Click here to switch to the map view.

The map label for this gene is dsvB [H]

Identifier: 83590440

GI number: 83590440

Start: 1635185

End: 1636372

Strand: Reverse

Name: dsvB [H]

Synonym: Moth_1600

Alternate gene names: 83590440

Gene position: 1636372-1635185 (Counterclockwise)

Preceding gene: 83590441

Following gene: 83590439

Centisome position: 62.25

GC content: 54.63

Gene sequence:

>1188_bases
ATGGCATTATCACAAGGGAGACTGGGTAAATACAACCCGGAGAAACCGACGGAAAACAGGATTACGGATATCGGTCCCAG
GCACTTTTGGGATTTCTTCCCACCGGTTATCCAGAAAAACTACGGCAAGTGGGCTTATCATGACATCCTGGAACCCGGTA
TCATGGTCCATGTCTCCGAGACCGGGGACAAGGTCTTTACCGTGCGTTGCGGCGGCTCACGACTTATGACGGCGGAAAAT
ATCCGGGAGATCTGCGACATTGCCGATAAATACTGCGATGGTTATGTGCGCTTTACCACCCGGAATAATATTGAATTCAT
GGTAACAAGTTATGAAAAAGTCCAGGAGTTGAAGAAAGACCTCCTGAGCCGGAAATACATCTCCGGGAGCTACAAATTTC
CCATCGGCGGCACCGGCGCCGGGGTTACCAACATCGTTCATACCCAGGGCTATATCCATTGCCATACCCCGGCAACCGAC
GCTTCCTCCATGGTCAAGGCAGTCATGGATGAACTCATGGACTACTTCACCGGCATGACCCTGCCGGCCCACGTCCGGAT
TTCCATGGCCTGCTGCCTGAATATGTGCGGCGCCGTTCACTGCTCGGATATTGCCCTCCTGGGCATCCACAGGAAACCGC
CGATTGTAGACGATAATATTGATTCCATTTGTGAAATACCCCTGGCCATTGCCGCCTGTCCCGTGGGTGCCATCTCGCCG
GCCAAGACGGAAGACGGCCGGAAGTCGGTGAAGATCAAAGAAGATCGGTGCATGTTCTGCGGCAATTGCTATACCATGTG
CCCGGCCCTGCCTCTGGCCGACAAGGAGGGCGACGGCGTGACCATCCTGGCCGGCGGCAAGATCTCCAACCGGATCAGCG
AGCCCAAGTTCTCCAAGGTCATTGTTCCCTGGTTGCCCAACAACTTCCCCCGCTTCCCGGAAGTGGTGGCCACAGTTAAG
AAGATCATCGAAGTCTATGCCGCCAATGCCCGCAAGTACGAGCGCATTGGTGACTGGGCGGAGAGAATCGGCTGGGAGAA
GTTCTTCGAGCTGTGTGATTTGCCCTTTACCGAGCACCTCATTGATGATTACCGCCTGGCCTATGATACCTACCGGACCA
GCACCCAGTTTAAATTCACCGGAAAAGCCTGGGAAGTTTCCAGGGCGGCAGGGGGTATCGACGACTAG

Upstream 100 bases:

>100_bases
CAATCCTTATATCTTCTGGAAGGAAGAAGACGTACCCGGCGGCTGGAAACGCGATATCAACGAATACCGGCAGCGGCACA
AGAGATAGGGGGTTATATAT

Downstream 100 bases:

>100_bases
ACCTGCCTGAGATAAGGGGGTAACAATTATGATGGAAGATATCAAAGCAGCAATCCTGGATTTTGCCGCCAACAGCAAGA
AGAGCAAGTTTTACTTCAAA

Product: sulfite reductase, dissimilatory-type beta subunit

Products: NA

Alternate protein names: Desulfoviridin subunit beta; Hydrogensulfite reductase subunit beta [H]

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MALSQGRLGKYNPEKPTENRITDIGPRHFWDFFPPVIQKNYGKWAYHDILEPGIMVHVSETGDKVFTVRCGGSRLMTAEN
IREICDIADKYCDGYVRFTTRNNIEFMVTSYEKVQELKKDLLSRKYISGSYKFPIGGTGAGVTNIVHTQGYIHCHTPATD
ASSMVKAVMDELMDYFTGMTLPAHVRISMACCLNMCGAVHCSDIALLGIHRKPPIVDDNIDSICEIPLAIAACPVGAISP
AKTEDGRKSVKIKEDRCMFCGNCYTMCPALPLADKEGDGVTILAGGKISNRISEPKFSKVIVPWLPNNFPRFPEVVATVK
KIIEVYAANARKYERIGDWAERIGWEKFFELCDLPFTEHLIDDYRLAYDTYRTSTQFKFTGKAWEVSRAAGGIDD

Sequences:

>Translated_395_residues
MALSQGRLGKYNPEKPTENRITDIGPRHFWDFFPPVIQKNYGKWAYHDILEPGIMVHVSETGDKVFTVRCGGSRLMTAEN
IREICDIADKYCDGYVRFTTRNNIEFMVTSYEKVQELKKDLLSRKYISGSYKFPIGGTGAGVTNIVHTQGYIHCHTPATD
ASSMVKAVMDELMDYFTGMTLPAHVRISMACCLNMCGAVHCSDIALLGIHRKPPIVDDNIDSICEIPLAIAACPVGAISP
AKTEDGRKSVKIKEDRCMFCGNCYTMCPALPLADKEGDGVTILAGGKISNRISEPKFSKVIVPWLPNNFPRFPEVVATVK
KIIEVYAANARKYERIGDWAERIGWEKFFELCDLPFTEHLIDDYRLAYDTYRTSTQFKFTGKAWEVSRAAGGIDD
>Mature_394_residues
ALSQGRLGKYNPEKPTENRITDIGPRHFWDFFPPVIQKNYGKWAYHDILEPGIMVHVSETGDKVFTVRCGGSRLMTAENI
REICDIADKYCDGYVRFTTRNNIEFMVTSYEKVQELKKDLLSRKYISGSYKFPIGGTGAGVTNIVHTQGYIHCHTPATDA
SSMVKAVMDELMDYFTGMTLPAHVRISMACCLNMCGAVHCSDIALLGIHRKPPIVDDNIDSICEIPLAIAACPVGAISPA
KTEDGRKSVKIKEDRCMFCGNCYTMCPALPLADKEGDGVTILAGGKISNRISEPKFSKVIVPWLPNNFPRFPEVVATVKK
IIEVYAANARKYERIGDWAERIGWEKFFELCDLPFTEHLIDDYRLAYDTYRTSTQFKFTGKAWEVSRAAGGIDD

Specific function: Catalyzes the reduction of sulfite to sulfide. This is the terminal oxidation reaction in sulfate respiration, a process catalyzed by the sulfate-reducing bacteria [H]

COG id: COG2221

COG function: function code C; Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011808
- InterPro:   IPR005117
- InterPro:   IPR006067 [H]

Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]

EC number: =1.8.99.3 [H]

Molecular weight: Translated: 44261; Mature: 44130

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSQGRLGKYNPEKPTENRITDIGPRHFWDFFPPVIQKNYGKWAYHDILEPGIMVHVSE
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHCCCCCHHHHHHCCCCEEEEEEC
TGDKVFTVRCGGSRLMTAENIREICDIADKYCDGYVRFTTRNNIEFMVTSYEKVQELKKD
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECHHHHHHHHHH
LLSRKYISGSYKFPIGGTGAGVTNIVHTQGYIHCHTPATDASSMVKAVMDELMDYFTGMT
HHHHHHCCCCEECCCCCCCCCHHHEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
LPAHVRISMACCLNMCGAVHCSDIALLGIHRKPPIVDDNIDSICEIPLAIAACPVGAISP
CCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
AKTEDGRKSVKIKEDRCMFCGNCYTMCPALPLADKEGDGVTILAGGKISNRISEPKFSKV
CCCCCCCCCEEECCCCEEECCCHHHHCCCCCCCCCCCCCEEEEECCCHHCCCCCCCCCEE
IVPWLPNNFPRFPEVVATVKKIIEVYAANARKYERIGDWAERIGWEKFFELCDLPFTEHL
EECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHCCCHHHHH
IDDYRLAYDTYRTSTQFKFTGKAWEVSRAAGGIDD
HHHHHHHHHHHCCCCEEEECCCCEEEHHCCCCCCC
>Mature Secondary Structure 
ALSQGRLGKYNPEKPTENRITDIGPRHFWDFFPPVIQKNYGKWAYHDILEPGIMVHVSE
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHCCCCCHHHHHHCCCCEEEEEEC
TGDKVFTVRCGGSRLMTAENIREICDIADKYCDGYVRFTTRNNIEFMVTSYEKVQELKKD
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECHHHHHHHHHH
LLSRKYISGSYKFPIGGTGAGVTNIVHTQGYIHCHTPATDASSMVKAVMDELMDYFTGMT
HHHHHHCCCCEECCCCCCCCCHHHEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
LPAHVRISMACCLNMCGAVHCSDIALLGIHRKPPIVDDNIDSICEIPLAIAACPVGAISP
CCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
AKTEDGRKSVKIKEDRCMFCGNCYTMCPALPLADKEGDGVTILAGGKISNRISEPKFSKV
CCCCCCCCCEEECCCCEEECCCHHHHCCCCCCCCCCCCCEEEEECCCHHCCCCCCCCCEE
IVPWLPNNFPRFPEVVATVKKIIEVYAANARKYERIGDWAERIGWEKFFELCDLPFTEHL
EECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHCCCHHHHH
IDDYRLAYDTYRTSTQFKFTGKAWEVSRAAGGIDD
HHHHHHHHHHHCCCCEEEECCCCEEEHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7887608; 1555572 [H]