| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is 82750427
Identifier: 82750427
GI number: 82750427
Start: 741534
End: 742076
Strand: Direct
Name: 82750427
Synonym: SAB0674
Alternate gene names: NA
Gene position: 741534-742076 (Clockwise)
Preceding gene: 82750426
Following gene: 82750433
Centisome position: 27.04
GC content: 32.41
Gene sequence:
>543_bases ATGACCCGTAAATCAATCGCGATTGATATGGATGAAGTATTAGCAGATACATTAGGAGAAATCATTGATGCTGTCAATTT TAGAGCGGATTTAGGTATTAAAATGGAAGCTTTGAATGGTCAAAAACTTAAACATGTTATTCCTGAACATGATGGATTAA TTACAGAAGTATTGAGAGAACCAGGCTTCTTCAGACATCTTAAAGTGATGCCGCATGCACAAGAAGTTGTGAAAAAATTA ACTGAACATTATGATGTATATAGTGCTACAGCAGCAATGGATGTACCAACATCATTTAGTGATAAATATGAATGGTTACT AGAGTTCTTTCCATTTTTAGATCCTCAGCATTTTGTTTTTTGTGGTAGAAAAAACATCGTTAAAGCTGATTATTTAATAG ATGACAATCCTAGACAGCTTGAAATTTTTACTGGTACACCGATTATGTTTACAGCAGTGCATAATATTAATGATGATCGA TTTGAACGCGTAAATAGCTGGAAAGATGTAGAACAGTATTTTTTAGATAATATTGAGAAATAA
Upstream 100 bases:
>100_bases GAGTATTCAGTGTAAAAAGCAACAATAGATGATATTGTTTTGTATCAATTGCTTTTTTGCTATACTGAATCAATACTGAT ATTTTGAGGAGAAGATTAAA
Downstream 100 bases:
>100_bases AAATATATCACTTGAAGCATTTCATGTAGCAAATAAAATGCATATACTGGGGCCCCAACAAAGAAGCTGACGAAAAGTCA GCTTACAATAATGTGCGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTRKSIAIDMDEVLADTLGEIIDAVNFRADLGIKMEALNGQKLKHVIPEHDGLITEVLREPGFFRHLKVMPHAQEVVKKL TEHYDVYSATAAMDVPTSFSDKYEWLLEFFPFLDPQHFVFCGRKNIVKADYLIDDNPRQLEIFTGTPIMFTAVHNINDDR FERVNSWKDVEQYFLDNIEK
Sequences:
>Translated_180_residues MTRKSIAIDMDEVLADTLGEIIDAVNFRADLGIKMEALNGQKLKHVIPEHDGLITEVLREPGFFRHLKVMPHAQEVVKKL TEHYDVYSATAAMDVPTSFSDKYEWLLEFFPFLDPQHFVFCGRKNIVKADYLIDDNPRQLEIFTGTPIMFTAVHNINDDR FERVNSWKDVEQYFLDNIEK >Mature_179_residues TRKSIAIDMDEVLADTLGEIIDAVNFRADLGIKMEALNGQKLKHVIPEHDGLITEVLREPGFFRHLKVMPHAQEVVKKLT EHYDVYSATAAMDVPTSFSDKYEWLLEFFPFLDPQHFVFCGRKNIVKADYLIDDNPRQLEIFTGTPIMFTAVHNINDDRF ERVNSWKDVEQYFLDNIEK
Specific function: Dephosphorylates the 5' and 2'(3')-phosphates of deoxyribonucleotides (Potential) [H]
COG id: COG4502
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 5'(3')-deoxyribonucleotidase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010708 - InterPro: IPR023214 [H]
Pfam domain/function: PF06941 NT5C [H]
EC number: NA
Molecular weight: Translated: 20935; Mature: 20804
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKSIAIDMDEVLADTLGEIIDAVNFRADLGIKMEALNGQKLKHVIPEHDGLITEVLRE CCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHCCCCCCHHHHHHHC PGFFRHLKVMPHAQEVVKKLTEHYDVYSATAAMDVPTSFSDKYEWLLEFFPFLDPQHFVF CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEE CGRKNIVKADYLIDDNPRQLEIFTGTPIMFTAVHNINDDRFERVNSWKDVEQYFLDNIEK ECCCCCEEECEEECCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRKSIAIDMDEVLADTLGEIIDAVNFRADLGIKMEALNGQKLKHVIPEHDGLITEVLRE CCCCEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHCCCCCCHHHHHHHC PGFFRHLKVMPHAQEVVKKLTEHYDVYSATAAMDVPTSFSDKYEWLLEFFPFLDPQHFVF CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEE CGRKNIVKADYLIDDNPRQLEIFTGTPIMFTAVHNINDDRFERVNSWKDVEQYFLDNIEK ECCCCCEEECEEECCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA