Click here to switch to the map view.

The map label for this gene is yqjE [H]

Identifier: 82751117

GI number: 82751117

Start: 1507218

End: 1508465

Strand: Reverse

Name: yqjE [H]

Synonym: SAB1385c

Alternate gene names: 82751117

Gene position: 1508465-1507218 (Counterclockwise)

Preceding gene: 82751118

Following gene: 82751116

Centisome position: 55.0

GC content: 35.9

Gene sequence:

>1248_bases
ATGACACAATTTACAAGCCTGATAAATCTGTGTAACGTCAATTACTGTAACATTTTATTTCATCAATTTTTACCGTTTGG
CGTACTTGAAAATTTTGATAAAAGGGGTTCCATTATGATTAATGAGCAAAGATTACTTAATACGTTTTTAGAACTTGTAC
AAATCGATTCTGAGACAGGGAATGAATCAACAATCCAACCTATTTTAAAAGAAAAATTCATAGCATTAGGGTTAGATGTT
AAAGAAGATGAAGCGGCTAAACATCCTAAATTAGGTGCCAATAATCTAGTGTGTACAATGAATAGTACTATCGAAGAAGG
CGAAGTACCTAAATTATATTTGACGAGCCATATGGATACTGTTGTACCCGCAATTAATGTAAAGCCAATTGTAAAAGATG
ACGGCTACATATACTCTGACGGTACGACTATTCTAGGTGCAGATGATAAAGCGGGATTAGCAGCTATGCTTGAAGTTTTG
CAAGTGATAAAGGAACAACAAATCCCACATGGACAAATTCAATTTGTGATTACTGTTGGAGAAGAATCAGGTTTAATTGG
TGCTAAAGAATTAAATTCAGAGTTGTTGGATGCGGACTTTGGTTATGCTATTGATGCAAGTGCTGATGTCGGTACTACGG
TTGTAGGTGCACCGACGCAAATGTTAATTTCAGCTAAAATTATTGGCAAAACGGCTCATGCAAGTACGCCAAAAGAGGGT
GTTAGTGCTATTAATATTGCGGCGAAAGCAATTAGTCGAATGAAATTAGGACAAGTTGATGAAATCACTACTGCCAATAT
TGGTAAGTTTCATGGCGGTTCAGCTACGAATATTGTTGCAGATGAAGTCATCTTAGAAGCAGAGGCACGTTCTCACGATC
CAGAAAGAATAAAAACACAAGTCAAACATATGACTGATGTGTTTGAAACAACTGCATCAGAATTAGGTGGGAAAGCAGTA
GTTACAGTGGAGCAAAGTTATCCAGGATTTAAAATTAATGATAATGAAACGGTTGTTAAAATTGCACAAGAAAGTGCTCG
TAATTTAGGATTATCTGCAAATACAATTATTTCTGGTGGCGGTTCAGACGGCAGTATTATTAATACATTTGGTATTCCTT
CAGTCATTTTAGGAGTGGGTTATGAAAAAATCCATACAACAAATGAGAGAATGCCGATTAAATCATTGAACTTGCTTGCA
AGTCAAGTGTTAGAAATAATCAAAATAGTTGCGCGACAATCGAAATGA

Upstream 100 bases:

>100_bases
ATTTTCCTCATTATACGATATCTTTGAAAAATCAATCAATATATTTTTGACAAAGCTTAGTTTGAGTTACAATAAATATA
TATATTAAATTGAAAATAAT

Downstream 100 bases:

>100_bases
TTTAGTGTAGTGTATGTCTATTTTGTGATACAATACTAATGAAAAATCAACAAGTGAGGTAAGTAATATGACACAACAAA
TTGGAGTTATTGGTTTAGCC

Product: peptidase T

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MTQFTSLINLCNVNYCNILFHQFLPFGVLENFDKRGSIMINEQRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDV
KEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVL
QVIKEQQIPHGQIQFVITVGEESGLIGAKELNSELLDADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTAHASTPKEG
VSAINIAAKAISRMKLGQVDEITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAV
VTVEQSYPGFKINDNETVVKIAQESARNLGLSANTIISGGGSDGSIINTFGIPSVILGVGYEKIHTTNERMPIKSLNLLA
SQVLEIIKIVARQSK

Sequences:

>Translated_415_residues
MTQFTSLINLCNVNYCNILFHQFLPFGVLENFDKRGSIMINEQRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDV
KEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVL
QVIKEQQIPHGQIQFVITVGEESGLIGAKELNSELLDADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTAHASTPKEG
VSAINIAAKAISRMKLGQVDEITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAV
VTVEQSYPGFKINDNETVVKIAQESARNLGLSANTIISGGGSDGSIINTFGIPSVILGVGYEKIHTTNERMPIKSLNLLA
SQVLEIIKIVARQSK
>Mature_414_residues
TQFTSLINLCNVNYCNILFHQFLPFGVLENFDKRGSIMINEQRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVK
EDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQ
VIKEQQIPHGQIQFVITVGEESGLIGAKELNSELLDADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTAHASTPKEGV
SAINIAAKAISRMKLGQVDEITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAVV
TVEQSYPGFKINDNETVVKIAQESARNLGLSANTIISGGGSDGSIINTFGIPSVILGVGYEKIHTTNERMPIKSLNLLAS
QVLEIIKIVARQSK

Specific function: Could be a peptidase [H]

COG id: COG2195

COG function: function code E; Di- and tripeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Escherichia coli, GI1787372, Length=417, Percent_Identity=23.5011990407674, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010162
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.4.11.4 [C]

Molecular weight: Translated: 44618; Mature: 44486

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00758 ARGE_DAPE_CPG2_1 ; PS00759 ARGE_DAPE_CPG2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQFTSLINLCNVNYCNILFHQFLPFGVLENFDKRGSIMINEQRLLNTFLELVQIDSETG
CCHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCCC
NESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDT
CCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCHHH
VVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQIPHGQIQFVITVG
HCCCCCCEEEEECCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEC
EESGLIGAKELNSELLDADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTAHASTPKEG
CCCCCEEHHHHHHHHHCCCCCEEEECCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCHHH
VSAINIAAKAISRMKLGQVDEITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQ
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEECHHCCCCHHHHHHH
VKHMTDVFETTASELGGKAVVTVEQSYPGFKINDNETVVKIAQESARNLGLSANTIISGG
HHHHHHHHHHHHHHHCCEEEEEEECCCCCEEECCCCCEEHHHHHHHHHCCCCCCEEEECC
GSDGSIINTFGIPSVILGVGYEKIHTTNERMPIKSLNLLASQVLEIIKIVARQSK
CCCCCEEECCCCHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQFTSLINLCNVNYCNILFHQFLPFGVLENFDKRGSIMINEQRLLNTFLELVQIDSETG
CHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCCC
NESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDT
CCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCHHH
VVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQIPHGQIQFVITVG
HCCCCCCEEEEECCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEC
EESGLIGAKELNSELLDADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTAHASTPKEG
CCCCCEEHHHHHHHHHCCCCCEEEECCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCHHH
VSAINIAAKAISRMKLGQVDEITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQ
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEECHHCCCCHHHHHHH
VKHMTDVFETTASELGGKAVVTVEQSYPGFKINDNETVVKIAQESARNLGLSANTIISGG
HHHHHHHHHHHHHHHCCEEEEEEECCCCCEEECCCCCEEHHHHHHHHHCCCCCCEEEECC
GSDGSIINTFGIPSVILGVGYEKIHTTNERMPIKSLNLLASQVLEIIKIVARQSK
CCCCCEEECCCCHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Aminopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]