Click here to switch to the map view.

The map label for this gene is treZ [H]

Identifier: 83593630

GI number: 83593630

Start: 2655467

End: 2657485

Strand: Direct

Name: treZ [H]

Synonym: Rru_A2295

Alternate gene names: 83593630

Gene position: 2655467-2657485 (Clockwise)

Preceding gene: 83593629

Following gene: 83593631

Centisome position: 61.01

GC content: 66.57

Gene sequence:

>2019_bases
ATGGAGAGCCCCCTGACCCCGCCCGTGGCGCCGGCGCCACGCCCCCCCCTTTCCTCCCTCGTCGCGGCGCCCCCCGCCGA
AGATCCGCCAAGCGCGCGATCGGTCGCGGCCGCTCCTCCCCCCGCCCCGCCTGTCCGCCGCCTGCCCCAGGGCGCCGAGG
TTCAGCCGGGCGGCGGCGTGCATTTCCGGGTTTGGGCGCCCGGACGCCAGGCGGTGACGCTGTGCCTGGAAAACGGCGCG
GCGATCGCCATGACGGCCGAGGACGACGGCTCTTTCGCCGCTCTGGTCGCGGAGGCGGGCGCCGGCACCGCCTATCGCTA
CCGTCTGGAGGGAGTTGAGGCGCTTTGCCCCGATCCGCTGGCGCGCTTCCAGCCCGAGGGCCCCCATGGTCCGTCGCTGG
TGGTCGATCCCGCCGGCTTCGTCTGGAGCGATCAGGCCTGGGCCGGGGTCAGCCACCAGGGCATGGTGCTTTACGAGATG
CATATCGGCACCTTCACCCCGGAAGGAACCTGGGCGGCGGCGATGGCCCATCTGGAGCGCTTGCGCGATCTGGGCGTCAC
CTGCCTGGAAATCATGCCGATCGCCGAGTTTTCCGGCCGCTTCGGCTGGGGTTATGACGGCGTCAATCTATTCGCCCCGA
CCCGGCTTTATGGCCAGCCCGACGACATGCGCCGCTTCGTCGATCGCGCCCACGCCCTTGGTTTGGCCGTCATTCTCGAT
GTCGTCTATAACCACCTTGGCCCCGATGGCAATTACCTGGGCCATTTCACCAATGATTATTTCACCGACCGCTATAAGAA
CGATTGGGGCGTCGCCATCAACTTCGATGGCCCCGGCAGTGCGGGCGTGCGCGCCTTCTATCTGGCCAACGCCGGCTATT
GGATCGAGGAATTCCACCTGGACGGCTTGCGCCTTGACGCCACCCAGCAGATCTACGACCGCTCCGAGCCCTCGATCCTC
GCCGAAATCGCCCGCGAGGTTCGCGCCGCCGCCAAGGGCCGCAACACCTTCGTCGTCGCCGAGAACGAACCCCAGGAGGT
CCGCCTGATCGAGGACGAGACGGCGCAGGGCTACGGACTCGACGCCCTGTGGAACGACGATCTGCACCATGCCGCCATGG
TCGCCCTGACCGGTCGCCGCGAAGCCTATTACCTGGATTATCTTGGATCACCCCAGGAGCTTATTTCGGCGGCTAAATGG
GGGTTCCTTTATGCTGGCCAGTATTACAGCTGGCAACGCAATGGCCGGGGCACCACCAGCTTCGCCATTCCCGGGCGGGC
GATGGTCGCCTTTTTGCAAAATCACGATCAGGTCGCCAATTCGGCGCGCGGTCTACGGCTCGACAAACTCAGCGACGAGG
CCCAGTTCCGCGCCCTGACCGCCTATCTGCTGCTTATTCCGGCCACGCCGATGCTGTTTCAGGGCCAGGAGTTCCGTTCG
AGCGCGCCGTTTTACTATTTCGCCGACCATGGGCCCAAGCTGGCGGCGATGGTCAAAGACGGACGGGCTGATTTCCTGAC
CCAGTTTCCCAGCATCGATCAGGGCTGGCGGAGCGAGGATCTGCCCGACCCGGCGGCCGAGGCGACCTTCGAACGCTGCA
AGCTTGATCACCGGGAATGGCAAAGCCATGCCGAATGGGTCGCCCTGCACCGCGACCTGCTGACCCTGCGCCGCGAGACT
CCGGCCTTCGCCGCCCAGGATTGCCGGCGGATGGAGGGCGCGGTGCTCGGCCCCCAGACGTTCGTTTTGCGGTTTTTCGC
CGAAGAGCGCCTGAGCGATCGCCTGATGCTGGTCAACCTCGGCCCGCAGATCACCCTGACGCCGATGGCCGAACCGCTGC
TGGCGCCACCGATGGGCAAGGCCTGGACCACCCTGTGGGCGAGCAGCGATCAACGCTATGGCGGCGCCGGGCTGACGGCG
GTCGAGCGAACGCCGCTGTGGGAGATCCCCGCCCGCACGACCGTGGTTCTTGGTCCGGGCGAGAAAAAGCCCTTCATCGC
GCCCAGAACATCGGGCTGA

