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The map label for this gene is 83590417

Identifier: 83590417

GI number: 83590417

Start: 1611430

End: 1611828

Strand: Reverse

Name: 83590417

Synonym: Moth_1576

Alternate gene names: NA

Gene position: 1611828-1611430 (Counterclockwise)

Preceding gene: 83590418

Following gene: 83590416

Centisome position: 61.31

GC content: 44.86

Gene sequence:

>399_bases
ATGAACAGTAGGGAGAGGGAACAAGAAGCCTTGAAATGGCAGGATAGGGCGAGAAGGGACCTGCGGGTGGCGAAGATGCT
TTTTTATGATAAAGAACCGGAATTTGATCTGGCTTGTTACTTATCACAGCAATGTGCCGAAAAAAGTTTGAAAGCCCTCT
TAATCCGCCTTGGGATAAGGTTCGCTTATAAACATGACCTTGATTACCTGGTGGGGTTATTACCACCGGAGGATCAAGAG
AAATTTTATAACACAAGATTGGAATGGCTAAGCGGATGGGTTACTGAAGGCCGTTATCCTGGAGACGCAGCAGGAGCAAC
CAGGGAAGATGCCCAAAGAGCAATTGAGATAGCAGAAGCTATATACAATAATGTTTCCAAGGCTTTGCGAAGCGAATAA

Upstream 100 bases:

>100_bases
CCTAAAGATATTGTAATTGCTAGCCCGGAGGACATAAACAAGTATAAAGATGCCTGGTGGACCGTTTACCATCCTGCCCT
TGAAGAAGGGAAGGTTCTTT

Downstream 100 bases:

>100_bases
AGTACCGGTACGCCGGTGCTTTTTGATTCCTACCAAAGTAATGGAGGCTGATACCATGCCCCGTAAAATTAACCTTCTCA
TTGCTTTCCTCCTGGCCGTG

Product: HEPN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MNSREREQEALKWQDRARRDLRVAKMLFYDKEPEFDLACYLSQQCAEKSLKALLIRLGIRFAYKHDLDYLVGLLPPEDQE
KFYNTRLEWLSGWVTEGRYPGDAAGATREDAQRAIEIAEAIYNNVSKALRSE

Sequences:

>Translated_132_residues
MNSREREQEALKWQDRARRDLRVAKMLFYDKEPEFDLACYLSQQCAEKSLKALLIRLGIRFAYKHDLDYLVGLLPPEDQE
KFYNTRLEWLSGWVTEGRYPGDAAGATREDAQRAIEIAEAIYNNVSKALRSE
>Mature_132_residues
MNSREREQEALKWQDRARRDLRVAKMLFYDKEPEFDLACYLSQQCAEKSLKALLIRLGIRFAYKHDLDYLVGLLPPEDQE
KFYNTRLEWLSGWVTEGRYPGDAAGATREDAQRAIEIAEAIYNNVSKALRSE

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15434; Mature: 15434

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSREREQEALKWQDRARRDLRVAKMLFYDKEPEFDLACYLSQQCAEKSLKALLIRLGIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FAYKHDLDYLVGLLPPEDQEKFYNTRLEWLSGWVTEGRYPGDAAGATREDAQRAIEIAEA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
IYNNVSKALRSE
HHHHHHHHHHCC
>Mature Secondary Structure
MNSREREQEALKWQDRARRDLRVAKMLFYDKEPEFDLACYLSQQCAEKSLKALLIRLGIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FAYKHDLDYLVGLLPPEDQEKFYNTRLEWLSGWVTEGRYPGDAAGATREDAQRAIEIAEA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
IYNNVSKALRSE
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA