Definition | Staphylococcus aureus RF122, complete genome. |
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Accession | NC_007622 |
Length | 2,742,531 |
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The map label for this gene is proP
Identifier: 82750278
GI number: 82750278
Start: 589380
End: 590780
Strand: Direct
Name: proP
Synonym: SAB0523
Alternate gene names: 82750278
Gene position: 589380-590780 (Clockwise)
Preceding gene: 82750277
Following gene: 82750279
Centisome position: 21.49
GC content: 34.33
Gene sequence:
>1401_bases ATGGATTTTAATAAAGAGAATATTAACATGGTGGATGCAAAGAAAGCTAAAAAGACTGTTGTTGCAACCGGTATCGGTAA TGCAATGGAATGGTTCGATTTTGGTGTCTATGCATATACAACTGCGTACATTGGAGCGAACTTCTTCTCTCCAGTAGAGA GTGCAGACATTCGACAAATGTTGACTTTCGTAGCATTAGCCATTGCGTTTTTATTAAGACCAATTGGTGGTGTTGTATTT GGTATTATTGGTGACAAATATGGACGTAAAGTTGTATTAACATCAACAATTATTTTAATGGCATTTTCAACATTAACCAT TGGATTATTGCCAAGCTATGATCAAATTGGACTTTGGGCACCAATACTATTATTGCTTGCAAGAGTACTACAAGGGTTTT CAACAGGTGGAGAGTATGCGGGGGCAATGACATATGTTGCGGAGTCATCTCCAGATAAGCGTCGTAACTCATTAGGTAGT GGACTAGAAATTGGGACATTATCAGGTTACATAGCTGCTTCAATTATGATTGCTGTATTAACATTCTTTTTAACAGATGA ACAAATGGCATCATTTGGTTGGAGAATCCCATTCTTACTTGGTTTATTCCTAGGATTATTTGGCTTATATTTACGTCGTA AGCTTGAAGAATCACCAGTTTTCGAAAATGATGTTGCAACACAACCAGAAAGAGATAACATTAACTTTTTACAAATCATC AGATTTTATTACAAAGATATATTTGTATGTTTTGTAGCTGTTGTGTTCTTCAATGTTACGAACTATATGGTAACTGCATA TTTACCAACCTATTTAGAACAAGTTATTAAATTAGATGCAACGACAACAAGTGTATTAATTACTTGTGTCATGGCAATAA TGATTCCATTAGCATTAATGTTTGGTAAGTTAGCGGATAAAATAGGTGAAAAGAAAGTATTTTTAATTGGTACTGGTGGG CTAACATTATTCAGCATCATCGCATTTATGTTATTGCATTCACAATCATTTGTTGTAATAGTAATCGGTATATTTATATT AGGATTTTTCTTATTAACTTACGAAGCGACAATGCCAGGGTCGTTACCAACGATGTTTTACAGTCATATAAGATATCGAA CTTTATCAGTAACATTTAATATCTCTGTTTCGATATTTGGTGGTACGACGCCATTAGTTGCAACATGGTTAGTTACGAAA ACTGGAGATCCATTAGCACCTGCGTATTATTTAACAGCAATCAGTGTTATTGGCTTTTTAGTTATTACATTCTTACATTT AAGTACAGCAGGAAAATCTCTAAAAGGTTCGTATCCAAATGTAGATAACGAGCAAGATAGAGCTTATTATGCAGAACACC CAAAAGAAGCATTATGGTGGGTTAAAGAACGTAAAGATTAG
Upstream 100 bases:
>100_bases ATACTTTTGTATTTATATAAAAGTTTAAATTCTTATAAATTTGACAAAACTAATTAACTCCGTATAATTATGAAACATAC AAGAGTGAGTGTATGAATTC
Downstream 100 bases:
>100_bases AGATTTCAGTAAATATAATAATCAATCGTATAAAAGCACTTTAAAGCTAGTAAACGCTACTAACTTTAAAGTGCTTTTTA AATTGAGAACTGTAATTAAC
Product: proline/betaine transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MDFNKENINMVDAKKAKKTVVATGIGNAMEWFDFGVYAYTTAYIGANFFSPVESADIRQMLTFVALAIAFLLRPIGGVVF GIIGDKYGRKVVLTSTIILMAFSTLTIGLLPSYDQIGLWAPILLLLARVLQGFSTGGEYAGAMTYVAESSPDKRRNSLGS GLEIGTLSGYIAASIMIAVLTFFLTDEQMASFGWRIPFLLGLFLGLFGLYLRRKLEESPVFENDVATQPERDNINFLQII RFYYKDIFVCFVAVVFFNVTNYMVTAYLPTYLEQVIKLDATTTSVLITCVMAIMIPLALMFGKLADKIGEKKVFLIGTGG LTLFSIIAFMLLHSQSFVVIVIGIFILGFFLLTYEATMPGSLPTMFYSHIRYRTLSVTFNISVSIFGGTTPLVATWLVTK TGDPLAPAYYLTAISVIGFLVITFLHLSTAGKSLKGSYPNVDNEQDRAYYAEHPKEALWWVKERKD
Sequences:
>Translated_466_residues MDFNKENINMVDAKKAKKTVVATGIGNAMEWFDFGVYAYTTAYIGANFFSPVESADIRQMLTFVALAIAFLLRPIGGVVF GIIGDKYGRKVVLTSTIILMAFSTLTIGLLPSYDQIGLWAPILLLLARVLQGFSTGGEYAGAMTYVAESSPDKRRNSLGS GLEIGTLSGYIAASIMIAVLTFFLTDEQMASFGWRIPFLLGLFLGLFGLYLRRKLEESPVFENDVATQPERDNINFLQII RFYYKDIFVCFVAVVFFNVTNYMVTAYLPTYLEQVIKLDATTTSVLITCVMAIMIPLALMFGKLADKIGEKKVFLIGTGG LTLFSIIAFMLLHSQSFVVIVIGIFILGFFLLTYEATMPGSLPTMFYSHIRYRTLSVTFNISVSIFGGTTPLVATWLVTK TGDPLAPAYYLTAISVIGFLVITFLHLSTAGKSLKGSYPNVDNEQDRAYYAEHPKEALWWVKERKD >Mature_466_residues MDFNKENINMVDAKKAKKTVVATGIGNAMEWFDFGVYAYTTAYIGANFFSPVESADIRQMLTFVALAIAFLLRPIGGVVF GIIGDKYGRKVVLTSTIILMAFSTLTIGLLPSYDQIGLWAPILLLLARVLQGFSTGGEYAGAMTYVAESSPDKRRNSLGS GLEIGTLSGYIAASIMIAVLTFFLTDEQMASFGWRIPFLLGLFLGLFGLYLRRKLEESPVFENDVATQPERDNINFLQII RFYYKDIFVCFVAVVFFNVTNYMVTAYLPTYLEQVIKLDATTTSVLITCVMAIMIPLALMFGKLADKIGEKKVFLIGTGG LTLFSIIAFMLLHSQSFVVIVIGIFILGFFLLTYEATMPGSLPTMFYSHIRYRTLSVTFNISVSIFGGTTPLVATWLVTK TGDPLAPAYYLTAISVIGFLVITFLHLSTAGKSLKGSYPNVDNEQDRAYYAEHPKEALWWVKERKD
Specific function: May be a proton symporter invoved in the uptake of osmolytes such as proline and glycine betaine [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=457, Percent_Identity=37.636761487965, Blast_Score=337, Evalue=1e-93, Organism=Escherichia coli, GI1788292, Length=423, Percent_Identity=31.2056737588652, Blast_Score=197, Evalue=8e-52, Organism=Escherichia coli, GI1788942, Length=430, Percent_Identity=30.4651162790698, Blast_Score=178, Evalue=6e-46, Organism=Escherichia coli, GI1789941, Length=397, Percent_Identity=33.2493702770781, Blast_Score=172, Evalue=3e-44, Organism=Escherichia coli, GI87082404, Length=398, Percent_Identity=27.1356783919598, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI87082231, Length=438, Percent_Identity=23.0593607305936, Blast_Score=87, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 51686; Mature: 51686
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFNKENINMVDAKKAKKTVVATGIGNAMEWFDFGVYAYTTAYIGANFFSPVESADIRQM CCCCCCCCCCCCHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHH LTFVALAIAFLLRPIGGVVFGIIGDKYGRKVVLTSTIILMAFSTLTIGLLPSYDQIGLWA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHH PILLLLARVLQGFSTGGEYAGAMTYVAESSPDKRRNSLGSGLEIGTLSGYIAASIMIAVL HHHHHHHHHHHCCCCCCCHHHHHHEEECCCCHHHHHHCCCCCEECHHHHHHHHHHHHHHH TFFLTDEQMASFGWRIPFLLGLFLGLFGLYLRRKLEESPVFENDVATQPERDNINFLQII HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH RFYYKDIFVCFVAVVFFNVTNYMVTAYLPTYLEQVIKLDATTTSVLITCVMAIMIPLALM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FGKLADKIGEKKVFLIGTGGLTLFSIIAFMLLHSQSFVVIVIGIFILGFFLLTYEATMPG HHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC SLPTMFYSHIRYRTLSVTFNISVSIFGGTTPLVATWLVTKTGDPLAPAYYLTAISVIGFL CHHHHHHHHHHEEEEEEEEEEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH VITFLHLSTAGKSLKGSYPNVDNEQDRAYYAEHPKEALWWVKERKD HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MDFNKENINMVDAKKAKKTVVATGIGNAMEWFDFGVYAYTTAYIGANFFSPVESADIRQM CCCCCCCCCCCCHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHH LTFVALAIAFLLRPIGGVVFGIIGDKYGRKVVLTSTIILMAFSTLTIGLLPSYDQIGLWA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHH PILLLLARVLQGFSTGGEYAGAMTYVAESSPDKRRNSLGSGLEIGTLSGYIAASIMIAVL HHHHHHHHHHHCCCCCCCHHHHHHEEECCCCHHHHHHCCCCCEECHHHHHHHHHHHHHHH TFFLTDEQMASFGWRIPFLLGLFLGLFGLYLRRKLEESPVFENDVATQPERDNINFLQII HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH RFYYKDIFVCFVAVVFFNVTNYMVTAYLPTYLEQVIKLDATTTSVLITCVMAIMIPLALM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FGKLADKIGEKKVFLIGTGGLTLFSIIAFMLLHSQSFVVIVIGIFILGFFLLTYEATMPG HHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC SLPTMFYSHIRYRTLSVTFNISVSIFGGTTPLVATWLVTKTGDPLAPAYYLTAISVIGFL CHHHHHHHHHHEEEEEEEEEEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH VITFLHLSTAGKSLKGSYPNVDNEQDRAYYAEHPKEALWWVKERKD HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10708580 [H]