| Definition | Moorella thermoacetica ATCC 39073, complete genome. |
|---|---|
| Accession | NC_007644 |
| Length | 2,628,784 |
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The map label for this gene is amyB [H]
Identifier: 83590303
GI number: 83590303
Start: 1505494
End: 1508292
Strand: Reverse
Name: amyB [H]
Synonym: Moth_1459
Alternate gene names: 83590303
Gene position: 1508292-1505494 (Counterclockwise)
Preceding gene: 83590304
Following gene: 83590302
Centisome position: 57.38
GC content: 55.84
Gene sequence:
>2799_bases ATGTTCTTAAATGGTATGAAGAGGCGATTCCTGTCCTTGACGGTAATGATAAGCCTGCTCCTCGGCCTCCTTACGACATT TATAGGCCCCGTCTGGGTGGAGGCAGGTACCGTAGATTATAATGGTCTGGCTGCTAAAGCCATTCAATTTAATCAACAAG CTTTCTATAACGGCGAAAGGTTAAGCGCCTACGACGCCTACGTCCTCACCCTCGCCGGTGAAGACCTGGCAGCCTCAGAC TGGGTTTACAATGGTAAATCCTTACAGCAATCGATACTTGACGCCGTTTATGCAACTATTGAGAGTCCCGCTACTGCGAA GACAAAAGATATTGCCTATGAGCTCCTGGCGGTCAAGGCGTGGGGATATAGTGATCTGGCCAGGAAGTTGGCGGCCATTT TGGCCGATAAGCAGGGCCCAAACGGCTTCGACAATAATGTTTACAGCGATATGCCGGTTTTTGATGCCCTGGGCCGGGCC GGAGAATTCAGTGTGGTCAATGTTATTTACGCGCGTGAATATCTCCTTAACACCCAATGTACTACGGCGGGTGAAAATTA TGGCGCGTGGGGCAGTACGTGGGGCACGGATTTCTACCCGGACTTTATGACCACCTGCCAGGCCATCCGGGCATTGACCT ATCTGCCCAATGCCGCCGGTGACCAGCAGATCCAGGCCGCCATCACTAACGGCCTGGCCTACCTCCGGAAGTGGCAGCAA CCTGATGGAAGTGTCTATACTACACAGCCGTGGCCTGACGACCCTGCAGTCGACACCGCCGAGCTGATTGTCACTCTGCA AAGATTAGATGTGGATCCAGCCACCTGGAAAAGCGCCCAGGGGATGACGCCCGTTGACTATATGGTGCAGCTAGCCCCCA ATAGCGACGGGAGTTTCGGCACTACGAAGAACGCCCTTGATGCCACGGAATCCCTTTATGCTTATTTAATTCTGGAAGGA AGGGCCGGTTCTGTAGCTTCTCCGGGGCTGGCCATAACCCCGGCAACAGCCACCGTGAACGTCAATGGCCAACGGCAGTT TAAGGCCATAATGAATTATTTGAACGGCACGAGCAGCGACGTGACCCGGGATGCCGCCTGGTCGGTGGACAACGGCAACA TTGCTGAAGTTGTTAACGGCCTGGCAACCGGCCTTCAAACCGGGCAGACTGTAGTTAGGGCTACATATAACGGCCTGGCG GCGACGGCCAGTCTCACTGTAACAGAGTCCGCAACGTCATCTACAGGGGGGTCCGGCGGCTGTACCGTCGATATTGCCGT GGTAGGCCGGAACGGCGAGCTTCTCTACGGCCCCGGTGCGGTCACGGTGAGTAAAGACGGTAGGTGGGGCCTGACGGCCC TTGGCGCCCTGGAGGCCACCGGCCTCCCCTATGAAGAAGCCGGCGGCTTCGTTAAAAGCATAGCCGGGCAGGCCAACAGC GGCATGAACGGCTGGATGTATAAGGTAAACGGCAGCGTACCCATGGTGAGCGCTTCCCAGGAAATCGTCCGGGACGGCGA CCAGGTGATCTGGTGGTACAGTATGGACCTGAATTCCCCCGGCCCGACCTGGGACAGCTTGCTGAAAGGCAGTACGCCCG CCTCACCGGCAAATACGACACCGGCCGACCTGAAGGAGCAGAATAAAAAACTTCCCGCAGCCCTGCAAGCTCCCGATGCT GCCCTGGATGCCATGGGAAAAATCAACCAGTTGCTGGAATTGAAAGAAGATGCAGCGGAAATCGCGCCTTTAAGCGAAGT