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The map label for this gene is sstD

Identifier: 82750440

GI number: 82750440

Start: 754893

End: 755894

Strand: Direct

Name: sstD

Synonym: SAB0688

Alternate gene names: 82750440

Gene position: 754893-755894 (Clockwise)

Preceding gene: 82750439

Following gene: 82750444

Centisome position: 27.53

GC content: 29.54

Gene sequence:

>1002_bases
ATGAAGAAAACAGTCTTATATTTAGTATTAGCAGTAATGTTTTTATTAGCGGCATGCGGTAACAATTCTGATAAAGAACA
ATCAAAATCAGAAACTAAAGGTTCAAAAGAAACGGTTAAAATTGAAAATAACTATAAAATGCGTGGCGAGAAAAAAGATG
GTAGTGACGCTAAAAAAGTTAAAGAAACTGTTGAAGTACCAAAGAATCCTAAAAATGCAGTTGTGTTAGACTATGGCGCA
TTAGATGTAATGAAAGAAATGGGCTTATCAGACAAAGTAAAAGCATTACCGAATTTCTTAGAATCATTTAAAGATGATAA
ATATACAAACATTGGTAATTTAAAAGAAGTGAATTTTGATAAAATTGCTGCGACGAAACCCGAAGTAATCTTTATCTCTG
GACGTACAGCTAATCAAAAGAATTTAGATGAATTCAAAAAAGCTGCACCTAAAGCGAAAATTGTTTATGTTGGTGCAGAT
GAAAAGAACTTAATTGGTTCAATGAAACAAAACACTGAAAATATCGGTAAAATCTACGACAAAGAAGTCAAAGCTAAAGA
GTTAAATAAAGATTTAGATAATAAAATTGCTTCAATGAAAGATAAAACGAAAAACTTCAATAAAACTGTTATGTATTTAC
TAGTTAACGAAGGTGAATTATCAACATTTGGACCTAAAGGTCGTTTTGGTGGATTAGTTTACGATACATTAGGATTCAAT
GCAGTTGATAAAAAAGTAAGTAATAGTAATCATGGACAAAATGTTTCTAACGAATATGTAAATAAAGAAAATCCAGATGT
TATTTTAGCGATGGATAGAGGTCAAGCGGTAAGTGGTAAATCAACTGCGAAACAAGCATTAAATAATCCTGTATTAAAAA
ATGTTAAAGCAATTAAAGAAGACAAAGTTTATAATTTAGATCCTAAATTATGGTACTTTGCAGCTGGATCAACTACAACT
ACAATTAAACAAATTGAGGAACTTGATAAAGTTGTAAAATAA

Upstream 100 bases:

>100_bases
AAGGGGTGATGCGCCAATTAAAGAAGGGTTAAACGTAAAGCATTTATTTATATTTCACATCAAGCACACAGATTAAGCCA
AAAGAGGAGAATAATATATT

Downstream 100 bases:

>100_bases
TTTTAAAAGAGGGAAACAATGGTTAAAGGTCTTAATCATTGTTTCCCTCTTTACTTTAAAAAAGGAAATCTGGGACGTTA
ATCAATGTCCTAGACTCTAA

Product: ferrichrome ABC transporter lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MKKTVLYLVLAVMFLLAACGNNSDKEQSKSETKGSKETVKIENNYKMRGEKKDGSDAKKVKETVEVPKNPKNAVVLDYGA
LDVMKEMGLSDKVKALPNFLESFKDDKYTNIGNLKEVNFDKIAATKPEVIFISGRTANQKNLDEFKKAAPKAKIVYVGAD
EKNLIGSMKQNTENIGKIYDKEVKAKELNKDLDNKIASMKDKTKNFNKTVMYLLVNEGELSTFGPKGRFGGLVYDTLGFN
AVDKKVSNSNHGQNVSNEYVNKENPDVILAMDRGQAVSGKSTAKQALNNPVLKNVKAIKEDKVYNLDPKLWYFAAGSTTT
TIKQIEELDKVVK

Sequences:

>Translated_333_residues
MKKTVLYLVLAVMFLLAACGNNSDKEQSKSETKGSKETVKIENNYKMRGEKKDGSDAKKVKETVEVPKNPKNAVVLDYGA
LDVMKEMGLSDKVKALPNFLESFKDDKYTNIGNLKEVNFDKIAATKPEVIFISGRTANQKNLDEFKKAAPKAKIVYVGAD
EKNLIGSMKQNTENIGKIYDKEVKAKELNKDLDNKIASMKDKTKNFNKTVMYLLVNEGELSTFGPKGRFGGLVYDTLGFN
AVDKKVSNSNHGQNVSNEYVNKENPDVILAMDRGQAVSGKSTAKQALNNPVLKNVKAIKEDKVYNLDPKLWYFAAGSTTT
TIKQIEELDKVVK
>Mature_333_residues
MKKTVLYLVLAVMFLLAACGNNSDKEQSKSETKGSKETVKIENNYKMRGEKKDGSDAKKVKETVEVPKNPKNAVVLDYGA
LDVMKEMGLSDKVKALPNFLESFKDDKYTNIGNLKEVNFDKIAATKPEVIFISGRTANQKNLDEFKKAAPKAKIVYVGAD
EKNLIGSMKQNTENIGKIYDKEVKAKELNKDLDNKIASMKDKTKNFNKTVMYLLVNEGELSTFGPKGRFGGLVYDTLGFN
AVDKKVSNSNHGQNVSNEYVNKENPDVILAMDRGQAVSGKSTAKQALNNPVLKNVKAIKEDKVYNLDPKLWYFAAGSTTT
TIKQIEELDKVVK

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4607

COG function: function code P; ABC-type enterochelin transport system, periplasmic component

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 36999; Mature: 36999

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTVLYLVLAVMFLLAACGNNSDKEQSKSETKGSKETVKIENNYKMRGEKKDGSDAKKV
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCEEECCCCCCCCHHHHH
KETVEVPKNPKNAVVLDYGALDVMKEMGLSDKVKALPNFLESFKDDKYTNIGNLKEVNFD
HHHHHCCCCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
KIAATKPEVIFISGRTANQKNLDEFKKAAPKAKIVYVGADEKNLIGSMKQNTENIGKIYD
HHHCCCCCEEEEECCCCCCCCHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH
KEVKAKELNKDLDNKIASMKDKTKNFNKTVMYLLVNEGELSTFGPKGRFGGLVYDTLGFN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEHHCCCC
AVDKKVSNSNHGQNVSNEYVNKENPDVILAMDRGQAVSGKSTAKQALNNPVLKNVKAIKE
HHHHHHCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHH
DKVYNLDPKLWYFAAGSTTTTIKQIEELDKVVK
CCEEECCCCEEEEECCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKTVLYLVLAVMFLLAACGNNSDKEQSKSETKGSKETVKIENNYKMRGEKKDGSDAKKV
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCEEECCCCCCCCHHHHH
KETVEVPKNPKNAVVLDYGALDVMKEMGLSDKVKALPNFLESFKDDKYTNIGNLKEVNFD
HHHHHCCCCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
KIAATKPEVIFISGRTANQKNLDEFKKAAPKAKIVYVGADEKNLIGSMKQNTENIGKIYD
HHHCCCCCEEEEECCCCCCCCHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH
KEVKAKELNKDLDNKIASMKDKTKNFNKTVMYLLVNEGELSTFGPKGRFGGLVYDTLGFN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEHHCCCC
AVDKKVSNSNHGQNVSNEYVNKENPDVILAMDRGQAVSGKSTAKQALNNPVLKNVKAIKE
HHHHHHCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHH
DKVYNLDPKLWYFAAGSTTTTIKQIEELDKVVK
CCEEECCCCEEEEECCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 10658653 [H]