| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is tatC [H]
Identifier: 83593106
GI number: 83593106
Start: 2063647
End: 2064618
Strand: Reverse
Name: tatC [H]
Synonym: Rru_A1771
Alternate gene names: 83593106
Gene position: 2064618-2063647 (Counterclockwise)
Preceding gene: 83593107
Following gene: 83593105
Centisome position: 47.43
GC content: 60.91
Gene sequence:
>972_bases ATGGCTCCGGCGGACGCGACGCGCGACGAAGATTCCGACCTTGAAGACAAGAAAATGCCGCTGATCGATCATCTGATCGA ACTGCGCAGCCGTCTTTTATGGTCGACGGTGTTCTTCCTTGTCGCCTTTTTCGCCTGTTTCGCCTATGCCCAGGAAATCT ATAATATTCTGGTCTTGCCGCTTGCCCGGGTGATGGAGCGGGTGGGCGGGTCGCAGCGCATGATCTATACCGCGCTGACC GAGGCGTTTTTCACCTATGTCAAGGTTGGCGCCTTTGGCGCGATCGTGCTCAGCTTTCCGCTGATCGCCACCCAGATCTG GATGTTCGTGGCTCCCGGATTGTACCGCCACGAGAAGCGCGCCTTTCTGCCGTTCCTCATCGTCAGCCCGATGTTGTTCA TCCTTGGGGCGGCGATGGTTTATTATCTTGTTATGCCAATGGCTTGGTCGTTCTTGCTCGGCTTTCAGACGACGCGCGAG CAAACCGTTTTGCCGATCCAGCTGGAAGCCAAGGTCGGCGAATATCTTGGCTTGGTGATGAAGCTGATCCTGGCTTTCGG CTTCAGCTTCCAGATGCCCGTCGCCCTGACGCTGATGGCCCGGGTTGGGCTGGTCACCTCGCGCGGGCTGGCCAAGGCGC GCAAATACGCCATCGTCGCCGTTTTCGCCGGCGCCGCCGTCATCACCCCCCCCGACATCATGAGCCAGGTGATGCTGGCC ATTCCGCTGCTGGTCCTCTACGAGCTTTCGATCGTCGCGGCGCGGATGGTGGAAAAGAGCAAGGGGATCGAAGACGACGA TCTTGAGAATCTCGACGACGACGAGCCCCCTCCGGCGGCCGCAGCGCCGTCGACCGCCCATAAGCGGGGCGGGACCACGG CCTTGGCCGCTCCGCTTGCCCGCGATGAAGAGGCCGGGGCCGACGGCGATCCGGGGCGCTTCGAAGAGACCGACTGGAAT CATGGGCATTAG
Upstream 100 bases:
>100_bases CCCGTCGGCCGGGCCTGATCGACGGACCGACGGCTCCCTTCCGCCGCAAGACTAAAACCGGCCCCGGTTTCCCCGGGGCG GTCGTTTATCGAGGAAAAAT
Downstream 100 bases:
>100_bases CCCGCTATAAAGACGACCCTGCGCCTTTTTTCCGCCACACCTCTTGCCGCCTCGCAGACCCCCACACGCCAGCCGACGGA CGAACCGAGATGCACGACCT
Product: Sec-independent protein translocase TatC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MAPADATRDEDSDLEDKKMPLIDHLIELRSRLLWSTVFFLVAFFACFAYAQEIYNILVLPLARVMERVGGSQRMIYTALT EAFFTYVKVGAFGAIVLSFPLIATQIWMFVAPGLYRHEKRAFLPFLIVSPMLFILGAAMVYYLVMPMAWSFLLGFQTTRE QTVLPIQLEAKVGEYLGLVMKLILAFGFSFQMPVALTLMARVGLVTSRGLAKARKYAIVAVFAGAAVITPPDIMSQVMLA IPLLVLYELSIVAARMVEKSKGIEDDDLENLDDDEPPPAAAAPSTAHKRGGTTALAAPLARDEEAGADGDPGRFEETDWN HGH
Sequences:
>Translated_323_residues MAPADATRDEDSDLEDKKMPLIDHLIELRSRLLWSTVFFLVAFFACFAYAQEIYNILVLPLARVMERVGGSQRMIYTALT EAFFTYVKVGAFGAIVLSFPLIATQIWMFVAPGLYRHEKRAFLPFLIVSPMLFILGAAMVYYLVMPMAWSFLLGFQTTRE QTVLPIQLEAKVGEYLGLVMKLILAFGFSFQMPVALTLMARVGLVTSRGLAKARKYAIVAVFAGAAVITPPDIMSQVMLA IPLLVLYELSIVAARMVEKSKGIEDDDLENLDDDEPPPAAAAPSTAHKRGGTTALAAPLARDEEAGADGDPGRFEETDWN HGH >Mature_322_residues APADATRDEDSDLEDKKMPLIDHLIELRSRLLWSTVFFLVAFFACFAYAQEIYNILVLPLARVMERVGGSQRMIYTALTE AFFTYVKVGAFGAIVLSFPLIATQIWMFVAPGLYRHEKRAFLPFLIVSPMLFILGAAMVYYLVMPMAWSFLLGFQTTREQ TVLPIQLEAKVGEYLGLVMKLILAFGFSFQMPVALTLMARVGLVTSRGLAKARKYAIVAVFAGAAVITPPDIMSQVMLAI PLLVLYELSIVAARMVEKSKGIEDDDLENLDDDEPPPAAAAPSTAHKRGGTTALAAPLARDEEAGADGDPGRFEETDWNH GH
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family [H]
Homologues:
Organism=Escherichia coli, GI2367313, Length=256, Percent_Identity=37.890625, Blast_Score=173, Evalue=1e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 [H]
Pfam domain/function: PF00902 TatC [H]
EC number: NA
Molecular weight: Translated: 35615; Mature: 35484
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS01218 TATC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPADATRDEDSDLEDKKMPLIDHLIELRSRLLWSTVFFLVAFFACFAYAQEIYNILVLP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LARVMERVGGSQRMIYTALTEAFFTYVKVGAFGAIVLSFPLIATQIWMFVAPGLYRHEKR HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AFLPFLIVSPMLFILGAAMVYYLVMPMAWSFLLGFQTTREQTVLPIQLEAKVGEYLGLVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHH KLILAFGFSFQMPVALTLMARVGLVTSRGLAKARKYAIVAVFAGAAVITPPDIMSQVMLA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHH IPLLVLYELSIVAARMVEKSKGIEDDDLENLDDDEPPPAAAAPSTAHKRGGTTALAAPLA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHCCC RDEEAGADGDPGRFEETDWNHGH CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure APADATRDEDSDLEDKKMPLIDHLIELRSRLLWSTVFFLVAFFACFAYAQEIYNILVLP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LARVMERVGGSQRMIYTALTEAFFTYVKVGAFGAIVLSFPLIATQIWMFVAPGLYRHEKR HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AFLPFLIVSPMLFILGAAMVYYLVMPMAWSFLLGFQTTREQTVLPIQLEAKVGEYLGLVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHH KLILAFGFSFQMPVALTLMARVGLVTSRGLAKARKYAIVAVFAGAAVITPPDIMSQVMLA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHH IPLLVLYELSIVAARMVEKSKGIEDDDLENLDDDEPPPAAAAPSTAHKRGGTTALAAPLA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHCCC RDEEAGADGDPGRFEETDWNHGH CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]