYASSG QQDFAEGGKDDIVRQMEAEIFQRSKEVAKSNLKLKEANSELAILYEKTRELDDIKTQFFANVSHELRTPLTLILGPVTSR QEDPTLAPAEKRVLDMVARNARLLLRHVNDLLDIAKLEAGQMRMQYVRTDVTRLCRFALSHFDSLAEERAIAFTLEAPAV LWAEIDPEKFRRVLLNLLSNAFKFTPNQGEITVSLIDRGDDVILRVSDNGPGIPESMWTAVFERFRQVDGGSDRRHGGTG LGLAIVREFVDLHGGEVSIGQASEGGAAFTVVLPKKAPPDVAVYPEIGDTLAEGPGFYRDIDKGLEGEDRLTDLAPSAAA SGPASGPAGGVGINAPLVLVVEDNPDMNAFVSEIVAGHYRVISAFDGQEGLEKAHETLPDLIISDVMMPRMSGETMADTL RQDGLTSDIPIIMLTAKADEAMRARMLRGVVQDYLFKPFSRLELLARADGLIADHRRKQMVLRESEARFRATFEQAAVGI AHLDPDGHWLRVNHKLCDIVGYPPDELLTLSFQDITHPDDLRADLRQMEALLAGQIDTYTIEKRYIRKTGESLWINLTVS LVRDIHNAPAYFISVVENIQSRKEAELQLLLASAVFSNSMEGIFVTDLKGSILAVNPAFSQITLYEAAEVLGRNARILQS GRQNREFYVALWQDVLTIGSWRGEIWNRRRDGEVFPEWLSISSVRNHQGEVTNYIGIFSDLSRIKHSEAKFHHLAHHDPL TGLPNRLLLRSRLDHAIERARRTGGRCAVLFLDLDRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGTLARLGGDEFVA VIEDIDGIPAVGTIALTMLERLREPCRLSEGPEVCIGGSVGISLFPEDGDNPDTLLQHADTALGQVKGAGGGAYGFYTRT LTERISARLGLEAGLRHALEQGDFLLHYQPLIALGTGEVEGVEALVRWAGGDGLLIPPDRFIPLAEDTGLIVPLGEWVLG EACRTMQRWRSQGMPLTVLAVNLSPRQFRDHAIPALVRRVLEQTGLPASVLELEITESAIMEQGAAAEAQMTGLKHLGVR LAIDDFGTGYSSLANLRRFPIDKIKIDQSFVRDIPRDAAAEEITATIIAMGRTLKLHVLAEGVETTDQLDFLSRKQCDSA QGYLFSRPITAAALEKWLALR
Sequences:
>Translated_1301_residues MIPSTTDDARPDLPSDQAERHPEGGADFEAIFRALPGPHLILDADLKIAAVNDAYLQATLTRRGEILGRGIFEVFPDNPN DPVSEGVRNLRASLLRVLSSRTQDVMSIQKYDVRKPGGGAGDFELRYWSPINTPVLGADGAVVYIVHYAQDLTEYYASSG QQDFAEGGKDDIVRQMEAEIFQRSKEVAKSNLKLKEANSELAILYEKTRELDDIKTQFFANVSHELRTPLTLILGPVTSR QEDPTLAPAEKRVLDMVARNARLLLRHVNDLLDIAKLEAGQMRMQYVRTDVTRLCRFALSHFDSLAEERAIAFTLEAPAV LWAEIDPEKFRRVLLNLLSNAFKFTPNQGEITVSLIDRGDDVILRVSDNGPGIPESMWTAVFERFRQVDGGSDRRHGGTG LGLAIVREFVDLHGGEVSIGQASEGGAAFTVVLPKKAPPDVAVYPEIGDTLAEGPGFYRDIDKGLEGEDRLTDLAPSAAA SGPASGPAGGVGINAPLVLVVEDNPDMNAFVSEIVAGHYRVISAFDGQEGLEKAHETLPDLIISDVMMPRMSGETMADTL RQDGLTSDIPIIMLTAKADEAMRARMLRGVVQDYLFKPFSRLELLARADGLIADHRRKQMVLRESEARFRATFEQAAVGI AHLDPDGHWLRVNHKLCDIVGYPPDELLTLSFQDITHPDDLRADLRQMEALLAGQIDTYTIEKRYIRKTGESLWINLTVS LVRDIHNAPAYFISVVENIQSRKEAELQLLLASAVFSNSMEGIFVTDLKGSILAVNPAFSQITLYEAAEVLGRNARILQS GRQNREFYVALWQDVLTIGSWRGEIWNRRRDGEVFPEWLSISSVRNHQGEVTNYIGIFSDLSRIKHSEAKFHHLAHHDPL TGLPNRLLLRSRLDHAIERARRTGGRCAVLFLDLDRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGTLARLGGDEFVA VIEDIDGIPAVGTIALTMLERLREPCRLSEGPEVCIGGSVGISLFPEDGDNPDTLLQHADTALGQVKGAGGGAYGFYTRT LTERISARLGLEAGLRHALEQGDFLLHYQPLIALGTGEVEGVEALVRWAGGDGLLIPPDRFIPLAEDTGLIVPLGEWVLG EACRTMQRWRSQGMPLTVLAVNLSPRQFRDHAIPALVRRVLEQTGLPASVLELEITESAIMEQGAAAEAQMTGLKHLGVR LAIDDFGTGYSSLANLRRFPIDKIKIDQSFVRDIPRDAAAEEITATIIAMGRTLKLHVLAEGVETTDQLDFLSRKQCDSA QGYLFSRPITAAALEKWLALR >Mature_1301_residues MIPSTTDDARPDLPSDQAERHPEGGADFEAIFRALPGPHLILDADLKIAAVNDAYLQATLTRRGEILGRGIFEVFPDNPN DPVSEGVRNLRASLLRVLSSRTQDVMSIQKYDVRKPGGGAGDFELRYWSPINTPVLGADGAVVYIVHYAQDLTEYYASSG QQDFAEGGKDDIVRQMEAEIFQRSKEVAKSNLKLKEANSELAILYEKTRELDDIKTQFFANVSHELRTPLTLILGPVTSR QEDPTLAPAEKRVLDMVARNARLLLRHVNDLLDIAKLEAGQMRMQYVRTDVTRLCRFALSHFDSLAEERAIAFTLEAPAV LWAEIDPEKFRRVLLNLLSNAFKFTPNQGEITVSLIDRGDDVILRVSDNGPGIPESMWTAVFERFRQVDGGSDRRHGGTG LGLAIVREFVDLHGGEVSIGQASEGGAAFTVVLPKKAPPDVAVYPEIGDTLAEGPGFYRDIDKGLEGEDRLTDLAPSAAA SGPASGPAGGVGINAPLVLVVEDNPDMNAFVSEIVAGHYRVISAFDGQEGLEKAHETLPDLIISDVMMPRMSGETMADTL RQDGLTSDIPIIMLTAKADEAMRARMLRGVVQDYLFKPFSRLELLARADGLIADHRRKQMVLRESEARFRATFEQAAVGI AHLDPDGHWLRVNHKLCDIVGYPPDELLTLSFQDITHPDDLRADLRQMEALLAGQIDTYTIEKRYIRKTGESLWINLTVS LVRDIHNAPAYFISVVENIQSRKEAELQLLLASAVFSNSMEGIFVTDLKGSILAVNPAFSQITLYEAAEVLGRNARILQS GRQNREFYVALWQDVLTIGSWRGEIWNRRRDGEVFPEWLSISSVRNHQGEVTNYIGIFSDLSRIKHSEAKFHHLAHHDPL TGLPNRLLLRSRLDHAIERARRTGGRCAVLFLDLDRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGTLARLGGDEFVA VIEDIDGIPAVGTIALTMLERLREPCRLSEGPEVCIGGSVGISLFPEDGDNPDTLLQHADTALGQVKGAGGGAYGFYTRT LTERISARLGLEAGLRHALEQGDFLLHYQPLIALGTGEVEGVEALVRWAGGDGLLIPPDRFIPLAEDTGLIVPLGEWVLG EACRTMQRWRSQGMPLTVLAVNLSPRQFRDHAIPALVRRVLEQTGLPASVLELEITESAIMEQGAAAEAQMTGLKHLGVR LAIDDFGTGYSSLANLRRFPIDKIKIDQSFVRDIPRDAAAEEITATIIAMGRTLKLHVLAEGVETTDQLDFLSRKQCDSA QGYLFSRPITAAALEKWLALR
Specific function: Probable signaling protein whose physiological role is not yet known [H]
COG id: COG5001
COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1787541, Length=563, Percent_Identity=36.234458259325, Blast_Score=338, Evalue=1e-93, Organism=Escherichia coli, GI87081921, Length=690, Percent_Identity=30.8695652173913, Blast_Score=288, Evalue=2e-78, Organism=Escherichia coli, GI226510982, Length=438, Percent_Identity=30.1369863013699, Blast_Score=178, Evalue=2e-45, Organism=Escherichia coli, GI87081743, Length=243, Percent_Identity=34.5679012345679, Blast_Score=149, Evalue=1e-36, Organism=Escherichia coli, GI1787055, Length=294, Percent_Identity=31.2925170068027, Blast_Score=148, Evalue=2e-36, Organism=Escherichia coli, GI1790496, Length=244, Percent_Identity=31.9672131147541, Blast_Score=144, Evalue=4e-35, Organism=Escherichia coli, GI87081845, Length=257, Percent_Identity=35.0194552529183, Blast_Score=140, Evalue=6e-34, Organism=Escherichia coli, GI1788502, Length=344, Percent_Identity=30.5232558139535, Blast_Score=138, Evalue=3e-33, Organism=Escherichia coli, GI1788713, Length=393, Percent_Identity=28.2442748091603, Blast_Score=136, Evalue=8e-33, Organism=Escherichia coli, GI1789149, Length=426, Percent_Identity=27.6995305164319, Blast_Score=136, Evalue=1e-32, Organism=Escherichia coli, GI87081980, Length=259, Percent_Identity=35.5212355212355, Blast_Score=133, Evalue=7e-32, Organism=Escherichia coli, GI1788849, Length=444, Percent_Identity=27.027027027027, Blast_Score=132, Evalue=2e-31, Organism=Escherichia coli, GI1788381, Length=344, Percent_Identity=30.5232558139535, Blast_Score=129, Evalue=9e-31, Organism=Escherichia coli, GI1786507, Length=242, Percent_Identity=33.0578512396694, Blast_Score=129, Evalue=2e-30, Organism=Escherichia coli, GI1786912, Length=250, Percent_Identity=32.8, Blast_Score=118, Evalue=3e-27, Organism=Escherichia coli, GI145693157, Length=249, Percent_Identity=31.7269076305221, Blast_Score=114, Evalue=5e-26, Organism=Escherichia coli, GI1786600, Length=230, Percent_Identity=31.304347826087, Blast_Score=113, Evalue=9e-26, Organism=Escherichia coli, GI87082096, Length=243, Percent_Identity=32.0987654320988, Blast_Score=112, Evalue=1e-25, Organism=Escherichia coli, GI48994928, Length=394, Percent_Identity=27.4111675126904, Blast_Score=111, Evalue=4e-25, Organism=Escherichia coli, GI1788393, Length=242, Percent_Identity=28.099173553719, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI87081816, Length=431, Percent_Identity=26.9141531322506, Blast_Score=100, Evalue=8e-22, Organism=Escherichia coli, GI1786783, Length=355, Percent_Identity=26.7605633802817, Blast_Score=91, Evalue=6e-19, Organism=Escherichia coli, GI1790436, Length=241, Percent_Identity=29.4605809128631, Blast_Score=87, Evalue=7e-18, Organism=Escherichia coli, GI1788956, Length=167, Percent_Identity=34.7305389221557, Blast_Score=85, Evalue=3e-17, Organism=Escherichia coli, GI1790861, Length=212, Percent_Identity=33.0188679245283, Blast_Score=85, Evalue=4e-17, Organism=Escherichia coli, GI1787894, Length=292, Percent_Identity=26.7123287671233, Blast_Score=83, Evalue=1e-16, Organism=Escherichia coli, GI1790346, Length=224, Percent_Identity=29.0178571428571, Blast_Score=82, Evalue=2e-16, Organism=Escherichia coli, GI87081977, Length=179, Percent_Identity=29.608938547486, Blast_Score=82, Evalue=2e-16, Organism=Escherichia coli, GI1787262, Length=164, Percent_Identity=33.5365853658537, Blast_Score=79, Evalue=2e-15, Organism=Escherichia coli, GI145693134, Length=182, Percent_Identity=31.8681318681319, Blast_Score=79, Evalue=2e-15, Organism=Escherichia coli, GI1786584, Length=176, Percent_Identity=28.9772727272727, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1789808, Length=228, Percent_Identity=31.140350877193, Blast_Score=73, Evalue=1e-13, Organism=Escherichia coli, GI1788279, Length=224, Percent_Identity=25.4464285714286, Blast_Score=73, Evalue=1e-13, Organism=Escherichia coli, GI1786599, Length=116, Percent_Identity=35.3448275862069, Blast_Score=73, Evalue=2e-13, Organism=Escherichia coli, GI1787816, Length=156, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1790551, Length=256, Percent_Identity=29.296875, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1788549, Length=220, Percent_Identity=26.3636363636364, Blast_Score=70, Evalue=6e-13, Organism=Escherichia coli, GI87082128, Length=258, Percent_Identity=26.7441860465116, Blast_Score=70, Evalue=6e-13, Organism=Escherichia coli, GI87081974, Length=132, Percent_Identity=32.5757575757576, Blast_Score=70, Evalue=8e-13, Organism=Escherichia coli, GI1788394, Length=149, Percent_Identity=33.5570469798658, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1786837, Length=127, Percent_Identity=33.0708661417323, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1787374, Length=240, Percent_Identity=25.4166666666667, Blast_Score=68, Evalue=3e-12, Organism=Escherichia coli, GI87081881, Length=201, Percent_Identity=28.8557213930348, Blast_Score=68, Evalue=4e-12, Organism=Escherichia coli, GI1787410, Length=152, Percent_Identity=27.6315789473684, Blast_Score=67, Evalue=7e-12, Organism=Escherichia coli, GI1789650, Length=430, Percent_Identity=20.9302325581395, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI87082012, Length=119, Percent_Identity=38.655462184874, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR001633 - InterPro: IPR005330 - InterPro: IPR000014 [H]
Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]
EC number: NA
Molecular weight: Translated: 143289; Mature: 143289
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN ; PS50883 EAL ; PS50887 GGDEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPSTTDDARPDLPSDQAERHPEGGADFEAIFRALPGPHLILDADLKIAAVNDAYLQATL CCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHCCCCCEEEECCEEEEEECHHHHHHHH TRRGEILGRGIFEVFPDNPNDPVSEGVRNLRASLLRVLSSRTQDVMSIQKYDVRKPGGGA HHHHHHHHCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GDFELRYWSPINTPVLGADGAVVYIVHYAQDLTEYYASSGQQDFAEGGKDDIVRQMEAEI CCCEEEEECCCCCCEECCCCCEEEEHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHH FQRSKEVAKSNLKLKEANSELAILYEKTRELDDIKTQFFANVSHELRTPLTLILGPVTSR HHHHHHHHHHCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC QEDPTLAPAEKRVLDMVARNARLLLRHVNDLLDIAKLEAGQMRMQYVRTDVTRLCRFALS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFDSLAEERAIAFTLEAPAVLWAEIDPEKFRRVLLNLLSNAFKFTPNQGEITVSLIDRGD HHHHHHHCCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCC DVILRVSDNGPGIPESMWTAVFERFRQVDGGSDRRHGGTGLGLAIVREFVDLHGGEVSIG EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEC QASEGGAAFTVVLPKKAPPDVAVYPEIGDTLAEGPGFYRDIDKGLEGEDRLTDLAPSAAA CCCCCCEEEEEEECCCCCCCEEECCCCCHHHHCCCCHHHHHHCCCCCCHHHHHCCCCCCC SGPASGPAGGVGINAPLVLVVEDNPDMNAFVSEIVAGHYRVISAFDGQEGLEKAHETLPD CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH LIISDVMMPRMSGETMADTLRQDGLTSDIPIIMLTAKADEAMRARMLRGVVQDYLFKPFS HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHH RLELLARADGLIADHRRKQMVLRESEARFRATFEQAAVGIAHLDPDGHWLRVNHKLCDIV HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEECCCEEEEC GYPPDELLTLSFQDITHPDDLRADLRQMEALLAGQIDTYTIEKRYIRKTGESLWINLTVS CCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCEEEEEEHHH LVRDIHNAPAYFISVVENIQSRKEAELQLLLASAVFSNSMEGIFVTDLKGSILAVNPAFS HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCHH QITLYEAAEVLGRNARILQSGRQNREFYVALWQDVLTIGSWRGEIWNRRRDGEVFPEWLS HHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHH ISSVRNHQGEVTNYIGIFSDLSRIKHSEAKFHHLAHHDPLTGLPNRLLLRSRLDHAIERA HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH RRTGGRCAVLFLDLDRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGTLARLGGDEFVA HHCCCCEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHH VIEDIDGIPAVGTIALTMLERLREPCRLSEGPEVCIGGSVGISLFPEDGDNPDTLLQHAD HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEECCCCCCCHHHHHHHHH TALGQVKGAGGGAYGFYTRTLTERISARLGLEAGLRHALEQGDFLLHYQPLIALGTGEVE HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEECCEEEECCCCHH GVEALVRWAGGDGLLIPPDRFIPLAEDTGLIVPLGEWVLGEACRTMQRWRSQGMPLTVLA HHHHHHHHCCCCCEEECCCCCEECCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCEEEEE VNLSPRQFRDHAIPALVRRVLEQTGLPASVLELEITESAIMEQGAAAEAQMTGLKHLGVR EECCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEHHHHHHHHCCCCHHHHHHHHHHCCEE LAIDDFGTGYSSLANLRRFPIDKIKIDQSFVRDIPRDAAAEEITATIIAMGRTLKLHVLA EEEECCCCCHHHHHHHHHCCCHHEECCHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEEE EGVETTDQLDFLSRKQCDSAQGYLFSRPITAAALEKWLALR CCCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCC >Mature Secondary Structure MIPSTTDDARPDLPSDQAERHPEGGADFEAIFRALPGPHLILDADLKIAAVNDAYLQATL CCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHCCCCCEEEECCEEEEEECHHHHHHHH TRRGEILGRGIFEVFPDNPNDPVSEGVRNLRASLLRVLSSRTQDVMSIQKYDVRKPGGGA HHHHHHHHCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GDFELRYWSPINTPVLGADGAVVYIVHYAQDLTEYYASSGQQDFAEGGKDDIVRQMEAEI CCCEEEEECCCCCCEECCCCCEEEEHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHH FQRSKEVAKSNLKLKEANSELAILYEKTRELDDIKTQFFANVSHELRTPLTLILGPVTSR HHHHHHHHHHCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC QEDPTLAPAEKRVLDMVARNARLLLRHVNDLLDIAKLEAGQMRMQYVRTDVTRLCRFALS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFDSLAEERAIAFTLEAPAVLWAEIDPEKFRRVLLNLLSNAFKFTPNQGEITVSLIDRGD HHHHHHHCCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCC DVILRVSDNGPGIPESMWTAVFERFRQVDGGSDRRHGGTGLGLAIVREFVDLHGGEVSIG EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEC QASEGGAAFTVVLPKKAPPDVAVYPEIGDTLAEGPGFYRDIDKGLEGEDRLTDLAPSAAA CCCCCCEEEEEEECCCCCCCEEECCCCCHHHHCCCCHHHHHHCCCCCCHHHHHCCCCCCC SGPASGPAGGVGINAPLVLVVEDNPDMNAFVSEIVAGHYRVISAFDGQEGLEKAHETLPD CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH LIISDVMMPRMSGETMADTLRQDGLTSDIPIIMLTAKADEAMRARMLRGVVQDYLFKPFS HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHH RLELLARADGLIADHRRKQMVLRESEARFRATFEQAAVGIAHLDPDGHWLRVNHKLCDIV HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEECCCEEEEC GYPPDELLTLSFQDITHPDDLRADLRQMEALLAGQIDTYTIEKRYIRKTGESLWINLTVS CCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCEEEEEEHHH LVRDIHNAPAYFISVVENIQSRKEAELQLLLASAVFSNSMEGIFVTDLKGSILAVNPAFS HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCHH QITLYEAAEVLGRNARILQSGRQNREFYVALWQDVLTIGSWRGEIWNRRRDGEVFPEWLS HHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHH ISSVRNHQGEVTNYIGIFSDLSRIKHSEAKFHHLAHHDPLTGLPNRLLLRSRLDHAIERA HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH RRTGGRCAVLFLDLDRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGTLARLGGDEFVA HHCCCCEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHH VIEDIDGIPAVGTIALTMLERLREPCRLSEGPEVCIGGSVGISLFPEDGDNPDTLLQHAD HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEECCCCCCCHHHHHHHHH TALGQVKGAGGGAYGFYTRTLTERISARLGLEAGLRHALEQGDFLLHYQPLIALGTGEVE HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEECCEEEECCCCHH GVEALVRWAGGDGLLIPPDRFIPLAEDTGLIVPLGEWVLGEACRTMQRWRSQGMPLTVLA HHHHHHHHCCCCCEEECCCCCEECCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCEEEEE VNLSPRQFRDHAIPALVRRVLEQTGLPASVLELEITESAIMEQGAAAEAQMTGLKHLGVR EECCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEHHHHHHHHCCCCHHHHHHHHHHCCEE LAIDDFGTGYSSLANLRRFPIDKIKIDQSFVRDIPRDAAAEEITATIIAMGRTLKLHVLA EEEECCCCCHHHHHHHHHCCCHHEECCHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEEE EGVETTDQLDFLSRKQCDSAQGYLFSRPITAAALEKWLALR CCCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 11728710 [H]