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The map label for this gene is bdlA [H]

Identifier: 83593668

GI number: 83593668

Start: 2701814

End: 2703199

Strand: Direct

Name: bdlA [H]

Synonym: Rru_A2333

Alternate gene names: 83593668

Gene position: 2701814-2703199 (Clockwise)

Preceding gene: 83593667

Following gene: 83593670

Centisome position: 62.07

GC content: 62.99

Gene sequence:

>1386_bases
ATGACAAAGACTCCGGGCGGATCCAGCGGATCGACCGCGTCCCGTCGCCGAGAGCACCCGCCGTTAAACGGGGATCCTGT
CACGCGGACCCATTCCAGAATCGATCCCGTGAAGCGGCGACGTCGCGGACAACCGGGGAGGCGTTTTCCGCTCGCCGCCC
TCGTCGGACCGGCCCTGGTCATCGTCGCGGTTTTGCTGGGCGAGGGGCTGGTTTTCCTGCTGCCCTCGCTGAACGGTCCT
CCCCCCTTGCTTCTTCGTCTGATGGTCGCGCTGTCGGTGGCGACGGTGCTGTTCGTCGCCGCCTCTCGAAAGCGACGGCC
CGCCGCGCCAGCCTCCCCCGCCGCGCCAAGCGGCCCCGATCATCCGCCGGCGACGGTGGAGGCGCCGCCCGCCGCGTTCG
ACGCCCTGAACTATGGACGATGCCTTTCCGACACGATGGCGGGCTTCGCCGATTTTTCCGAGAGGATGAAAAAAGAAACC
ACCGCAATCATCCATGACACCGACCGGAACGCCGTTGACCTGATGACGCATTTACGCGAGGTCGAAAACGGCCTTGAAGC
GCTCCTTGAGTTCATCACCGCGACCGGGTCGAACGAGCGGGTTGTCCAGATCATCGATCGAACCGAGAGCCAGCTTGTGC
GGAGCCAGACGCTGATCGCCGATTTCTCCCGCGACCGCGAAGAGGACACGATCAAGGTCAAGGCCGGCATGGGCGACATC
GGACAGGTGGTGTCCGAACTCAGCAAGACCGTTCAAACCATCCGCGGCATCGCCCGCCAAACCCGCATGCTGGCCTTGAA
CGCCACCATCGAGGCGGTCCGCGCCGGCGAGGCCGGTCGCGGCTTCGCCATCGTCGCCGCCGAGGTCAAGGACCTGTCTC
TGCGATCGGATCAGGCGGCGATCGCCATCGGCGAGGGGATTTCCCGGCTGGAAACAGCGGTGCAAACCAGCCTCGACACC
ATCGTCGGCGAACGCATCGCCAAGGAGGAAAGCGGTTTCGCCGTCATGTCCGAAGCGGTCACGGAGCTGACCGAAAATCT
GCAGACCCTGATCAGCCAGCAACACGACACCCTGACCAAGGTGCGCTATGAAAACGAGCGATTGGCCACGCCGATCTTGC
AGATGATCGGCTCGATCCAGTTCCAGGACGTGGTGAAGCGGCGCATGGAGGCCCTGGTGACCTGTTTTGGCCATATCTCC
GACGCCATCGCCTCCTCGGCCACCGAGATATCCGATCCATCGATCTCCAGCCTTGACGAAATGAACAGGCGATCCCGGCG
CCAGATGGATGAAATGGTCAGCTTCGCCATCGATCAGCTGGAAAACAGCCACGACGAACACACCGCGAAATCGGCAAAAA
CCCCGTCGTTGATCGAGCTTTTCTGA

Upstream 100 bases:

>100_bases
GATGAGCGAAGGGATCGGCGGTGGCAGAGACCGTGAAAACCAACCGCGCAGGCGTTCATCGCCTCGCCAAAAGAAAGACC
CCGCGGGTATGGAGGAAGCG

Downstream 100 bases:

>100_bases
AGAACCGAGAGCGACCGGACAAGACAGTCCTGATGAGGGTGTCGATGCCCTCGGCGGCTTTTACCTGTCCGCCACAGCGG
CGCGGCCGTCGCTCGCGTAG

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MTKTPGGSSGSTASRRREHPPLNGDPVTRTHSRIDPVKRRRRGQPGRRFPLAALVGPALVIVAVLLGEGLVFLLPSLNGP
PPLLLRLMVALSVATVLFVAASRKRRPAAPASPAAPSGPDHPPATVEAPPAAFDALNYGRCLSDTMAGFADFSERMKKET
TAIIHDTDRNAVDLMTHLREVENGLEALLEFITATGSNERVVQIIDRTESQLVRSQTLIADFSRDREEDTIKVKAGMGDI
GQVVSELSKTVQTIRGIARQTRMLALNATIEAVRAGEAGRGFAIVAAEVKDLSLRSDQAAIAIGEGISRLETAVQTSLDT
IVGERIAKEESGFAVMSEAVTELTENLQTLISQQHDTLTKVRYENERLATPILQMIGSIQFQDVVKRRMEALVTCFGHIS
DAIASSATEISDPSISSLDEMNRRSRRQMDEMVSFAIDQLENSHDEHTAKSAKTPSLIELF