Upstream 100 bases:

>100_bases
CCCGGCCTTCACCCTTGGCGGGGGCGAGGGCATCGTCGTTTTGCTGGCCGACCGGGAAACGGCCCCCCCGTCCCCGGCGG
CGTAATGGGAGGAAAAAACA

Downstream 100 bases:

>100_bases
GCCTGGGCTTAACGGCGGCGGCAGCCAAGGCCTTGACGCTTTTCCTTGCGCCTGCCGGGCGGGCGGGTTAGGCAAAGGGC
TTGCCTGACCCCCCTAGAGG

Product: malto-oligosyltrehalose trehalohydrolase

Products: NA

Alternate protein names: MTHase; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase; Maltooligosyl trehalose trehalohydrolase [H]

Number of amino acids: Translated: 672; Mature: 672

Protein sequence:

>672_residues
MESPLTPPVAPAPRPPLSSLVAAPPAEDPPSARSVAAAPPPAPPVRRLPQGAEVQPGGGVHFRVWAPGRQAVTLCLENGA
AIAMTAEDDGSFAALVAEAGAGTAYRYRLEGVEALCPDPLARFQPEGPHGPSLVVDPAGFVWSDQAWAGVSHQGMVLYEM
HIGTFTPEGTWAAAMAHLERLRDLGVTCLEIMPIAEFSGRFGWGYDGVNLFAPTRLYGQPDDMRRFVDRAHALGLAVILD
VVYNHLGPDGNYLGHFTNDYFTDRYKNDWGVAINFDGPGSAGVRAFYLANAGYWIEEFHLDGLRLDATQQIYDRSEPSIL
AEIAREVRAAAKGRNTFVVAENEPQEVRLIEDETAQGYGLDALWNDDLHHAAMVALTGRREAYYLDYLGSPQELISAAKW
GFLYAGQYYSWQRNGRGTTSFAIPGRAMVAFLQNHDQVANSARGLRLDKLSDEAQFRALTAYLLLIPATPMLFQGQEFRS
SAPFYYFADHGPKLAAMVKDGRADFLTQFPSIDQGWRSEDLPDPAAEATFERCKLDHREWQSHAEWVALHRDLLTLRRET
PAFAAQDCRRMEGAVLGPQTFVLRFFAEERLSDRLMLVNLGPQITLTPMAEPLLAPPMGKAWTTLWASSDQRYGGAGLTA
VERTPLWEIPARTTVVLGPGEKKPFIAPRTSG

Sequences:

>Translated_672_residues
MESPLTPPVAPAPRPPLSSLVAAPPAEDPPSARSVAAAPPPAPPVRRLPQGAEVQPGGGVHFRVWAPGRQAVTLCLENGA
AIAMTAEDDGSFAALVAEAGAGTAYRYRLEGVEALCPDPLARFQPEGPHGPSLVVDPAGFVWSDQAWAGVSHQGMVLYEM
HIGTFTPEGTWAAAMAHLERLRDLGVTCLEIMPIAEFSGRFGWGYDGVNLFAPTRLYGQPDDMRRFVDRAHALGLAVILD
VVYNHLGPDGNYLGHFTNDYFTDRYKNDWGVAINFDGPGSAGVRAFYLANAGYWIEEFHLDGLRLDATQQIYDRSEPSIL
AEIAREVRAAAKGRNTFVVAENEPQEVRLIEDETAQGYGLDALWNDDLHHAAMVALTGRREAYYLDYLGSPQELISAAKW
GFLYAGQYYSWQRNGRGTTSFAIPGRAMVAFLQNHDQVANSARGLRLDKLSDEAQFRALTAYLLLIPATPMLFQGQEFRS
SAPFYYFADHGPKLAAMVKDGRADFLTQFPSIDQGWRSEDLPDPAAEATFERCKLDHREWQSHAEWVALHRDLLTLRRET
PAFAAQDCRRMEGAVLGPQTFVLRFFAEERLSDRLMLVNLGPQITLTPMAEPLLAPPMGKAWTTLWASSDQRYGGAGLTA
VERTPLWEIPARTTVVLGPGEKKPFIAPRTSG
>Mature_672_residues
MESPLTPPVAPAPRPPLSSLVAAPPAEDPPSARSVAAAPPPAPPVRRLPQGAEVQPGGGVHFRVWAPGRQAVTLCLENGA
AIAMTAEDDGSFAALVAEAGAGTAYRYRLEGVEALCPDPLARFQPEGPHGPSLVVDPAGFVWSDQAWAGVSHQGMVLYEM
HIGTFTPEGTWAAAMAHLERLRDLGVTCLEIMPIAEFSGRFGWGYDGVNLFAPTRLYGQPDDMRRFVDRAHALGLAVILD
VVYNHLGPDGNYLGHFTNDYFTDRYKNDWGVAINFDGPGSAGVRAFYLANAGYWIEEFHLDGLRLDATQQIYDRSEPSIL
AEIAREVRAAAKGRNTFVVAENEPQEVRLIEDETAQGYGLDALWNDDLHHAAMVALTGRREAYYLDYLGSPQELISAAKW
GFLYAGQYYSWQRNGRGTTSFAIPGRAMVAFLQNHDQVANSARGLRLDKLSDEAQFRALTAYLLLIPATPMLFQGQEFRS
SAPFYYFADHGPKLAAMVKDGRADFLTQFPSIDQGWRSEDLPDPAAEATFERCKLDHREWQSHAEWVALHRDLLTLRRET
PAFAAQDCRRMEGAVLGPQTFVLRFFAEERLSDRLMLVNLGPQITLTPMAEPLLAPPMGKAWTTLWASSDQRYGGAGLTA
VERTPLWEIPARTTVVLGPGEKKPFIAPRTSG

Specific function: Catalyzes The Formation Of The Alpha-1,6-Glucosidic Linkages In Glycogen By Scission Of A 1,4-Alpha-Linked Oligosaccharide From Growing Alpha-1,4-Glucan Chains And The Subsequent Attachment Of The Oligosaccharide To The Alpha-1,6 Position. Has A Preferenc

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=170, Percent_Identity=30.5882352941176, Blast_Score=82, Evalue=2e-15,
Organism=Escherichia coli, GI1789839, Length=485, Percent_Identity=27.8350515463918, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI2367229, Length=331, Percent_Identity=26.2839879154079, Blast_Score=69, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17554896, Length=168, Percent_Identity=30.3571428571429, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI32564391, Length=168, Percent_Identity=30.3571428571429, Blast_Score=79, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6320826, Length=174, Percent_Identity=27.0114942528736, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28573410, Length=294, Percent_Identity=23.8095238095238, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756
- InterPro:   IPR015156
- InterPro:   IPR012768 [H]

Pfam domain/function: PF09071 Alpha-amyl_C; PF00128 Alpha-amylase; PF02922 CBM_48 [H]

EC number: =3.2.1.141 [H]

Molecular weight: Translated: 73862; Mature: 73862

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESPLTPPVAPAPRPPLSSLVAAPPAEDPPSARSVAAAPPPAPPVRRLPQGAEVQPGGGV
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCE
HFRVWAPGRQAVTLCLENGAAIAMTAEDDGSFAALVAEAGAGTAYRYRLEGVEALCPDPL
EEEEECCCCEEEEEEEECCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCHHCCCCHH
ARFQPEGPHGPSLVVDPAGFVWSDQAWAGVSHQGMVLYEMHIGTFTPEGTWAAAMAHLER
HHCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH
LRDLGVTCLEIMPIAEFSGRFGWGYDGVNLFAPTRLYGQPDDMRRFVDRAHALGLAVILD
HHHCCCEEHHEEEHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
VVYNHLGPDGNYLGHFTNDYFTDRYKNDWGVAINFDGPGSAGVRAFYLANAGYWIEEFHL
HHHHHCCCCCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEEC
DGLRLDATQQIYDRSEPSILAEIAREVRAAAKGRNTFVVAENEPQEVRLIEDETAQGYGL
CCEEECHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCC
DALWNDDLHHAAMVALTGRREAYYLDYLGSPQELISAAKWGFLYAGQYYSWQRNGRGTTS
CEEECCCCHHEEEEEEECCCCEEEEECCCCHHHHHHHHHCCEEEECCEEEEECCCCCCEE
FAIPGRAMVAFLQNHDQVANSARGLRLDKLSDEAQFRALTAYLLLIPATPMLFQGQEFRS
EECCHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHCCCCCEECCHHHHC
SAPFYYFADHGPKLAAMVKDGRADFLTQFPSIDQGWRSEDLPDPAAEATFERCKLDHREW
CCCEEEEECCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHH
QSHAEWVALHRDLLTLRRETPAFAAQDCRRMEGAVLGPQTFVLRFFAEERLSDRLMLVNL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECHHHHHHHHHHHHHCCCCEEEEEC
GPQITLTPMAEPLLAPPMGKAWTTLWASSDQRYGGAGLTAVERTPLWEIPARTTVVLGPG
CCCEEECCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCEEECCCCCEECCCCEEEEECCC
EKKPFIAPRTSG
CCCCCCCCCCCC
>Mature Secondary Structure
MESPLTPPVAPAPRPPLSSLVAAPPAEDPPSARSVAAAPPPAPPVRRLPQGAEVQPGGGV
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCE
HFRVWAPGRQAVTLCLENGAAIAMTAEDDGSFAALVAEAGAGTAYRYRLEGVEALCPDPL
EEEEECCCCEEEEEEEECCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCHHCCCCHH
ARFQPEGPHGPSLVVDPAGFVWSDQAWAGVSHQGMVLYEMHIGTFTPEGTWAAAMAHLER
HHCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH
LRDLGVTCLEIMPIAEFSGRFGWGYDGVNLFAPTRLYGQPDDMRRFVDRAHALGLAVILD
HHHCCCEEHHEEEHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
VVYNHLGPDGNYLGHFTNDYFTDRYKNDWGVAINFDGPGSAGVRAFYLANAGYWIEEFHL
HHHHHCCCCCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEEC
DGLRLDATQQIYDRSEPSILAEIAREVRAAAKGRNTFVVAENEPQEVRLIEDETAQGYGL
CCEEECHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCC
DALWNDDLHHAAMVALTGRREAYYLDYLGSPQELISAAKWGFLYAGQYYSWQRNGRGTTS
CEEECCCCHHEEEEEEECCCCEEEEECCCCHHHHHHHHHCCEEEECCEEEEECCCCCCEE
FAIPGRAMVAFLQNHDQVANSARGLRLDKLSDEAQFRALTAYLLLIPATPMLFQGQEFRS
EECCHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHCCCCCEECCHHHHC
SAPFYYFADHGPKLAAMVKDGRADFLTQFPSIDQGWRSEDLPDPAAEATFERCKLDHREW
CCCEEEEECCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHH
QSHAEWVALHRDLLTLRRETPAFAAQDCRRMEGAVLGPQTFVLRFFAEERLSDRLMLVNL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECHHHHHHHHHHHHHCCCCEEEEEC
GPQITLTPMAEPLLAPPMGKAWTTLWASSDQRYGGAGLTAVERTPLWEIPARTTVVLGPG
CCCEEECCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCEEECCCCCEECCCCEEEEECCC
EKKPFIAPRTSG
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8899719; 11427726 [H]