Click here to switch to the map view.

The map label for this gene is yabN [H]

Identifier: 82750212

GI number: 82750212

Start: 502898

End: 504091

Strand: Direct

Name: yabN [H]

Synonym: SAB0454

Alternate gene names: 82750212

Gene position: 502898-504091 (Clockwise)

Preceding gene: 82750211

Following gene: 82750213

Centisome position: 18.34

GC content: 35.01

Gene sequence:

>1194_bases
ATGGCACATACCATTACGATTGTTGGCTTAGGAAACTATGGCATTGATGATTTGCCACTAGGGATATATAAATTTTTAAA
GACACAAGATAAAGTTTATGCAAGAACGTTAGATCATCCAGTTATAGAATCATTGCAAGATGAATTAACATTTCAGAGTT
TTGACCATGTTTATGAAACACATGACCAATTTGAAGATGTCTATAATGATATTGTGGCACAATTGGTTGAAGCTGCTAAT
GAAAAAGATATTGTCTATGCGGTTCCGGGTCATCCTAGAGTTGCTGAGACAACTACAGTGAAATTACTGGCTTTAGCAAA
GGACAATACTGATATAGATGTGAAAGTTTTAGGTGGGAAAAGCTTTATTGATGATGTTTTTGAAGCAGTTAATGTAGATC
CAAATGATGGCTTCACACTGTTAGATGCGACATCATTACAAGAAGTAACACTTAATGTTAGAACGCATACATTGATTACG
CAAGTTTATAGTGCAATGGTTGCTGCTAATTTGAAAATCACTTTAATGGAACGATATCCTGATGATTACCCTGTTCAAAT
TGTCACTGGTGCACGAAGCGATGGTGCGGATAACGTTGTGACATGCCCATTATATGAATTGGATCATGATGAAAATGCAT
TCAATAATTTGACGAGTGTATTCGTACCAAAAATCACAACACCGACATATTTGTATCATGACTTTGATTTTGCAACGGAA
GTGATTGATACTTTAGTTGATGAAGATAAGGGTTGTCCATGGGATAAAGTGCAAACGCATGAAACGCTTAAACGTTATTT
ACTTGAAGAAACATTTGAATTGTTCGAAGCTATTGACAATGAAGATGATTGGCATATGATTGAAGAACTAGGAGATATTT
TATTACAAGTGTTATTGCATACTAGTATTGGTAAAAAAGAAGGGTATATCGACATTAAAGAAGTGATTACAAGTCTTAAT
GCTAAAATGATTCGTAGACACCCACACATATTTGGTGATGCCAATGCTGAAACTATCGATGACTTAAAAGAAATTTGGTC
TAAGGCGAAAGATGCTGAAGGTAAACAGCCAAGAGTTAAATTTGAAAAAGTATTTGCAGAGCATTTTTTAAATTTATATG
AGAAGACGAAGGATAAGTCATTTGATGAGGCCGCGTTAAAGCAGTGGCTAGAAAAAGGGGAGAGTAATACATGA

Upstream 100 bases:

>100_bases
TGTTTTTCTATATTTTTAGATTTAATGTTTTGACATATAAAGAGTTAACTTATTTACCATTTGGTTCAAAGTTGTATCAA
ATTAAGAAAGGAAGACGTTG

Downstream 100 bases:

>100_bases
GATTAGATAAATATTTAAAAGTATCACGGTTAATAAAGCGACGTACGCTAGCAAAAGAGGTAAGTGATCAAGGTAGAATT
ACAATAAATGGTAATGTTGC

Product: tetrapyrrole methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MAHTITIVGLGNYGIDDLPLGIYKFLKTQDKVYARTLDHPVIESLQDELTFQSFDHVYETHDQFEDVYNDIVAQLVEAAN
EKDIVYAVPGHPRVAETTTVKLLALAKDNTDIDVKVLGGKSFIDDVFEAVNVDPNDGFTLLDATSLQEVTLNVRTHTLIT
QVYSAMVAANLKITLMERYPDDYPVQIVTGARSDGADNVVTCPLYELDHDENAFNNLTSVFVPKITTPTYLYHDFDFATE
VIDTLVDEDKGCPWDKVQTHETLKRYLLEETFELFEAIDNEDDWHMIEELGDILLQVLLHTSIGKKEGYIDIKEVITSLN
AKMIRRHPHIFGDANAETIDDLKEIWSKAKDAEGKQPRVKFEKVFAEHFLNLYEKTKDKSFDEAALKQWLEKGESNT

Sequences:

>Translated_397_residues
MAHTITIVGLGNYGIDDLPLGIYKFLKTQDKVYARTLDHPVIESLQDELTFQSFDHVYETHDQFEDVYNDIVAQLVEAAN
EKDIVYAVPGHPRVAETTTVKLLALAKDNTDIDVKVLGGKSFIDDVFEAVNVDPNDGFTLLDATSLQEVTLNVRTHTLIT
QVYSAMVAANLKITLMERYPDDYPVQIVTGARSDGADNVVTCPLYELDHDENAFNNLTSVFVPKITTPTYLYHDFDFATE
VIDTLVDEDKGCPWDKVQTHETLKRYLLEETFELFEAIDNEDDWHMIEELGDILLQVLLHTSIGKKEGYIDIKEVITSLN
AKMIRRHPHIFGDANAETIDDLKEIWSKAKDAEGKQPRVKFEKVFAEHFLNLYEKTKDKSFDEAALKQWLEKGESNT
>Mature_396_residues
AHTITIVGLGNYGIDDLPLGIYKFLKTQDKVYARTLDHPVIESLQDELTFQSFDHVYETHDQFEDVYNDIVAQLVEAANE
KDIVYAVPGHPRVAETTTVKLLALAKDNTDIDVKVLGGKSFIDDVFEAVNVDPNDGFTLLDATSLQEVTLNVRTHTLITQ
VYSAMVAANLKITLMERYPDDYPVQIVTGARSDGADNVVTCPLYELDHDENAFNNLTSVFVPKITTPTYLYHDFDFATEV
IDTLVDEDKGCPWDKVQTHETLKRYLLEETFELFEAIDNEDDWHMIEELGDILLQVLLHTSIGKKEGYIDIKEVITSLNA
KMIRRHPHIFGDANAETIDDLKEIWSKAKDAEGKQPRVKFEKVFAEHFLNLYEKTKDKSFDEAALKQWLEKGESNT

Specific function: Unknown

COG id: COG3956

COG function: function code R; Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789144, Length=116, Percent_Identity=38.7931034482759, Blast_Score=99, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR004518
- InterPro:   IPR011551 [H]

Pfam domain/function: PF03819 MazG; PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 45140; Mature: 45009

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHTITIVGLGNYGIDDLPLGIYKFLKTQDKVYARTLDHPVIESLQDELTFQSFDHVYET
CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
HDQFEDVYNDIVAQLVEAANEKDIVYAVPGHPRVAETTTVKLLALAKDNTDIDVKVLGGK
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHEEEEEEECCCCCEEEEEECCH
SFIDDVFEAVNVDPNDGFTLLDATSLQEVTLNVRTHTLITQVYSAMVAANLKITLMERYP
HHHHHHHHHCCCCCCCCEEEEECCCHHHHEEHHHHHHHHHHHHHHHHHHCCEEEEEECCC
DDYPVQIVTGARSDGADNVVTCPLYELDHDENAFNNLTSVFVPKITTPTYLYHDFDFATE
CCCCEEEEECCCCCCCCCEEECCEEECCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHH
VIDTLVDEDKGCPWDKVQTHETLKRYLLEETFELFEAIDNEDDWHMIEELGDILLQVLLH
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
TSIGKKEGYIDIKEVITSLNAKMIRRHPHIFGDANAETIDDLKEIWSKAKDAEGKQPRVK
HHCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHH
FEKVFAEHFLNLYEKTKDKSFDEAALKQWLEKGESNT
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AHTITIVGLGNYGIDDLPLGIYKFLKTQDKVYARTLDHPVIESLQDELTFQSFDHVYET
CEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
HDQFEDVYNDIVAQLVEAANEKDIVYAVPGHPRVAETTTVKLLALAKDNTDIDVKVLGGK
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHEEEEEEECCCCCEEEEEECCH
SFIDDVFEAVNVDPNDGFTLLDATSLQEVTLNVRTHTLITQVYSAMVAANLKITLMERYP
HHHHHHHHHCCCCCCCCEEEEECCCHHHHEEHHHHHHHHHHHHHHHHHHCCEEEEEECCC
DDYPVQIVTGARSDGADNVVTCPLYELDHDENAFNNLTSVFVPKITTPTYLYHDFDFATE
CCCCEEEEECCCCCCCCCEEECCEEECCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHH
VIDTLVDEDKGCPWDKVQTHETLKRYLLEETFELFEAIDNEDDWHMIEELGDILLQVLLH
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
TSIGKKEGYIDIKEVITSLNAKMIRRHPHIFGDANAETIDDLKEIWSKAKDAEGKQPRVK
HHCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHH
FEKVFAEHFLNLYEKTKDKSFDEAALKQWLEKGESNT
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]