Sequences:

>Translated_461_residues
MTKTPGGSSGSTASRRREHPPLNGDPVTRTHSRIDPVKRRRRGQPGRRFPLAALVGPALVIVAVLLGEGLVFLLPSLNGP
PPLLLRLMVALSVATVLFVAASRKRRPAAPASPAAPSGPDHPPATVEAPPAAFDALNYGRCLSDTMAGFADFSERMKKET
TAIIHDTDRNAVDLMTHLREVENGLEALLEFITATGSNERVVQIIDRTESQLVRSQTLIADFSRDREEDTIKVKAGMGDI
GQVVSELSKTVQTIRGIARQTRMLALNATIEAVRAGEAGRGFAIVAAEVKDLSLRSDQAAIAIGEGISRLETAVQTSLDT
IVGERIAKEESGFAVMSEAVTELTENLQTLISQQHDTLTKVRYENERLATPILQMIGSIQFQDVVKRRMEALVTCFGHIS
DAIASSATEISDPSISSLDEMNRRSRRQMDEMVSFAIDQLENSHDEHTAKSAKTPSLIELF
>Mature_460_residues
TKTPGGSSGSTASRRREHPPLNGDPVTRTHSRIDPVKRRRRGQPGRRFPLAALVGPALVIVAVLLGEGLVFLLPSLNGPP
PLLLRLMVALSVATVLFVAASRKRRPAAPASPAAPSGPDHPPATVEAPPAAFDALNYGRCLSDTMAGFADFSERMKKETT
AIIHDTDRNAVDLMTHLREVENGLEALLEFITATGSNERVVQIIDRTESQLVRSQTLIADFSRDREEDTIKVKAGMGDIG
QVVSELSKTVQTIRGIARQTRMLALNATIEAVRAGEAGRGFAIVAAEVKDLSLRSDQAAIAIGEGISRLETAVQTSLDTI
VGERIAKEESGFAVMSEAVTELTENLQTLISQQHDTLTKVRYENERLATPILQMIGSIQFQDVVKRRMEALVTCFGHISD
AIASSATEISDPSISSLDEMNRRSRRQMDEMVSFAIDQLENSHDEHTAKSAKTPSLIELF

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=182, Percent_Identity=35.1648351648352, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI2367378, Length=64, Percent_Identity=54.6875, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1788194, Length=64, Percent_Identity=53.125, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787690, Length=71, Percent_Identity=53.5211267605634, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 50013; Mature: 49881

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTPGGSSGSTASRRREHPPLNGDPVTRTHSRIDPVKRRRRGQPGRRFPLAALVGPALV
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHCCHHHHHHCCCCCCCCCHHHHHHHHHH
IVAVLLGEGLVFLLPSLNGPPPLLLRLMVALSVATVLFVAASRKRRPAAPASPAAPSGPD
HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
HPPATVEAPPAAFDALNYGRCLSDTMAGFADFSERMKKETTAIIHDTDRNAVDLMTHLRE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHH
VENGLEALLEFITATGSNERVVQIIDRTESQLVRSQTLIADFSRDREEDTIKVKAGMGDI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
GQVVSELSKTVQTIRGIARQTRMLALNATIEAVRAGEAGRGFAIVAAEVKDLSLRSDQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCCCCCHH
IAIGEGISRLETAVQTSLDTIVGERIAKEESGFAVMSEAVTELTENLQTLISQQHDTLTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRYENERLATPILQMIGSIQFQDVVKRRMEALVTCFGHISDAIASSATEISDPSISSLDE
HHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
MNRRSRRQMDEMVSFAIDQLENSHDEHTAKSAKTPSLIELF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHCC
>Mature Secondary Structure 
TKTPGGSSGSTASRRREHPPLNGDPVTRTHSRIDPVKRRRRGQPGRRFPLAALVGPALV
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHCCHHHHHHCCCCCCCCCHHHHHHHHHH
IVAVLLGEGLVFLLPSLNGPPPLLLRLMVALSVATVLFVAASRKRRPAAPASPAAPSGPD
HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
HPPATVEAPPAAFDALNYGRCLSDTMAGFADFSERMKKETTAIIHDTDRNAVDLMTHLRE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHH
VENGLEALLEFITATGSNERVVQIIDRTESQLVRSQTLIADFSRDREEDTIKVKAGMGDI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
GQVVSELSKTVQTIRGIARQTRMLALNATIEAVRAGEAGRGFAIVAAEVKDLSLRSDQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCCCCCHH
IAIGEGISRLETAVQTSLDTIVGERIAKEESGFAVMSEAVTELTENLQTLISQQHDTLTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRYENERLATPILQMIGSIQFQDVVKRRMEALVTCFGHISDAIASSATEISDPSISSLDE
HHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
MNRRSRRQMDEMVSFAIDQLENSHDEHTAKSAKTPSLIELF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]