Click here to switch to the map view.

The map label for this gene is 83592168

Identifier: 83592168

GI number: 83592168

Start: 987157

End: 987843

Strand: Direct

Name: 83592168

Synonym: Rru_A0832

Alternate gene names: NA

Gene position: 987157-987843 (Clockwise)

Preceding gene: 83592167

Following gene: 83592169

Centisome position: 22.68

GC content: 65.94

Gene sequence:

>687_bases
ATGGCCGAGGGGGATCAACCCAAGGACGAGGCGGGATGGCAGGGCGAGCCCATTCCGCTTTCGGCCCTGCAGCATGCGGT
TTATTGCCTGCGTCAGGCGGCGCTGATTCATCTGGAACGGCTGTGGGAGGAAAACCGCTTCACCGCCGAAGGACACGTGC
TGCACATCACGGCCGACAAGATGGGCGGCCGCAAGATCCGCGGCACCCGGCGGGTCATGGCCCTGCCGCTGGCGGCAAAA
AGCCTAGGGATCGCCGGCGTTGGCGATCTGGTCGAGTTCCGCGGCGAAGCCGATGGTACGGAAACGCCCTATCCCGTGGA
ATACAAGCGCGGAAAAGCCAAGCTTCACCCCGCCGACGAGGTGCAGCTTTGCGCCCAGGGCTTGTGCCTGGAGGAGATGA
CCGGGCAGGCGGTGCCCGAGGGGGCGCTGTACTACGGCGAAACCAAGCGCCGGGTCGTCGTGCCTTTCGACCCGCCTTTG
CGCGATCTGACGGTGCGGACGATCGAGGAGTTGCGCGGTGTTTTCACCACGTTGAAAACACCGCCGGCGCTGTTTCGCGC
CGACCGCTGCCGGGGCTGCTCGCTGATCGATCTCTGCCGACCAAAAGCCACGGCCAAACCGGCGCGGTCCTGGCGGCAGC
GAACCTTGGCGTCGCTGCTGTCTGACGAAGAGGGGACCGGGGCATGA

Upstream 100 bases:

>100_bases
CGCGCAGTTTCGGCGATTACCGGGTGACTATCGGTCGCGAAGGGCTTCCCGAAGGCGTCGAGATCATCGAGCGCCTTTAG
GCGAAGGGTGTCCGGTGGCT

Downstream 100 bases:

>100_bases
AAAAGCTGTTGAACACCGTTTACGTCACCACCGAGGGAACGGGGTTGCGCAAGGACGGTGAAAATCTGGTCGCCGAGCTT
GACGGCGTGCAAAAGGGCCG

Product: CRISPR-associated exonuclease Cas4 family protein

Products: NA

Alternate protein names: CRISPR-Associated Exonuclease Cas4 Family Protein; RecB Family Exonuclease; CRISPR-Associated Cas1/Cas4 Family Protein; CRISPR-Associated Exonuclease Cas4 Family; Endonuclease; Exonuclease RecB Family Protein; CRISPR-Associated Cas1 Family Protein; CRISPR-Associated Protein; Protein Be Involved In DNA Repair; Cas4 Family CRISPR-Associated Protein; Exonuclease N; PE-PGRS Family Protein; CRISPR-Associated RecB Family Exonuclease Cas4b; RecB Family Exonuclease Protein

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MAEGDQPKDEAGWQGEPIPLSALQHAVYCLRQAALIHLERLWEENRFTAEGHVLHITADKMGGRKIRGTRRVMALPLAAK
SLGIAGVGDLVEFRGEADGTETPYPVEYKRGKAKLHPADEVQLCAQGLCLEEMTGQAVPEGALYYGETKRRVVVPFDPPL
RDLTVRTIEELRGVFTTLKTPPALFRADRCRGCSLIDLCRPKATAKPARSWRQRTLASLLSDEEGTGA

Sequences:

>Translated_228_residues
MAEGDQPKDEAGWQGEPIPLSALQHAVYCLRQAALIHLERLWEENRFTAEGHVLHITADKMGGRKIRGTRRVMALPLAAK
SLGIAGVGDLVEFRGEADGTETPYPVEYKRGKAKLHPADEVQLCAQGLCLEEMTGQAVPEGALYYGETKRRVVVPFDPPL
RDLTVRTIEELRGVFTTLKTPPALFRADRCRGCSLIDLCRPKATAKPARSWRQRTLASLLSDEEGTGA
>Mature_227_residues
AEGDQPKDEAGWQGEPIPLSALQHAVYCLRQAALIHLERLWEENRFTAEGHVLHITADKMGGRKIRGTRRVMALPLAAKS
LGIAGVGDLVEFRGEADGTETPYPVEYKRGKAKLHPADEVQLCAQGLCLEEMTGQAVPEGALYYGETKRRVVVPFDPPLR
DLTVRTIEELRGVFTTLKTPPALFRADRCRGCSLIDLCRPKATAKPARSWRQRTLASLLSDEEGTGA

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25129; Mature: 24998

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEGDQPKDEAGWQGEPIPLSALQHAVYCLRQAALIHLERLWEENRFTAEGHVLHITADK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCC
MGGRKIRGTRRVMALPLAAKSLGIAGVGDLVEFRGEADGTETPYPVEYKRGKAKLHPADE
CCCEECCCCHHHEEECHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
VQLCAQGLCLEEMTGQAVPEGALYYGETKRRVVVPFDPPLRDLTVRTIEELRGVFTTLKT
HHHHHHCCCHHHHCCCCCCCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
PPALFRADRCRGCSLIDLCRPKATAKPARSWRQRTLASLLSDEEGTGA
CHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AEGDQPKDEAGWQGEPIPLSALQHAVYCLRQAALIHLERLWEENRFTAEGHVLHITADK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCC
MGGRKIRGTRRVMALPLAAKSLGIAGVGDLVEFRGEADGTETPYPVEYKRGKAKLHPADE
CCCEECCCCHHHEEECHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
VQLCAQGLCLEEMTGQAVPEGALYYGETKRRVVVPFDPPLRDLTVRTIEELRGVFTTLKT
HHHHHHCCCHHHHCCCCCCCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
PPALFRADRCRGCSLIDLCRPKATAKPARSWRQRTLASLLSDEEGTGA
CHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA