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The map label for this gene is yfmR [H]

Identifier: 82750422

GI number: 82750422

Start: 733697

End: 735580

Strand: Direct

Name: yfmR [H]

Synonym: SAB0669

Alternate gene names: 82750422

Gene position: 733697-735580 (Clockwise)

Preceding gene: 82750421

Following gene: 82750423

Centisome position: 26.75

GC content: 33.01

Gene sequence:

>1884_bases
ATGGGTATGGAAGCATATAAAATTGAACATTTAAATAAATCTTATGCCGATAAGACTATATTCGATAACCTAGATTTATC
AATTTCAGAAGGTGAAAAAATAGGTTTGGTAGGCATAAATGGTACAGGGAAAAGTACGTTGCTAAAAGTAATTGGTGGTA
TTGATGATGATTTTACAGCCAATGTTATGCATCCAAATCAATATCGAATTCGATATTCGTCTCAGAAACAGGACCTTAAT
GAAGATATGACAGTTTTTGATGCAGTATTAAGTTCTGATACAACAACTTTACGTATCATCAAGCAATATGAGCAGGCAGT
ACAAGCTTATGCGGATGACCAAAGTGATAAATTGTTCAAGCGAATGATGGATGCGCAAGATGCTATGGATCAACATGATG
CTTGGGACTATAACGCTGAAATTAAAACAATTCTTTCAAAACTAGGTATACATGATACTACTAAATACATTAAAGAATTA
TCCGGCGGACAACAAAAACGTGTTGTACTTGCTAAAACATTAATAGAAAAACCAGATTTATTGTTATTAGATGAACCTAC
GAACCATTTAGACTTCGAATCAATCAGCTGGTTGATCAATTATGTGAAGCAATATCCTCATACAGTTTTATTCGTAACCC
ATGATCGATATTTTTTAAATGAAGTTTCCACTAGAATTATTGAACTAAACAGAGGTAAGTTAGCGTCATATCCTGGTAAC
TATGAATCTTATATTGAAATGCGCGCTGAAAGAGAAGTAACACTTCAAAAGCAACAACAAAAGCAACGAGCTTTATATAA
GGAAGAACTTGCTTGGATGAGGGCTGGAGCTAAGGCTCGTACTACAAAGCAACAAGCTAGAATTAATCGATTTAATGACC
TAGAAAATGAAGTTAACCAGCAATATAAAGACGATAAAGGTGAATTGAATCTTGCTTATTCAAGATTAGGTAAGCAAGTG
TTCGAATTAGAAGACTTATCAAAGGCTATTAATGATAAAGTATTATTTGAACATCTGACGGAAATTATTCAAAAAGGTGA
GCGTATTGGTGTTGTTGGGCCAAATGGAGCTGGTAAAACAACACTCTTAAATATTTTGAGTGGAGAAGACCAACAATTCG
AAGGTAAATTGAAGACTGGGCAGACGGTTAAAGTAGCTTATTTTAAGCAAACAGATGAGACCCTAGATAGAGATATTCGT
ATGATTGATTATTTAAGAGAAGAAAGTGAGATCGCAAAAGAAAAAGATGGAACCTCGGTATCTATTACACAACTTCTTGA
ACGATTTTTATTTCCAAGTGCAACTCATGGTAAAAAAGTTTATAAATTATCTGGTGGAGAGCAAAAGCGTTTGTATTTAT
TACGTCTACTCGTACACCAGCCAAATGTTCTGTTGTTAGATGAACCGACAAATGATTTAGATACTGAGACTTTAACAATA
CTTGAAGATTATATTCATACTTTCGGTGGTACAGTGATTACCGTAAGCCATGATCGTTACTTCTTAAATAAAGTTGCACA
GTCATATTGGTTTATTCATGATGGTCAGATGGAAAAGATTATAGGAACTTTTGAAGATTATGAAAGTTATAAAAAATCAT
TAGATAAAAATAAATCCACATTGAACCAACAATCTAAATCTTCTACAACTGTACGTAAGAAAAATGGGTTATCATATAAA
GAAAAATTAGAATATGAACAATTGATGAAACGCATAGAACAAGCGGAAGTAAGAATGGAAGAAATTGATGTGCTCATGAT
TGAGGCAAGTGCAGATTATGGGAAAATTAAAGAATTAAACGAAGAAAAAGAACAACTTGAAATTCAATATGATTTAGACA
TCACAAGATGGAGTGAGTTAGAAGAAATTAAAGAACAACAATAA

Upstream 100 bases:

>100_bases
AATTATGACACTTAACGGTATCGATTTCTTTTGATTTCAAAAAGGTGTATAATGTATAGAACTGATTTAAGTACGTAGAG
ATTTCAACAGAAGAAGGAAG

Downstream 100 bases:

>100_bases
GGGGTCAATTTATGATGCAACAAACATTATCGCATTACTTTGGGTATGAAACGTTTCGACCAGGACAAGAAGAAATTATT
AGCAAAGTATTAGACCATCG

Product: ATP-binding ABC transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 627; Mature: 626

Protein sequence:

>627_residues
MGMEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTANVMHPNQYRIRYSSQKQDLN
EDMTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFKRMMDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKEL
SGGQQKRVVLAKTLIEKPDLLLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGN
YESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQQYKDDKGELNLAYSRLGKQV
FELEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKTTLLNILSGEDQQFEGKLKTGQTVKVAYFKQTDETLDRDIR
MIDYLREESEIAKEKDGTSVSITQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTI
LEDYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKSTLNQQSKSSTTVRKKNGLSYK
EKLEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELNEEKEQLEIQYDLDITRWSELEEIKEQQ

Sequences:

>Translated_627_residues
MGMEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTANVMHPNQYRIRYSSQKQDLN
EDMTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFKRMMDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKEL
SGGQQKRVVLAKTLIEKPDLLLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGN
YESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQQYKDDKGELNLAYSRLGKQV
FELEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKTTLLNILSGEDQQFEGKLKTGQTVKVAYFKQTDETLDRDIR
MIDYLREESEIAKEKDGTSVSITQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTI
LEDYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKSTLNQQSKSSTTVRKKNGLSYK
EKLEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELNEEKEQLEIQYDLDITRWSELEEIKEQQ
>Mature_626_residues
GMEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTANVMHPNQYRIRYSSQKQDLNE
DMTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFKRMMDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKELS
GGQQKRVVLAKTLIEKPDLLLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGNY
ESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQQYKDDKGELNLAYSRLGKQVF
ELEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKTTLLNILSGEDQQFEGKLKTGQTVKVAYFKQTDETLDRDIRM
IDYLREESEIAKEKDGTSVSITQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTIL
EDYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKSTLNQQSKSSTTVRKKNGLSYKE
KLEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELNEEKEQLEIQYDLDITRWSELEEIKEQQ

