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The map label for this gene is rpfG [H]

Identifier: 83590314

GI number: 83590314

Start: 1519481

End: 1520254

Strand: Reverse

Name: rpfG [H]

Synonym: Moth_1470

Alternate gene names: 83590314

Gene position: 1520254-1519481 (Counterclockwise)

Preceding gene: 83590315

Following gene: 83590313

Centisome position: 57.83

GC content: 58.91

Gene sequence:

>774_bases
TTGCCGGGCTACATCGGCGCTATTCGCAATTATGCCTGCTTTTATGAGGGGACCCTGCTAGTAGCTGCCTTTAATTACCC
GGCGCGGGTCACGGCCTATGAGCGGGATGTCCTGCAGAATCTGCTGACCTATAGCCGCTTCTTGCAGCTGGTGGCGGGGC
AAATCCGGGATACGGAGGAGGCCTTTCACTATACCATCCAGGCCCTGGCCCGGGCCGCCGAGGCCAATGACGACGATACG
GGTAATCAGATCGTCCGGGTGGGCAGCTTTGCCCGGGAGCTGGCCCGGGGCCTTGGCTGCCTGCCAAATTTCTGCCGGGA
GATCGCCCTGGCGGCCCAGATGCACGACGTGGAGAAGATTCATATCCATCCCGATATTTTACGGAAACCGGGCCGGTTAA
CCCCGGATGAATGGCGGCTGATGCAGCAGCATACCATTTATGGCGCCAGGATCTTAGGAGATGCCCCCCGGTTGCAGATG
GCCCGGGAAGTGGCCCTGCACCACCATGAAAAATGGGACGGCAGCGGCTATCCGGCCGGCTTGCAGGGTGAGGCTATTTA
CCTGGCAGGCAGGATTGTGGCCCTAGCCGACATTTATGACGCCTTGAGAAATAAGCGCAGCTATAAACCTGCTTTTAGCC
ATCAGGAAGCCTGCCGCATTATTACTGTGGGCGATGGGCGGGTCCAGCCGGGACACTTCGACCCGGCGGTTCTGGCGACC
TTCCAGCGGATTGCCTCCCACCTGGAGGAGATTTATGAAACCTTGAAGGATTGA

Upstream 100 bases:

>100_bases
AGCTATGTGGCTCTGTACCCTCTGGCAGACGGTAAAGCCGTTGCATCATGATATCCAGGAGAATGAGGTCTGGATAGCAA
ATCAATTTTTTTAATCTCAA

Downstream 100 bases:

>100_bases
AAGGTGGGTGATAAAGCTTATCATCGTCCCAGCGAAAAGAAAAAAGTTTGCTGGAATTTGGAGGATATCCGGGATATATA
GCGAAGTAAAAACAAAAAAC

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MPGYIGAIRNYACFYEGTLLVAAFNYPARVTAYERDVLQNLLTYSRFLQLVAGQIRDTEEAFHYTIQALARAAEANDDDT
GNQIVRVGSFARELARGLGCLPNFCREIALAAQMHDVEKIHIHPDILRKPGRLTPDEWRLMQQHTIYGARILGDAPRLQM
AREVALHHHEKWDGSGYPAGLQGEAIYLAGRIVALADIYDALRNKRSYKPAFSHQEACRIITVGDGRVQPGHFDPAVLAT
FQRIASHLEEIYETLKD

Sequences:

>Translated_257_residues
MPGYIGAIRNYACFYEGTLLVAAFNYPARVTAYERDVLQNLLTYSRFLQLVAGQIRDTEEAFHYTIQALARAAEANDDDT
GNQIVRVGSFARELARGLGCLPNFCREIALAAQMHDVEKIHIHPDILRKPGRLTPDEWRLMQQHTIYGARILGDAPRLQM
AREVALHHHEKWDGSGYPAGLQGEAIYLAGRIVALADIYDALRNKRSYKPAFSHQEACRIITVGDGRVQPGHFDPAVLAT
FQRIASHLEEIYETLKD
>Mature_256_residues
PGYIGAIRNYACFYEGTLLVAAFNYPARVTAYERDVLQNLLTYSRFLQLVAGQIRDTEEAFHYTIQALARAAEANDDDTG
NQIVRVGSFARELARGLGCLPNFCREIALAAQMHDVEKIHIHPDILRKPGRLTPDEWRLMQQHTIYGARILGDAPRLQMA
REVALHHHEKWDGSGYPAGLQGEAIYLAGRIVALADIYDALRNKRSYKPAFSHQEACRIITVGDGRVQPGHFDPAVLATF
QRIASHLEEIYETLKD

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 28932; Mature: 28801

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGYIGAIRNYACFYEGTLLVAAFNYPARVTAYERDVLQNLLTYSRFLQLVAGQIRDTEE
CCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AFHYTIQALARAAEANDDDTGNQIVRVGSFARELARGLGCLPNFCREIALAAQMHDVEKI
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEE
HIHPDILRKPGRLTPDEWRLMQQHTIYGARILGDAPRLQMAREVALHHHEKWDGSGYPAG
EECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCC
LQGEAIYLAGRIVALADIYDALRNKRSYKPAFSHQEACRIITVGDGRVQPGHFDPAVLAT
CCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH
FQRIASHLEEIYETLKD
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PGYIGAIRNYACFYEGTLLVAAFNYPARVTAYERDVLQNLLTYSRFLQLVAGQIRDTEE
CCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AFHYTIQALARAAEANDDDTGNQIVRVGSFARELARGLGCLPNFCREIALAAQMHDVEKI
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEE
HIHPDILRKPGRLTPDEWRLMQQHTIYGARILGDAPRLQMAREVALHHHEKWDGSGYPAG
EECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCC
LQGEAIYLAGRIVALADIYDALRNKRSYKPAFSHQEACRIITVGDGRVQPGHFDPAVLAT
CCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH
FQRIASHLEEIYETLKD
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]