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The map label for this gene is yhdZ [C]

Identifier: 82751112

GI number: 82751112

Start: 1504039

End: 1504890

Strand: Reverse

Name: yhdZ [C]

Synonym: SAB1380c

Alternate gene names: 82751112

Gene position: 1504890-1504039 (Counterclockwise)

Preceding gene: 82751113

Following gene: 82751111

Centisome position: 54.87

GC content: 24.53

Gene sequence:

>852_bases
ATGACTATTAAGAATTTAAAAGTTGATATTAATAATAGAAAAATTCTAAACCTTAATAATAGTACTATAAATATTTATAG
TAAAGATAAAATAGCACTTATAGGGAAAAATGACGCGGGAAAAACGACTTTGATTAATTGCTTGTTAAATGAGATAAAAT
ATAGTGGCGTTATTAACAGAAAGATAAAGTCTAAAGATATAGGAATTGTTTTTCAAGAGAATAAGTATGGGGATTTAATC
AAAGTACATGAATTAATTTATTTAATAACAGCTTATAGCAAAAGAAGTAAACAATTTAAAGCATTTACGAAAGCTTTCTC
ATTAGAACATCTTATAAATAAATTTGTTAAAGATTTATCCTTGGGGGAGCAAAAGCGCTTAACTGTAGGATTAGTATTAA
ATGAACAAAAAAAGTTATACATATTTGATGAATTGACATCTGGATTAGACTATGAAAAAAGACAAAATTTATTACAGAAA
ACTAAAGAAATCACCCAAAATAAAGCAGTAATTAAAATTACGCATTACTTTGGTGAGGTTGAAAATTGGGCGAATAAATT
AATTATTATAGATAAAGGAGAATTATTGTATTACGGCAGTATAGATCAATTTTTCTCAAAATTTTATCACTACGCACTTA
TTGAAATAGAGAATCAAGAATTAGATTATCAAGTTAGAGTTGTTATTGAAAAAATAAATGCCGATGTATATTTTAATACT
AAGATTGTTACCCATAATAAAGAGCAAATGAATGACGTTATTAATATATTAAATGAACGAAAAATAGAATTTAAAATAAA
CATGCAAAATATATACTCAACATATTTAATATCAACTTTGGAGGAAATATGA

Upstream 100 bases:

>100_bases
GTACAAGTGCATCAACAGCAGAGCAATAAATTAAAGGTAAAGCTTGGTCTATTTAGATCAAGCTTTTCCAAATTTGATAG
GTGAGTGTATGGAAAGTTTA

Downstream 100 bases:

>100_bases
TAAATAAAATTTTGTTAAGCATAAAAATGCAATTTAGAGTTCCTATATCGGTGTTCTTTTCATTAATTTTTCCAATCATC
ATGATAATAGTTATAATTTT

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MTIKNLKVDINNRKILNLNNSTINIYSKDKIALIGKNDAGKTTLINCLLNEIKYSGVINRKIKSKDIGIVFQENKYGDLI
KVHELIYLITAYSKRSKQFKAFTKAFSLEHLINKFVKDLSLGEQKRLTVGLVLNEQKKLYIFDELTSGLDYEKRQNLLQK
TKEITQNKAVIKITHYFGEVENWANKLIIIDKGELLYYGSIDQFFSKFYHYALIEIENQELDYQVRVVIEKINADVYFNT
KIVTHNKEQMNDVINILNERKIEFKINMQNIYSTYLISTLEEI

Sequences:

>Translated_283_residues
MTIKNLKVDINNRKILNLNNSTINIYSKDKIALIGKNDAGKTTLINCLLNEIKYSGVINRKIKSKDIGIVFQENKYGDLI
KVHELIYLITAYSKRSKQFKAFTKAFSLEHLINKFVKDLSLGEQKRLTVGLVLNEQKKLYIFDELTSGLDYEKRQNLLQK
TKEITQNKAVIKITHYFGEVENWANKLIIIDKGELLYYGSIDQFFSKFYHYALIEIENQELDYQVRVVIEKINADVYFNT
KIVTHNKEQMNDVINILNERKIEFKINMQNIYSTYLISTLEEI
>Mature_282_residues
TIKNLKVDINNRKILNLNNSTINIYSKDKIALIGKNDAGKTTLINCLLNEIKYSGVINRKIKSKDIGIVFQENKYGDLIK
VHELIYLITAYSKRSKQFKAFTKAFSLEHLINKFVKDLSLGEQKRLTVGLVLNEQKKLYIFDELTSGLDYEKRQNLLQKT
KEITQNKAVIKITHYFGEVENWANKLIIIDKGELLYYGSIDQFFSKFYHYALIEIENQELDYQVRVVIEKINADVYFNTK
IVTHNKEQMNDVINILNERKIEFKINMQNIYSTYLISTLEEI

Specific function: Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system [H]

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI27881501, Length=214, Percent_Identity=28.5046728971963, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI30795238, Length=214, Percent_Identity=28.5046728971963, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI116734710, Length=231, Percent_Identity=26.8398268398268, Blast_Score=69, Evalue=3e-12,
Organism=Escherichia coli, GI1789672, Length=209, Percent_Identity=24.8803827751196, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787029, Length=202, Percent_Identity=25.2475247524752, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1786319, Length=274, Percent_Identity=26.6423357664234, Blast_Score=65, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6324585, Length=251, Percent_Identity=25.0996015936255, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322177, Length=252, Percent_Identity=26.1904761904762, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116007328, Length=206, Percent_Identity=29.126213592233, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28574150, Length=206, Percent_Identity=29.126213592233, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 33154; Mature: 33023

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKNLKVDINNRKILNLNNSTINIYSKDKIALIGKNDAGKTTLINCLLNEIKYSGVINR
CCCEEEEEEECCEEEEEECCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC
KIKSKDIGIVFQENKYGDLIKVHELIYLITAYSKRSKQFKAFTKAFSLEHLINKFVKDLS
EECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LGEQKRLTVGLVLNEQKKLYIFDELTSGLDYEKRQNLLQKTKEITQNKAVIKITHYFGEV
CCCCCCEEEEEEEECCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEEHHHHH
ENWANKLIIIDKGELLYYGSIDQFFSKFYHYALIEIENQELDYQVRVVIEKINADVYFNT
HHHCCEEEEEECCCEEEECCHHHHHHHHHEEEEEEEECCCCCEEEEEEEEECCCCEEEEE
KIVTHNKEQMNDVINILNERKIEFKINMQNIYSTYLISTLEEI
EEEECCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TIKNLKVDINNRKILNLNNSTINIYSKDKIALIGKNDAGKTTLINCLLNEIKYSGVINR
CCEEEEEEECCEEEEEECCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC
KIKSKDIGIVFQENKYGDLIKVHELIYLITAYSKRSKQFKAFTKAFSLEHLINKFVKDLS
EECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LGEQKRLTVGLVLNEQKKLYIFDELTSGLDYEKRQNLLQKTKEITQNKAVIKITHYFGEV
CCCCCCEEEEEEEECCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEEHHHHH
ENWANKLIIIDKGELLYYGSIDQFFSKFYHYALIEIENQELDYQVRVVIEKINADVYFNT
HHHCCEEEEEECCCEEEECCHHHHHHHHHEEEEEEEECCCCCEEEEEEEEECCCCEEEEE
KIVTHNKEQMNDVINILNERKIEFKINMQNIYSTYLISTLEEI
EEEECCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA