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The map label for this gene is rsbS [H]

Identifier: 83590318

GI number: 83590318

Start: 1522783

End: 1523154

Strand: Reverse

Name: rsbS [H]

Synonym: Moth_1474

Alternate gene names: 83590318

Gene position: 1523154-1522783 (Counterclockwise)

Preceding gene: 83590319

Following gene: 83590317

Centisome position: 57.94

GC content: 48.66

Gene sequence:

>372_bases
ATGAGTAGCCGGGTGCCCATCCTGAAAGTGGACGATTACTGGGTAGTGGCCATTGAAGAAACCCTGCACGATCAAAGCGT
TATCCAGTTTAAAGAGGAATTATTACATAATATCACCGGGGTTGCGGGTAAAGGCCTGGTAATTGATATCAGTGCCCTAG
AAGTGGTGGATAGTTTTGTGACCAGGGTACTCATAGAAATCAGCAGGCTGGCTGAATTGCTGGGGCTGCCTTTTGTCCTA
ACAGGTATCAAACCGGCTGTAGCCATCACTTTGACGGAGATGGGCCTGGATCTCCGGGGCATGGCGACGGCATTAAACCT
GCAAAAAGGGCTGGATAAACTTAAAAATCTAGCCCGAATGGAGCAGCGATAA

Upstream 100 bases:

>100_bases
ATCGATTTTCCGGATATTATTACCAAAAATAACCTCCACGCCGGGCTGGAACTGGCCTTTCGCTGGCTGGGCTACAGGCT
GGAGCGGGTGGAGCACGACC

Downstream 100 bases:

>100_bases
TATGAATCTCAAACAAACCCTCCCCATCACCAGCGAATATGATATAATTACCGCCCGGCAAGCGGCGCGGGAAATAGCCC
GGCAAATCGGTTTTAATACC

Product: anti-sigma-factor antagonist domain-containing protein

Products: NA

Alternate protein names: Stressosome protein rsbS [H]

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MSSRVPILKVDDYWVVAIEETLHDQSVIQFKEELLHNITGVAGKGLVIDISALEVVDSFVTRVLIEISRLAELLGLPFVL
TGIKPAVAITLTEMGLDLRGMATALNLQKGLDKLKNLARMEQR

Sequences:

>Translated_123_residues
MSSRVPILKVDDYWVVAIEETLHDQSVIQFKEELLHNITGVAGKGLVIDISALEVVDSFVTRVLIEISRLAELLGLPFVL
TGIKPAVAITLTEMGLDLRGMATALNLQKGLDKLKNLARMEQR
>Mature_122_residues
SSRVPILKVDDYWVVAIEETLHDQSVIQFKEELLHNITGVAGKGLVIDISALEVVDSFVTRVLIEISRLAELLGLPFVLT
GIKPAVAITLTEMGLDLRGMATALNLQKGLDKLKNLARMEQR

Specific function: Negative regulator of sigma-B activity. Non- phosphorylated rsbS binds to rsbT, preventing its association with rsbU. Requires any one of rsbRA, rsbRB, rsbRC or rsbRD to sequester rsbT. When rsbS and the rsbR paralog(s) are phosphorylated, they release rs

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645 [H]

Pfam domain/function: PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 13566; Mature: 13435

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRVPILKVDDYWVVAIEETLHDQSVIQFKEELLHNITGVAGKGLVIDISALEVVDSFV
CCCCCCEEEECCEEEEEEHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH
TRVLIEISRLAELLGLPFVLTGIKPAVAITLTEMGLDLRGMATALNLQKGLDKLKNLARM
HHHHHHHHHHHHHHCCCHHHHCCCCHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
EQR
CCC
>Mature Secondary Structure 
SSRVPILKVDDYWVVAIEETLHDQSVIQFKEELLHNITGVAGKGLVIDISALEVVDSFV
CCCCCEEEECCEEEEEEHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH
TRVLIEISRLAELLGLPFVLTGIKPAVAITLTEMGLDLRGMATALNLQKGLDKLKNLARM
HHHHHHHHHHHHHHCCCHHHHCCCCHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
EQR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8002610; 9384377; 8824586; 8682789 [H]