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The map label for this gene is araB [H]

Identifier: 82750260

GI number: 82750260

Start: 564640

End: 566277

Strand: Direct

Name: araB [H]

Synonym: SAB0503

Alternate gene names: 82750260

Gene position: 564640-566277 (Clockwise)

Preceding gene: 82750259

Following gene: 82750261

Centisome position: 20.59

GC content: 32.72

Gene sequence:

>1638_bases
ATGTCTTATAGCATTGGAATTGATTATGGAACTGCTTCAGGCCGTGTGTTTTTAATTAATACAACTAACGGTCAAGTAGT
ATCAAAATTTGTGAAACCATATACACATGGTGTCATTGAGAGTGAATTAAATGGTTTAAAAATACCACATACATATGCAC
TTCAAAATAGTAATGATTATTTAGAAATTATGGAAGAAGGAATATCATATATAGTACGTGAATCAAAAATAGATCCAGTC
AATATAGTAGGTATTGGTATAGACTTTACTTCATCTACTATTATTTTTACTGACGAAAACATTAACCCGGTACATAATTT
AAAACAATTTAAAAACAATCCACATGCGTATGTGAAACTTTGGAAACATCATGGTGCATATAAAGAAGCAGAGAAATTAT
ATCAAACTGCTATTGAAAATAATAATAAGTGGTTAGGCCATTATGGATATAATGTTAGTAGTGAATGGATGATTCCCAAA
ATAATGGAGGTCATGAATAGAGCACCAGAAATTATGGAAAAAACGGCTTATATTATGGAAGCGGGCGATTGGATTGTAAA
TAAATTAACTAATAAAAATGTACGCTCGAATTGTGGATTAGGTTTCAAAGCATTTTGGGAAGAGGAAACAGGGTTTCATT
ATGATTTATTTGATAAAATAGACCCCAAATTATCAAAAGTAATTCAAGATAAAGTATCTGCACCGGTTGTTAATATTGGT
GAAGCAGTAGGGAAACTGGACGATAAAATGGCACAGAAATTAGGATTATCAAAAGAGACTATGGTAAGTCCTTTTATTAT
TGATGCCCATGCTAGTTTATTAGGTATTGGGTCTGAAAAAGATAAAGAAATGACTATGGTGTTGGGAACAAGCACATGCC
ATCTTATGTTAAATGAAAAGCAACATCAAGTGCCAGGTATATCAGGTTCTGTAAAAGGAGCAATTATTCCAGAATTATTT
GCTTATGAAGCGGGACAATCAGCAGTAGGTGATTTGTTTGAGTATGTCGCTAAGCAAGCACCAAAGTCATATGTAGATGA
AGCAGCAAATAGAAATATGACTGTATTTGAATTAATGAATGAAAAGATAAAACATCAAATGCCAGGTGAAAGTGGGCTCA
TTGCTCTTGATTGGCATAATGGAAATCGAAGTGTATTAAGTGATAGCAATTTAACAGGTTGTATCTTTGGATTAACTTTA
CAAACTAAGCATGAGGATATTTATAGAGCATATTTAGAAGCTACAGCATTTGGTACTAAGATGATTATGCAACAGTATCA
AGATTGGCATATGGAAGTAGAAAAAGTATTTGCATGTGGCGGTATACCTAAAAAGAATGCTGTTATGATGGATATCTATG
CGAATGTACTGAACAAAAAACTAATTGTTATGGATAGTGAGTATGCACCAGCAATAGGCGCAGCAATATTAGGTGCAGTC
AGTGGTGGCGCACATAATTCAATTAATGATGCAGTTGATGCTATGAAAGAGCCAATTTTATACGAAATTAATCCAGAAGC
GGAAAAAGTACAAAGATATGAAACATTATTTAAAGCTTATAAGGCTTTACATGATATCCATGGTTATAAAAAAGCTAATA
TAATGAAAGATATCCAAAGTTTAAGAGTTGAGGGATAA

Upstream 100 bases:

>100_bases
AAATTTAAGTGATACTTGTAAAATAGAACCTATTATGAGTATGATTTAAGAAAACGCTTGCAAAACTAATAACCGCAACT
AGCGATATGGAGGAAACATG

Downstream 100 bases:

>100_bases
AAAATTTAATTTGACAGTAATTAGTAATATTCAACGCTATAAATTACTAAAATCAATTAATACAGCTAGAATTTTCATTT
ACAGAAATATCAGCAACATG

Product: ribulokinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 544

Protein sequence:

>545_residues
MSYSIGIDYGTASGRVFLINTTNGQVVSKFVKPYTHGVIESELNGLKIPHTYALQNSNDYLEIMEEGISYIVRESKIDPV
NIVGIGIDFTSSTIIFTDENINPVHNLKQFKNNPHAYVKLWKHHGAYKEAEKLYQTAIENNNKWLGHYGYNVSSEWMIPK
IMEVMNRAPEIMEKTAYIMEAGDWIVNKLTNKNVRSNCGLGFKAFWEEETGFHYDLFDKIDPKLSKVIQDKVSAPVVNIG
EAVGKLDDKMAQKLGLSKETMVSPFIIDAHASLLGIGSEKDKEMTMVLGTSTCHLMLNEKQHQVPGISGSVKGAIIPELF
AYEAGQSAVGDLFEYVAKQAPKSYVDEAANRNMTVFELMNEKIKHQMPGESGLIALDWHNGNRSVLSDSNLTGCIFGLTL
QTKHEDIYRAYLEATAFGTKMIMQQYQDWHMEVEKVFACGGIPKKNAVMMDIYANVLNKKLIVMDSEYAPAIGAAILGAV
SGGAHNSINDAVDAMKEPILYEINPEAEKVQRYETLFKAYKALHDIHGYKKANIMKDIQSLRVEG

Sequences:

>Translated_545_residues
MSYSIGIDYGTASGRVFLINTTNGQVVSKFVKPYTHGVIESELNGLKIPHTYALQNSNDYLEIMEEGISYIVRESKIDPV
NIVGIGIDFTSSTIIFTDENINPVHNLKQFKNNPHAYVKLWKHHGAYKEAEKLYQTAIENNNKWLGHYGYNVSSEWMIPK
IMEVMNRAPEIMEKTAYIMEAGDWIVNKLTNKNVRSNCGLGFKAFWEEETGFHYDLFDKIDPKLSKVIQDKVSAPVVNIG
EAVGKLDDKMAQKLGLSKETMVSPFIIDAHASLLGIGSEKDKEMTMVLGTSTCHLMLNEKQHQVPGISGSVKGAIIPELF
AYEAGQSAVGDLFEYVAKQAPKSYVDEAANRNMTVFELMNEKIKHQMPGESGLIALDWHNGNRSVLSDSNLTGCIFGLTL
QTKHEDIYRAYLEATAFGTKMIMQQYQDWHMEVEKVFACGGIPKKNAVMMDIYANVLNKKLIVMDSEYAPAIGAAILGAV
SGGAHNSINDAVDAMKEPILYEINPEAEKVQRYETLFKAYKALHDIHGYKKANIMKDIQSLRVEG
>Mature_544_residues
SYSIGIDYGTASGRVFLINTTNGQVVSKFVKPYTHGVIESELNGLKIPHTYALQNSNDYLEIMEEGISYIVRESKIDPVN
IVGIGIDFTSSTIIFTDENINPVHNLKQFKNNPHAYVKLWKHHGAYKEAEKLYQTAIENNNKWLGHYGYNVSSEWMIPKI
MEVMNRAPEIMEKTAYIMEAGDWIVNKLTNKNVRSNCGLGFKAFWEEETGFHYDLFDKIDPKLSKVIQDKVSAPVVNIGE
AVGKLDDKMAQKLGLSKETMVSPFIIDAHASLLGIGSEKDKEMTMVLGTSTCHLMLNEKQHQVPGISGSVKGAIIPELFA
YEAGQSAVGDLFEYVAKQAPKSYVDEAANRNMTVFELMNEKIKHQMPGESGLIALDWHNGNRSVLSDSNLTGCIFGLTLQ
TKHEDIYRAYLEATAFGTKMIMQQYQDWHMEVEKVFACGGIPKKNAVMMDIYANVLNKKLIVMDSEYAPAIGAAILGAVS
GGAHNSINDAVDAMKEPILYEINPEAEKVQRYETLFKAYKALHDIHGYKKANIMKDIQSLRVEG

Specific function: Unknown

COG id: COG1069

COG function: function code C; Ribulose kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulokinase family [H]

Homologues:

Organism=Homo sapiens, GI164663828, Length=567, Percent_Identity=25.2204585537919, Blast_Score=146, Evalue=4e-35,
Organism=Homo sapiens, GI164663830, Length=591, Percent_Identity=24.1962774957699, Blast_Score=133, Evalue=4e-31,
Organism=Escherichia coli, GI1786249, Length=550, Percent_Identity=29.8181818181818, Blast_Score=235, Evalue=5e-63,
Organism=Saccharomyces cerevisiae, GI6320314, Length=529, Percent_Identity=25.8979206049149, Blast_Score=145, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24657106, Length=551, Percent_Identity=26.497277676951, Blast_Score=141, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24657102, Length=551, Percent_Identity=26.497277676951, Blast_Score=141, Evalue=1e-33,
Organism=Drosophila melanogaster, GI21356323, Length=407, Percent_Identity=28.2555282555283, Blast_Score=124, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR005929 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.16 [H]

Molecular weight: Translated: 60920; Mature: 60788

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYSIGIDYGTASGRVFLINTTNGQVVSKFVKPYTHGVIESELNGLKIPHTYALQNSNDY
CCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHH
LEIMEEGISYIVRESKIDPVNIVGIGIDFTSSTIIFTDENINPVHNLKQFKNNPHAYVKL
HHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEECCCCCHHHHHHHHCCCCHHEEEE
WKHHGAYKEAEKLYQTAIENNNKWLGHYGYNVSSEWMIPKIMEVMNRAPEIMEKTAYIME
HHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHH
AGDWIVNKLTNKNVRSNCGLGFKAFWEEETGFHYDLFDKIDPKLSKVIQDKVSAPVVNIG
CCHHHHHHHCCCCCCCCCCCCHHEEECCCCCCEEEHHHHCCHHHHHHHHHHHCCCHHHHH
EAVGKLDDKMAQKLGLSKETMVSPFIIDAHASLLGIGSEKDKEMTMVLGTSTCHLMLNEK
HHHHHHHHHHHHHHCCCHHHHCCCEEEECCHHHEECCCCCCCCEEEEEECCEEEEEECCC
QHQVPGISGSVKGAIIPELFAYEAGQSAVGDLFEYVAKQAPKSYVDEAANRNMTVFELMN
HHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHH
EKIKHQMPGESGLIALDWHNGNRSVLSDSNLTGCIFGLTLQTKHEDIYRAYLEATAFGTK
HHHHHCCCCCCCEEEEEEECCCCCEECCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHH
MIMQQYQDWHMEVEKVFACGGIPKKNAVMMDIYANVLNKKLIVMDSEYAPAIGAAILGAV
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH
SGGAHNSINDAVDAMKEPILYEINPEAEKVQRYETLFKAYKALHDIHGYKKANIMKDIQS
CCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LRVEG
HCCCC
>Mature Secondary Structure 
SYSIGIDYGTASGRVFLINTTNGQVVSKFVKPYTHGVIESELNGLKIPHTYALQNSNDY
CEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHH
LEIMEEGISYIVRESKIDPVNIVGIGIDFTSSTIIFTDENINPVHNLKQFKNNPHAYVKL
HHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEECCCCCHHHHHHHHCCCCHHEEEE
WKHHGAYKEAEKLYQTAIENNNKWLGHYGYNVSSEWMIPKIMEVMNRAPEIMEKTAYIME
HHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHH
AGDWIVNKLTNKNVRSNCGLGFKAFWEEETGFHYDLFDKIDPKLSKVIQDKVSAPVVNIG
CCHHHHHHHCCCCCCCCCCCCHHEEECCCCCCEEEHHHHCCHHHHHHHHHHHCCCHHHHH
EAVGKLDDKMAQKLGLSKETMVSPFIIDAHASLLGIGSEKDKEMTMVLGTSTCHLMLNEK
HHHHHHHHHHHHHHCCCHHHHCCCEEEECCHHHEECCCCCCCCEEEEEECCEEEEEECCC
QHQVPGISGSVKGAIIPELFAYEAGQSAVGDLFEYVAKQAPKSYVDEAANRNMTVFELMN
HHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHH
EKIKHQMPGESGLIALDWHNGNRSVLSDSNLTGCIFGLTLQTKHEDIYRAYLEATAFGTK
HHHHHCCCCCCCEEEEEEECCCCCEECCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHH
MIMQQYQDWHMEVEKVFACGGIPKKNAVMMDIYANVLNKKLIVMDSEYAPAIGAAILGAV
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH
SGGAHNSINDAVDAMKEPILYEINPEAEKVQRYETLFKAYKALHDIHGYKKANIMKDIQS
CCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LRVEG
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA