Click here to switch to the map view.

The map label for this gene is mcp4 [H]

Identifier: 83593701

GI number: 83593701

Start: 2757614

End: 2759296

Strand: Direct

Name: mcp4 [H]

Synonym: Rru_A2366

Alternate gene names: 83593701

Gene position: 2757614-2759296 (Clockwise)

Preceding gene: 83593700

Following gene: 83593702

Centisome position: 63.35

GC content: 66.31

Gene sequence:

>1683_bases
ATGCGATCGCTCTCGCTGCGAAGCCAAATCCTGCTTATTCCCTGCCTCGCCGCCGGGGCGATCGTTCTGGTCGCCCTGTT
CGCCGGCACTCTCATCCATGACCGGATCGAAGAGACCCACCGCGTTCAGATCAAAAGTGTCACGGAATCCACGGTCAAGG
TGATCGCCTCGCTGCATGCCCAGGTGGCGGCGGGCGCCCTGGCCGAGGATCAGGCCCAGCGTCTGGCCCGCGACGCCGTC
CGCGCCATCCGCTTCGCCGGCGACGAATACTTCTATATCTACGCCTATGACGGCAAGTTGCTGGCCCATGCCGTCCGCCC
CGACCTGGAAGGAACCTATACCCTCAAGGACACCCGCGACGCCAAAGGGGTGAAGATCGTCGAGGACCTGATCGAGATCG
CCAAACGCGGCGGCGGCTTCATGCCGTTCGTCTGGCCCAAGCCCGGCCAAACCGAACCGGTGGCCAAATTGGGCTATGCC
GAGAGCTTCGCCCCCTGGGGATGGATGGTCGGCACCGGCGTTTATATGGACGATGTCGAGACCGAGGTGGCGCGCACCCT
GTGGGAAATCGCCATCGGCGGCTTTTGCGCCCTGGTCTTCATCGCGATCATCGGCCTTGGCGTGACCCGCAGCATCGGCC
GGCGGGTTCGCGGGCAGGCCGAGCGCATGGGGGCGATGGCCGAGGGCGATCTGACCACGGCGGTCCCGGCCGATTCGGCC
AATGATGAACTGGCGGCGATGGCCAGAACCCTTGAGGTCTTCCGCCATCGCCTGATCGAAAACCGCGATATGGCCGAGGC
CCGCGAGGCCGAACAGCGGCGGCGCGCCGAGGAGGCCGAACGCATCGGCGCCCTGGCCCGCGCCTTTGACGCCGCCACCG
AAACCACCCTTCAGGTGGTCAGCGGCGCCGCCCTTGATCTTGAACGCGACGCAGGCGCCCTGTCGCTTTCGGCCGAAAAC
ATCGGCGAACGTTCGGTCACGGTGTCCTCGGCCGCCGAACAGGCCTCGGTCAATGTCCAGACCGTCGCCGCCTCCACCGA
GGAACTGACGGCCTCGATCAACGAGATCGCCCGTCAAGTGGCGACCTCGGCCCAGGTCGCCATGGATGCGGTGACGGAAA
CCAGGAAGACCAGCGCCCATATCCACGGCTTGGCCGATGCGGCGCAGCGCATCGGCGCGGTGGTCGAACTGATTACCGAT
ATCGCCAGCCAAACCAACTTGCTGGCGCTCAACGCCACCATCGAGGCCGCCCGGGCGGGCGATGCCGGCAAGGGCTTCGC
CGTGGTCGCCGGCGAGGTCAAATCCCTGGCCAACCAAACGGCGCGGGCGACCGGGGAGATCGGCGAGCAGATCGCGGCGA
TCCAGCAGGCGACGACGGTCGCCGTCGACGCCATCGAGGCGATTTCCACCGTCATCGCCACCATTGGCGATTCGACAACG
ACGATCGCCACCGCCGTCGAGCAACAGGGCATGGCGACGCGCGAGATCACCAGCAATGTGCATCAGGCGGCGGCCGGCAC
CGCCCTGGTCAGCCAAAGCATCGGCGCCATCGCCGAGACCATCGCCACCACCCGTCAGGCTTCGGCAAGCGTATTGAACG
CCGCCGGTCAGTTGCGCCAGGAATCCACCAGCCTGCATGAAAAGGTCATCGGCTTCCTGGCCGGCGTGCGCGGTCAAGCC
TAA

Upstream 100 bases:

>100_bases
AAGCAGGGCGTTGTTCAAGCGGGGGGCCTTATGGCTCCATACGCCGCTCCACCATCCGTTTCGACTCGCTCCCTCTCCGA
CTTCAAGAAAGCCCCGCCCC

Downstream 100 bases:

>100_bases
CGGAACGGGTGTTTTTGTCTAAATGCACCGGTTTTAGGCCCTTGGGCAGGACGACCGCCGCCGCGGACGTCCTCCCAGCC
GGTTTCTCTGGCATCACCCT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MRSLSLRSQILLIPCLAAGAIVLVALFAGTLIHDRIEETHRVQIKSVTESTVKVIASLHAQVAAGALAEDQAQRLARDAV
RAIRFAGDEYFYIYAYDGKLLAHAVRPDLEGTYTLKDTRDAKGVKIVEDLIEIAKRGGGFMPFVWPKPGQTEPVAKLGYA
ESFAPWGWMVGTGVYMDDVETEVARTLWEIAIGGFCALVFIAIIGLGVTRSIGRRVRGQAERMGAMAEGDLTTAVPADSA
NDELAAMARTLEVFRHRLIENRDMAEAREAEQRRRAEEAERIGALARAFDAATETTLQVVSGAALDLERDAGALSLSAEN
IGERSVTVSSAAEQASVNVQTVAASTEELTASINEIARQVATSAQVAMDAVTETRKTSAHIHGLADAAQRIGAVVELITD
IASQTNLLALNATIEAARAGDAGKGFAVVAGEVKSLANQTARATGEIGEQIAAIQQATTVAVDAIEAISTVIATIGDSTT
TIATAVEQQGMATREITSNVHQAAAGTALVSQSIGAIAETIATTRQASASVLNAAGQLRQESTSLHEKVIGFLAGVRGQA

Sequences:

>Translated_560_residues
MRSLSLRSQILLIPCLAAGAIVLVALFAGTLIHDRIEETHRVQIKSVTESTVKVIASLHAQVAAGALAEDQAQRLARDAV
RAIRFAGDEYFYIYAYDGKLLAHAVRPDLEGTYTLKDTRDAKGVKIVEDLIEIAKRGGGFMPFVWPKPGQTEPVAKLGYA
ESFAPWGWMVGTGVYMDDVETEVARTLWEIAIGGFCALVFIAIIGLGVTRSIGRRVRGQAERMGAMAEGDLTTAVPADSA
NDELAAMARTLEVFRHRLIENRDMAEAREAEQRRRAEEAERIGALARAFDAATETTLQVVSGAALDLERDAGALSLSAEN
IGERSVTVSSAAEQASVNVQTVAASTEELTASINEIARQVATSAQVAMDAVTETRKTSAHIHGLADAAQRIGAVVELITD
IASQTNLLALNATIEAARAGDAGKGFAVVAGEVKSLANQTARATGEIGEQIAAIQQATTVAVDAIEAISTVIATIGDSTT
TIATAVEQQGMATREITSNVHQAAAGTALVSQSIGAIAETIATTRQASASVLNAAGQLRQESTSLHEKVIGFLAGVRGQA
>Mature_560_residues
MRSLSLRSQILLIPCLAAGAIVLVALFAGTLIHDRIEETHRVQIKSVTESTVKVIASLHAQVAAGALAEDQAQRLARDAV
RAIRFAGDEYFYIYAYDGKLLAHAVRPDLEGTYTLKDTRDAKGVKIVEDLIEIAKRGGGFMPFVWPKPGQTEPVAKLGYA
ESFAPWGWMVGTGVYMDDVETEVARTLWEIAIGGFCALVFIAIIGLGVTRSIGRRVRGQAERMGAMAEGDLTTAVPADSA
NDELAAMARTLEVFRHRLIENRDMAEAREAEQRRRAEEAERIGALARAFDAATETTLQVVSGAALDLERDAGALSLSAEN
IGERSVTVSSAAEQASVNVQTVAASTEELTASINEIARQVATSAQVAMDAVTETRKTSAHIHGLADAAQRIGAVVELITD
IASQTNLLALNATIEAARAGDAGKGFAVVAGEVKSLANQTARATGEIGEQIAAIQQATTVAVDAIEAISTVIATIGDSTT
TIATAVEQQGMATREITSNVHQAAAGTALVSQSIGAIAETIATTRQASASVLNAAGQLRQESTSLHEKVIGFLAGVRGQA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=236, Percent_Identity=33.4745762711864, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1789453, Length=231, Percent_Identity=31.6017316017316, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1788195, Length=166, Percent_Identity=37.9518072289157, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI2367378, Length=251, Percent_Identity=30.2788844621514, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1787690, Length=373, Percent_Identity=28.686327077748, Blast_Score=89, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 58923; Mature: 58923

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLSLRSQILLIPCLAAGAIVLVALFAGTLIHDRIEETHRVQIKSVTESTVKVIASLHA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVAAGALAEDQAQRLARDAVRAIRFAGDEYFYIYAYDGKLLAHAVRPDLEGTYTLKDTRD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCCEEEECCCCC
AKGVKIVEDLIEIAKRGGGFMPFVWPKPGQTEPVAKLGYAESFAPWGWMVGTGVYMDDVE
CCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHCCHHCCCCCCHHHCCCCCHHHHH
TEVARTLWEIAIGGFCALVFIAIIGLGVTRSIGRRVRGQAERMGAMAEGDLTTAVPADSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCEECCCCCC
NDELAAMARTLEVFRHRLIENRDMAEAREAEQRRRAEEAERIGALARAFDAATETTLQVV
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGAALDLERDAGALSLSAENIGERSVTVSSAAEQASVNVQTVAASTEELTASINEIARQV
HCCHHEECCCCCCEEEEHHHCCCCCEEHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH
ATSAQVAMDAVTETRKTSAHIHGLADAAQRIGAVVELITDIASQTNLLALNATIEAARAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCC
DAGKGFAVVAGEVKSLANQTARATGEIGEQIAAIQQATTVAVDAIEAISTVIATIGDSTT
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TIATAVEQQGMATREITSNVHQAAAGTALVSQSIGAIAETIATTRQASASVLNAAGQLRQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESTSLHEKVIGFLAGVRGQA
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRSLSLRSQILLIPCLAAGAIVLVALFAGTLIHDRIEETHRVQIKSVTESTVKVIASLHA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVAAGALAEDQAQRLARDAVRAIRFAGDEYFYIYAYDGKLLAHAVRPDLEGTYTLKDTRD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCCEEEECCCCC
AKGVKIVEDLIEIAKRGGGFMPFVWPKPGQTEPVAKLGYAESFAPWGWMVGTGVYMDDVE
CCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHCCHHCCCCCCHHHCCCCCHHHHH
TEVARTLWEIAIGGFCALVFIAIIGLGVTRSIGRRVRGQAERMGAMAEGDLTTAVPADSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCEECCCCCC
NDELAAMARTLEVFRHRLIENRDMAEAREAEQRRRAEEAERIGALARAFDAATETTLQVV
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGAALDLERDAGALSLSAENIGERSVTVSSAAEQASVNVQTVAASTEELTASINEIARQV
HCCHHEECCCCCCEEEEHHHCCCCCEEHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH
ATSAQVAMDAVTETRKTSAHIHGLADAAQRIGAVVELITDIASQTNLLALNATIEAARAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCC
DAGKGFAVVAGEVKSLANQTARATGEIGEQIAAIQQATTVAVDAIEAISTVIATIGDSTT
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TIATAVEQQGMATREITSNVHQAAAGTALVSQSIGAIAETIATTRQASASVLNAAGQLRQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESTSLHEKVIGFLAGVRGQA
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]