Click here to switch to the map view.

The map label for this gene is comGC [H]

Identifier: 82751146

GI number: 82751146

Start: 1534011

End: 1534322

Strand: Reverse

Name: comGC [H]

Synonym: SAB1414c

Alternate gene names: 82751146

Gene position: 1534322-1534011 (Counterclockwise)

Preceding gene: 82751147

Following gene: 82751145

Centisome position: 55.95

GC content: 29.17

Gene sequence:

>312_bases
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Upstream 100 bases:

>100_bases
TTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACCAATGTTTCAAATGATGCAAAGTAT
AAAATAATGGAGGTTAATAT

Downstream 100 bases:

>100_bases
AAAGCAGTCAGCATTTACTATGATTGAGATGCTTGTGGTAATGATGTTAATCAGTATATTTTTACTTTTGACAATGACAT
CTAAAGGATTAAGCAATCTT

Product: exogenous DNA-binding protein

Products: NA

Alternate protein names: Late competence protein ComGC [H]

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Sequences:

>Translated_103_residues
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN
>Mature_103_residues
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Specific function: Required for transformation and DNA binding [H]

COG id: COG4537

COG function: function code U; Competence protein ComGC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein. Cell surface. Note=The unprocessed form is an integral membrane protein with its C-terminus outside the membrane. Upon cleavage, it is translocated to the outer face of the membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComGC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000983
- InterPro:   IPR016940
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 11316; Mature: 11316

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ALKHNRNPSSIEDLIADGFIKEAQKTCKSGETITISNGEAVAN
HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
>Mature Secondary Structure
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ALKHNRNPSSIEDLIADGFIKEAQKTCKSGETITISNGEAVAN
HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12007649 [H]