CAAAAAAGCCGTAGTAGTTACTGGTAGCGATAAAGCAATGAACCGGGCCGAAATACTCGCTCTGAAAAAAGATCTGCTCC AAAATAAAATTGACCTGGCCCAGGAGGTCTCGGCTTCGGCGGGAGCCATTATTTCTGACCCTAAAGCTGAAATAGCATTA TCTATTCCGGCCGGGGCCTTGACGAACGATGTAGAAATAACCGTCAAGAAAGGTGCCGGAGGTAATGCCGCCCCGGCTCC TCCGCCAGCAGGCTACCAGCAAATATCGGCAGTTTATAACTTTGGACCCGACGGCACTACTTTCGCCGTCCCGGTAACCT TATACCTGAAATTTGCCCTGCCGTCTCTTGTCAAACCGGAAAACCTGGCCCTGGCCTGGTACGATAAGACAAAAGTAAGT TGGGTAGCCATTCCGGCCGTGGTCGACGTATCTAAAGGCTTAATCCTGGCCCGGATAAACCACTTCTCCGACTATGCCGT ATTTGTTAAGGAGGCCAGGAAGGCCTTTCTGGATGTAACTCCAGCCAGCTTCGGCTGGGCCCAGGATACCATTGAAACCC TAGCCGGGGCCGGCATTGTGGCCGGGGTGGATGGCAGCCACTTTGAGCCGGGCCGGGCGGTGACCAGGGCGGAATTTGCC AGCCTCCTGGTCAAGGCTCTGGGCCTGGAAGGGAAGGCAGGGGAGAAGAACCCATTTAAAGACGTAAAAGGAGATGCCTG GTACGCCGGGGCAGTTACTGCCGCCGCCAGCAACGGCCTGGTCAAAGGGTATGAGGATGGCACCTTCCGCCCGGATAACG TTATTACCCGCGAGGAATTGGCCGCTATGCTGGTCCGGGCCGTGAATCTCCCTGCCGGCGAGGAAAAGCTGGCCTTTAAA GATAACGATAAAGTCTCTACCTGGGCCAGAAAGAGCGTGGCTGTAGCTGCCGCTCACGGGCTGGTTAAAGGCTTTGAAGA TGGCACCTTCCGGCCGGGGGATGCGGCCAGCCGGGCCGAATGCGCGGTGATGGTTTACAGGGTGTTAGTAGCTGAGTAA
Upstream 100 bases:
>100_bases TATTTTCATGACTGTTTTTGCCTTTCGGGCATGTGCGGTTAGTTTAGTGAACGAAAAACCTGGATTTAGTAGGTATTTTT GTATAATGGAGGGTCTGACC
Downstream 100 bases:
>100_bases AGGAGCGAGGATTGATTATAACGGCGGGGAGCGCCGGCGCGCACTGCGGTGCTCCTCACCGCTATTGTAGCTTCTTCCTG GCATTTAGGATAAATTTTGA
Product: Ig-like, group 2
Products: NA
Alternate protein names: Alpha-amylase/pullulanase; Pullulanase type II; Alpha-amylase; 1,4-alpha-D-glucan glucanohydrolase; Pullulanase; 1,4-alpha-D-glucan glucanohydrolase; Alpha-dextrin endo-1,6-alpha-glucosidase [H]
Number of amino acids: Translated: 932; Mature: 932
Protein sequence:
>932_residues MFLNGMKRRFLSLTVMISLLLGLLTTFIGPVWVEAGTVDYNGLAAKAIQFNQQAFYNGERLSAYDAYVLTLAGEDLAASD WVYNGKSLQQSILDAVYATIESPATAKTKDIAYELLAVKAWGYSDLARKLAAILADKQGPNGFDNNVYSDMPVFDALGRA GEFSVVNVIYAREYLLNTQCTTAGENYGAWGSTWGTDFYPDFMTTCQAIRALTYLPNAAGDQQIQAAITNGLAYLRKWQQ PDGSVYTTQPWPDDPAVDTAELIVTLQRLDVDPATWKSAQGMTPVDYMVQLAPNSDGSFGTTKNALDATESLYAYLILEG RAGSVASPGLAITPATATVNVNGQRQFKAIMNYLNGTSSDVTRDAAWSVDNGNIAEVVNGLATGLQTGQTVVRATYNGLA ATASLTVTESATSSTGGSGGCTVDIAVVGRNGELLYGPGAVTVSKDGRWGLTALGALEATGLPYEEAGGFVKSIAGQANS GMNGWMYKVNGSVPMVSASQEIVRDGDQVIWWYSMDLNSPGPTWDSLLKGSTPASPANTTPADLKEQNKKLPAALQAPDA ALDAMGKINQLLELKEDAAEIAPLSEVKKAVVVTGSDKAMNRAEILALKKDLLQNKIDLAQEVSASAGAIISDPKAEIAL SIPAGALTNDVEITVKKGAGGNAAPAPPPAGYQQISAVYNFGPDGTTFAVPVTLYLKFALPSLVKPENLALAWYDKTKVS WVAIPAVVDVSKGLILARINHFSDYAVFVKEARKAFLDVTPASFGWAQDTIETLAGAGIVAGVDGSHFEPGRAVTRAEFA SLLVKALGLEGKAGEKNPFKDVKGDAWYAGAVTAAASNGLVKGYEDGTFRPDNVITREELAAMLVRAVNLPAGEEKLAFK DNDKVSTWARKSVAVAAAHGLVKGFEDGTFRPGDAASRAECAVMVYRVLVAE