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=539, Percent_Identity=29.4990723562152, Blast_Score=236, Evalue=5e-62,
Organism=Homo sapiens, GI10947135, Length=538, Percent_Identity=32.3420074349442, Blast_Score=216, Evalue=4e-56,
Organism=Homo sapiens, GI69354671, Length=538, Percent_Identity=32.3420074349442, Blast_Score=216, Evalue=5e-56,
Organism=Homo sapiens, GI27881506, Length=538, Percent_Identity=30.6691449814126, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI10947137, Length=538, Percent_Identity=30.6691449814126, Blast_Score=206, Evalue=6e-53,
Organism=Escherichia coli, GI2367384, Length=537, Percent_Identity=37.4301675977654, Blast_Score=360, Evalue=1e-100,
Organism=Escherichia coli, GI1787182, Length=630, Percent_Identity=33.6507936507937, Blast_Score=325, Evalue=8e-90,
Organism=Escherichia coli, GI1787041, Length=520, Percent_Identity=31.1538461538462, Blast_Score=246, Evalue=3e-66,
Organism=Escherichia coli, GI1789751, Length=595, Percent_Identity=29.7478991596639, Blast_Score=246, Evalue=4e-66,
Organism=Escherichia coli, GI1788225, Length=238, Percent_Identity=26.890756302521, Blast_Score=100, Evalue=5e-22,
Organism=Escherichia coli, GI1788761, Length=241, Percent_Identity=26.5560165975104, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI145693107, Length=568, Percent_Identity=22.887323943662, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1789672, Length=247, Percent_Identity=26.7206477732794, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1787029, Length=235, Percent_Identity=25.9574468085106, Blast_Score=87, Evalue=5e-18,
Organism=Escherichia coli, GI1787105, Length=241, Percent_Identity=27.8008298755187, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1787164, Length=199, Percent_Identity=27.6381909547739, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1788506, Length=232, Percent_Identity=26.7241379310345, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1789891, Length=229, Percent_Identity=23.5807860262009, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1786703, Length=206, Percent_Identity=29.126213592233, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788644, Length=231, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788165, Length=192, Percent_Identity=29.6875, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87081709, Length=231, Percent_Identity=25.1082251082251, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786698, Length=216, Percent_Identity=28.7037037037037, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789963, Length=242, Percent_Identity=24.7933884297521, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786872, Length=204, Percent_Identity=25.9803921568627, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1787758, Length=189, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1787712, Length=212, Percent_Identity=25.4716981132075, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI48994883, Length=239, Percent_Identity=23.8493723849372, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI87081791, Length=223, Percent_Identity=25.5605381165919, Blast_Score=64, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=543, Percent_Identity=30.3867403314917, Blast_Score=241, Evalue=1e-63,
Organism=Caenorhabditis elegans, GI17555318, Length=549, Percent_Identity=29.3260473588342, Blast_Score=215, Evalue=5e-56,
Organism=Caenorhabditis elegans, GI17553372, Length=548, Percent_Identity=32.1167883211679, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17555800, Length=525, Percent_Identity=24.1904761904762, Blast_Score=78, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17542146, Length=293, Percent_Identity=23.8907849829352, Blast_Score=70, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=547, Percent_Identity=31.6270566727605, Blast_Score=218, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6321121, Length=546, Percent_Identity=29.1208791208791, Blast_Score=203, Evalue=6e-53,
Organism=Saccharomyces cerevisiae, GI6324314, Length=384, Percent_Identity=27.6041666666667, Blast_Score=124, Evalue=4e-29,
Organism=Saccharomyces cerevisiae, GI6323278, Length=382, Percent_Identity=27.7486910994764, Blast_Score=123, Evalue=8e-29,
Organism=Saccharomyces cerevisiae, GI6325030, Length=383, Percent_Identity=26.3707571801567, Blast_Score=118, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24642252, Length=553, Percent_Identity=29.6564195298373, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI18859989, Length=553, Percent_Identity=29.6564195298373, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24666836, Length=539, Percent_Identity=29.6846011131725, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24641342, Length=558, Percent_Identity=29.9283154121864, Blast_Score=217, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24659289, Length=199, Percent_Identity=27.1356783919598, Blast_Score=70, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24581191, Length=181, Percent_Identity=30.939226519337, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24581189, Length=181, Percent_Identity=30.939226519337, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24581193, Length=181, Percent_Identity=30.939226519337, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24581195, Length=181, Percent_Identity=30.939226519337, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI28574744, Length=174, Percent_Identity=33.9080459770115, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 72585; Mature: 72454

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTA
CCCCHHHHHHCCHHHCCHHHHCCCCEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCCEE
NVMHPNQYRIRYSSQKQDLNEDMTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFK
ECCCCCCEEEEECCCHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
RMMDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKELSGGQQKRVVLAKTLIEKPDL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCE
LLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGN
EEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEECCCCCCCCCCC
YESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
QYKDDKGELNLAYSRLGKQVFELEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKT
HHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHH
TLLNILSGEDQQFEGKLKTGQTVKVAYFKQTDETLDRDIRMIDYLREESEIAKEKDGTSV
HHHHHHCCCCHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
SITQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTI
EHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHH
LEDYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKST
HHHHHHHHCCEEEEEECCHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHCCHHH
LNQQSKSSTTVRKKNGLSYKEKLEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELN
HHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHC
EEKEQLEIQYDLDITRWSELEEIKEQQ
CHHHHEEEEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure 
GMEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTA
CCCHHHHHHCCHHHCCHHHHCCCCEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCCEE
NVMHPNQYRIRYSSQKQDLNEDMTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFK
ECCCCCCEEEEECCCHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
RMMDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKELSGGQQKRVVLAKTLIEKPDL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCE
LLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGN
EEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEECCCCCCCCCCC
YESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
QYKDDKGELNLAYSRLGKQVFELEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKT
HHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHH
TLLNILSGEDQQFEGKLKTGQTVKVAYFKQTDETLDRDIRMIDYLREESEIAKEKDGTSV
HHHHHHCCCCHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
SITQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTI
EHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHH
LEDYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKST
HHHHHHHHCCEEEEEECCHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHCCHHH
LNQQSKSSTTVRKKNGLSYKEKLEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELN
HHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHC
EEKEQLEIQYDLDITRWSELEEIKEQQ
CHHHHEEEEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]