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The map label for this gene is yobA [H]

Identifier: 82703438

GI number: 82703438

Start: 2640258

End: 2640683

Strand: Reverse

Name: yobA [H]

Synonym: Nmul_A2321

Alternate gene names: 82703438

Gene position: 2640683-2640258 (Counterclockwise)

Preceding gene: 82703439

Following gene: 82703437

Centisome position: 82.93

GC content: 59.86

Gene sequence:

>426_bases
ATGCAACCATCGATGATATCTGCCGACAGGAGAGCAAGTGTTCACTTACTGGCAGGCAGCCTTTTGTCGTTCCTGCTGCT
GGTAGCGGGGCTGCACAGCAGCCCGGCGCTGGCGCACGCCATGCTGGTCAAGGCAGAACCTGCGCGCCGCGCGCAACTGA
CCCAGGCCCCCACCCAGGTGCGGCTGTTCTTCAACGAAGAAGTCGAAAAGGACTATGCCGCACTCTCCGTACTCGACGCC
TCCAAGACCCCTGTCACCGAAACCAAACCGCATATCGATGCCAACGACCCCAAAGCCATCGTTCTGCCCCTGCCGGAATT
GAGCCCGGGCAAGTACACGGTCAAGTTCCGGGTGCTGTCGGTGGACGGGCATGTGGTTGACTCGTCCCACGACTTCACGA
TAAAGAACAAAGCCGCCGCGAAATGA

Upstream 100 bases:

>100_bases
ATCGAACAAGAACAACCGGGGACAAATAAAAAAGACAAGGACCACAGTGGCTGCCCGAAGCCCGATCTTCGGGTGCAGAG
CCCATATAAGAGGAGCAAAA

Downstream 100 bases:

>100_bases
TCGAGGTCATCGCGACGCTCCTGCGCTGGGCGCAGCTGGCGTCCAACATGATCCTGGTGGGGGGCTGCGTGTTTCTGGCC
ATTGCCGGCTCCGTCCACTC

Product: copper resistance protein CopC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MQPSMISADRRASVHLLAGSLLSFLLLVAGLHSSPALAHAMLVKAEPARRAQLTQAPTQVRLFFNEEVEKDYAALSVLDA
SKTPVTETKPHIDANDPKAIVLPLPELSPGKYTVKFRVLSVDGHVVDSSHDFTIKNKAAAK

Sequences:

>Translated_141_residues
MQPSMISADRRASVHLLAGSLLSFLLLVAGLHSSPALAHAMLVKAEPARRAQLTQAPTQVRLFFNEEVEKDYAALSVLDA
SKTPVTETKPHIDANDPKAIVLPLPELSPGKYTVKFRVLSVDGHVVDSSHDFTIKNKAAAK
>Mature_141_residues
MQPSMISADRRASVHLLAGSLLSFLLLVAGLHSSPALAHAMLVKAEPARRAQLTQAPTQVRLFFNEEVEKDYAALSVLDA
SKTPVTETKPHIDANDPKAIVLPLPELSPGKYTVKFRVLSVDGHVVDSSHDFTIKNKAAAK

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopC family [H]

Homologues:

Organism=Escherichia coli, GI1788146, Length=111, Percent_Identity=32.4324324324324, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC [H]

EC number: NA

Molecular weight: Translated: 15234; Mature: 15234

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPSMISADRRASVHLLAGSLLSFLLLVAGLHSSPALAHAMLVKAEPARRAQLTQAPTQV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCHHHHHCCCCCEE
RLFFNEEVEKDYAALSVLDASKTPVTETKPHIDANDPKAIVLPLPELSPGKYTVKFRVLS
EEEECCCHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEE
VDGHVVDSSHDFTIKNKAAAK
ECCEEECCCCCEEECCCCCCC
>Mature Secondary Structure
MQPSMISADRRASVHLLAGSLLSFLLLVAGLHSSPALAHAMLVKAEPARRAQLTQAPTQV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCHHHHHCCCCCEE
RLFFNEEVEKDYAALSVLDASKTPVTETKPHIDANDPKAIVLPLPELSPGKYTVKFRVLS
EEEECCCHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEE
VDGHVVDSSHDFTIKNKAAAK
ECCEEECCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]