Sequences:
>Translated_932_residues MFLNGMKRRFLSLTVMISLLLGLLTTFIGPVWVEAGTVDYNGLAAKAIQFNQQAFYNGERLSAYDAYVLTLAGEDLAASD WVYNGKSLQQSILDAVYATIESPATAKTKDIAYELLAVKAWGYSDLARKLAAILADKQGPNGFDNNVYSDMPVFDALGRA GEFSVVNVIYAREYLLNTQCTTAGENYGAWGSTWGTDFYPDFMTTCQAIRALTYLPNAAGDQQIQAAITNGLAYLRKWQQ PDGSVYTTQPWPDDPAVDTAELIVTLQRLDVDPATWKSAQGMTPVDYMVQLAPNSDGSFGTTKNALDATESLYAYLILEG RAGSVASPGLAITPATATVNVNGQRQFKAIMNYLNGTSSDVTRDAAWSVDNGNIAEVVNGLATGLQTGQTVVRATYNGLA ATASLTVTESATSSTGGSGGCTVDIAVVGRNGELLYGPGAVTVSKDGRWGLTALGALEATGLPYEEAGGFVKSIAGQANS GMNGWMYKVNGSVPMVSASQEIVRDGDQVIWWYSMDLNSPGPTWDSLLKGSTPASPANTTPADLKEQNKKLPAALQAPDA ALDAMGKINQLLELKEDAAEIAPLSEVKKAVVVTGSDKAMNRAEILALKKDLLQNKIDLAQEVSASAGAIISDPKAEIAL SIPAGALTNDVEITVKKGAGGNAAPAPPPAGYQQISAVYNFGPDGTTFAVPVTLYLKFALPSLVKPENLALAWYDKTKVS WVAIPAVVDVSKGLILARINHFSDYAVFVKEARKAFLDVTPASFGWAQDTIETLAGAGIVAGVDGSHFEPGRAVTRAEFA SLLVKALGLEGKAGEKNPFKDVKGDAWYAGAVTAAASNGLVKGYEDGTFRPDNVITREELAAMLVRAVNLPAGEEKLAFK DNDKVSTWARKSVAVAAAHGLVKGFEDGTFRPGDAASRAECAVMVYRVLVAE >Mature_932_residues MFLNGMKRRFLSLTVMISLLLGLLTTFIGPVWVEAGTVDYNGLAAKAIQFNQQAFYNGERLSAYDAYVLTLAGEDLAASD WVYNGKSLQQSILDAVYATIESPATAKTKDIAYELLAVKAWGYSDLARKLAAILADKQGPNGFDNNVYSDMPVFDALGRA GEFSVVNVIYAREYLLNTQCTTAGENYGAWGSTWGTDFYPDFMTTCQAIRALTYLPNAAGDQQIQAAITNGLAYLRKWQQ PDGSVYTTQPWPDDPAVDTAELIVTLQRLDVDPATWKSAQGMTPVDYMVQLAPNSDGSFGTTKNALDATESLYAYLILEG RAGSVASPGLAITPATATVNVNGQRQFKAIMNYLNGTSSDVTRDAAWSVDNGNIAEVVNGLATGLQTGQTVVRATYNGLA ATASLTVTESATSSTGGSGGCTVDIAVVGRNGELLYGPGAVTVSKDGRWGLTALGALEATGLPYEEAGGFVKSIAGQANS GMNGWMYKVNGSVPMVSASQEIVRDGDQVIWWYSMDLNSPGPTWDSLLKGSTPASPANTTPADLKEQNKKLPAALQAPDA ALDAMGKINQLLELKEDAAEIAPLSEVKKAVVVTGSDKAMNRAEILALKKDLLQNKIDLAQEVSASAGAIISDPKAEIAL SIPAGALTNDVEITVKKGAGGNAAPAPPPAGYQQISAVYNFGPDGTTFAVPVTLYLKFALPSLVKPENLALAWYDKTKVS WVAIPAVVDVSKGLILARINHFSDYAVFVKEARKAFLDVTPASFGWAQDTIETLAGAGIVAGVDGSHFEPGRAVTRAEFA SLLVKALGLEGKAGEKNPFKDVKGDAWYAGAVTAAASNGLVKGYEDGTFRPDNVITREELAAMLVRAVNLPAGEEKLAFK DNDKVSTWARKSVAVAAAHGLVKGFEDGTFRPGDAASRAECAVMVYRVLVAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall. Note=It C-terminus may serve as an S-layer anchor [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 SLH (S-layer homology) domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006048 - InterPro: IPR013784 - InterPro: IPR008957 - InterPro: IPR003961 - InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR004185 - InterPro: IPR006589 - InterPro: IPR002044 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 - InterPro: IPR014756 - InterPro: IPR001119 [H]
Pfam domain/function: PF00128 Alpha-amylase; PF02903 Alpha-amylase_N; PF00395 SLH [H]
EC number: =3.2.1.1; =3.2.1.41 [H]
Molecular weight: Translated: 98572; Mature: 98572
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLNGMKRRFLSLTVMISLLLGLLTTFIGPVWVEAGTVDYNGLAAKAIQFNQQAFYNGER CCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCCCCCCCEEHHEEECHHHHCCCCE LSAYDAYVLTLAGEDLAASDWVYNGKSLQQSILDAVYATIESPATAKTKDIAYELLAVKA EEEEEEEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEHEEEE WGYSDLARKLAAILADKQGPNGFDNNVYSDMPVFDALGRAGEFSVVNVIYAREYLLNTQC CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCC TTAGENYGAWGSTWGTDFYPDFMTTCQAIRALTYLPNAAGDQQIQAAITNGLAYLRKWQQ CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC PDGSVYTTQPWPDDPAVDTAELIVTLQRLDVDPATWKSAQGMTPVDYMVQLAPNSDGSFG CCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCC TTKNALDATESLYAYLILEGRAGSVASPGLAITPATATVNVNGQRQFKAIMNYLNGTSSD CCCHHHHHHHCEEEEEEEECCCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHHCCCCCC VTRDAAWSVDNGNIAEVVNGLATGLQTGQTVVRATYNGLAATASLTVTESATSSTGGSGG CCCCCCEECCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEEECCCCCCCCCCCC CTVDIAVVGRNGELLYGPGAVTVSKDGRWGLTALGALEATGLPYEEAGGFVKSIAGQANS CEEEEEEEECCCCEEECCCEEEECCCCCCCHHHHHHHHHCCCCHHHHCCHHHHHHCCCCC GMNGWMYKVNGSVPMVSASQEIVRDGDQVIWWYSMDLNSPGPTWDSLLKGSTPASPANTT CCCCEEEEECCCCCEEECCHHHHCCCCEEEEEEEEECCCCCCCHHHHHCCCCCCCCCCCC PADLKEQNKKLPAALQAPDAALDAMGKINQLLELKEDAAEIAPLSEVKKAVVVTGSDKAM CHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEEECCCHHH NRAEILALKKDLLQNKIDLAQEVSASAGAIISDPKAEIALSIPAGALTNDVEITVKKGAG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCCCEEEEEEECCC GNAAPAPPPAGYQQISAVYNFGPDGTTFAVPVTLYLKFALPSLVKPENLALAWYDKTKVS CCCCCCCCCCCHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEECCCCEE WVAIPAVVDVSKGLILARINHFSDYAVFVKEARKAFLDVTPASFGWAQDTIETLAGAGIV EEEECHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCEE AGVDGSHFEPGRAVTRAEFASLLVKALGLEGKAGEKNPFKDVKGDAWYAGAVTAAASNGL ECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECHHHHHCCCCC VKGYEDGTFRPDNVITREELAAMLVRAVNLPAGEEKLAFKDNDKVSTWARKSVAVAAAHG EECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHH LVKGFEDGTFRPGDAASRAECAVMVYRVLVAE HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MFLNGMKRRFLSLTVMISLLLGLLTTFIGPVWVEAGTVDYNGLAAKAIQFNQQAFYNGER CCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCCCCCCCEEHHEEECHHHHCCCCE LSAYDAYVLTLAGEDLAASDWVYNGKSLQQSILDAVYATIESPATAKTKDIAYELLAVKA EEEEEEEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEHEEEE WGYSDLARKLAAILADKQGPNGFDNNVYSDMPVFDALGRAGEFSVVNVIYAREYLLNTQC CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCC TTAGENYGAWGSTWGTDFYPDFMTTCQAIRALTYLPNAAGDQQIQAAITNGLAYLRKWQQ CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC PDGSVYTTQPWPDDPAVDTAELIVTLQRLDVDPATWKSAQGMTPVDYMVQLAPNSDGSFG CCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCC TTKNALDATESLYAYLILEGRAGSVASPGLAITPATATVNVNGQRQFKAIMNYLNGTSSD CCCHHHHHHHCEEEEEEEECCCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHHCCCCCC VTRDAAWSVDNGNIAEVVNGLATGLQTGQTVVRATYNGLAATASLTVTESATSSTGGSGG CCCCCCEECCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEEECCCCCCCCCCCC CTVDIAVVGRNGELLYGPGAVTVSKDGRWGLTALGALEATGLPYEEAGGFVKSIAGQANS CEEEEEEEECCCCEEECCCEEEECCCCCCCHHHHHHHHHCCCCHHHHCCHHHHHHCCCCC GMNGWMYKVNGSVPMVSASQEIVRDGDQVIWWYSMDLNSPGPTWDSLLKGSTPASPANTT CCCCEEEEECCCCCEEECCHHHHCCCCEEEEEEEEECCCCCCCHHHHHCCCCCCCCCCCC PADLKEQNKKLPAALQAPDAALDAMGKINQLLELKEDAAEIAPLSEVKKAVVVTGSDKAM CHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEEECCCHHH NRAEILALKKDLLQNKIDLAQEVSASAGAIISDPKAEIALSIPAGALTNDVEITVKKGAG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCCCEEEEEEECCC GNAAPAPPPAGYQQISAVYNFGPDGTTFAVPVTLYLKFALPSLVKPENLALAWYDKTKVS CCCCCCCCCCCHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEECCCCEE WVAIPAVVDVSKGLILARINHFSDYAVFVKEARKAFLDVTPASFGWAQDTIETLAGAGIV EEEECHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCEE AGVDGSHFEPGRAVTRAEFASLLVKALGLEGKAGEKNPFKDVKGDAWYAGAVTAAASNGL ECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECHHHHHCCCCC VKGYEDGTFRPDNVITREELAAMLVRAVNLPAGEEKLAFKDNDKVSTWARKSVAVAAAHG EECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHH LVKGFEDGTFRPGDAASRAECAVMVYRVLVAE HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8195085 [H]