Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

Click here to switch to the map view.

The map label for this gene is ynaD [H]

Identifier: 83593562

GI number: 83593562

Start: 2586494

End: 2587024

Strand: Direct

Name: ynaD [H]

Synonym: Rru_A2227

Alternate gene names: 83593562

Gene position: 2586494-2587024 (Clockwise)

Preceding gene: 83593561

Following gene: 83593565

Centisome position: 59.42

GC content: 56.12

Gene sequence:

>531_bases
ATGGACCCCATCCAAACCGACCGACTGATTCTGAGAAACTTCAAACAGGGAGACGCCGCTGATCTGCTTGCCTATTTACA
CCAACCCAGGGTGAGCTGCTTTTTGTCTCTCAAGCTGGAGGATCTTGGCGCGGCGGAAGCGGAAGTGAAAACGCGCAGCA
CAAGCGATGAGCATATCGCCGTCTGTTTGCGCACCCCCGACAAGCTGATCGGGGACATGTTCTGTATGGCAGAACCTCCC
GACACCTATTCCGTCGGGTGGAATTTTAATGCGGATTTCCAAGGCGCCGGCCTCGCCTCCGAAGCCGCGCGGGCTCTTTT
TGAGTACCTGTTCACGGTGAAAGAGGCCCGGCGCCTCTATGCCTTTGTCGAGGAGGACAACCTCCCTTCGCGGCGCTTGT
GCGAAAGACTGGGAATGAGGAAAGAGGGGCTGTTCAAAGAGTTCATATCCTTCAGGACGGATGACGAAGGCGTGCCGGTC
TTCGAAAACACGATGCAGTACGCCCTCTTGCGAAAAGAATGGGTGGCCTGA

Upstream 100 bases:

>100_bases
ATCTCTCAAGGGATCGGCGCCGTCCACCTTTTAGCCGGGTTTGACCCCTTTTACTCTTTTACTTCTTTTATTCCCCAAGA
CACCCCGCGTGAGGATTCGA

Downstream 100 bases:

>100_bases
CGATCACCGCGGCAAACAGCCCTCTCCCCCTAGCTTTCCGCCAGCACCACGCGGTCGCGGCCGCGCGCCTTGGCCTCGGC
CAGGGCCTTGTCGGCGGCGG

Product: GCN5-related N-acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MDPIQTDRLILRNFKQGDAADLLAYLHQPRVSCFLSLKLEDLGAAEAEVKTRSTSDEHIAVCLRTPDKLIGDMFCMAEPP
DTYSVGWNFNADFQGAGLASEAARALFEYLFTVKEARRLYAFVEEDNLPSRRLCERLGMRKEGLFKEFISFRTDDEGVPV
FENTMQYALLRKEWVA

Sequences:

>Translated_176_residues
MDPIQTDRLILRNFKQGDAADLLAYLHQPRVSCFLSLKLEDLGAAEAEVKTRSTSDEHIAVCLRTPDKLIGDMFCMAEPP
DTYSVGWNFNADFQGAGLASEAARALFEYLFTVKEARRLYAFVEEDNLPSRRLCERLGMRKEGLFKEFISFRTDDEGVPV
FENTMQYALLRKEWVA
>Mature_176_residues
MDPIQTDRLILRNFKQGDAADLLAYLHQPRVSCFLSLKLEDLGAAEAEVKTRSTSDEHIAVCLRTPDKLIGDMFCMAEPP
DTYSVGWNFNADFQGAGLASEAARALFEYLFTVKEARRLYAFVEEDNLPSRRLCERLGMRKEGLFKEFISFRTDDEGVPV
FENTMQYALLRKEWVA

Specific function: Unknown

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: NA

Molecular weight: Translated: 20113; Mature: 20113

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPIQTDRLILRNFKQGDAADLLAYLHQPRVSCFLSLKLEDLGAAEAEVKTRSTSDEHIA
CCCCCHHHHHHHHCCCCCHHHHHHHHHCCHHEEEEEEEHHHCCCCHHHHHCCCCCCCEEE
VCLRTPDKLIGDMFCMAEPPDTYSVGWNFNADFQGAGLASEAARALFEYLFTVKEARRLY
EEECCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AFVEEDNLPSRRLCERLGMRKEGLFKEFISFRTDDEGVPVFENTMQYALLRKEWVA
HHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDPIQTDRLILRNFKQGDAADLLAYLHQPRVSCFLSLKLEDLGAAEAEVKTRSTSDEHIA
CCCCCHHHHHHHHCCCCCHHHHHHHHHCCHHEEEEEEEHHHCCCCHHHHHCCCCCCCEEE
VCLRTPDKLIGDMFCMAEPPDTYSVGWNFNADFQGAGLASEAARALFEYLFTVKEARRLY
EEECCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AFVEEDNLPSRRLCERLGMRKEGLFKEFISFRTDDEGVPVFENTMQYALLRKEWVA
HHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]