| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is rfaB [C]
Identifier: 82703384
GI number: 82703384
Start: 2575147
End: 2577531
Strand: Reverse
Name: rfaB [C]
Synonym: Nmul_A2266
Alternate gene names: 82703384
Gene position: 2577531-2575147 (Counterclockwise)
Preceding gene: 82703385
Following gene: 82703382
Centisome position: 80.95
GC content: 55.18
Gene sequence:
>2385_bases ATGCTGCACAAATTTGAAGCCTGGGCTGCCGATCATCGCGGTGATATGTATACGCTTCTGCGCAGATGGTTCGAACTGGA AAGGCCGCTTTTGCTTCATTCCGATCTGGGAGCGGTTTTTAATGCGTTGAGCGCGGAGCAGGCGTCTTTGCTTGCTGATT CGCAGGTACGAGAAATCGTAAACACTCTGCAGGAAGCGGTATGCCGGCCGCCAATAGTCTACATGGCGGCGCGCGAGGAG GCGGGGTGCTGGTGGTACGCACGCTTGCATCTGGATAGGCTAATCCCCGAGGCTGTCACCGTGTCGGAATATCTCGCTTT CAAGGAGCTGCTGGTAAATCCGGAGGGGGCGAATGAGCCCGTGCTGGAAATTGATTTTGCGCCTTTTAATCGCGGTTCTC CAAAGCTCAAGGAAATCCGGTCCATAGGGCAGGGTGTGATTTTCCTCAACAAGCAACTTGCCGGAGGACTGTTTGGGCAA CTGGGGTTGGGGTCGGACAAGCTGCTGCATTTCCTGACAGTCCATTCCATGGACGGGAAGCAGTTGATGCTGGGCGGCAA TTTTGCCGATGTGCCGGCGCTGCGTTCCGGATTGCGCAGGGCTCTGAGCATGCTTGAGAAGTATCCCGACGATACCGAGT GGAAGGATGTTGCCGAACCCCTTGGAGGTATCGGTTTTGCACCCGGCTGGGGAAATTGCGTGGGCCGTGTGAGCGAGACG ATGAGTTTGCTGGTGGATATTCTGGAAGCCCCTTCTCCCCAGATCCTGGAGAGCTTCCTCGCCCGTATTCCGATGATCTC GAAACTGCTAATCCTGTCTCCCCATGGCTACTTCGGTCAGGATAACGTGTTGGGATTGCCGGACACGGGCGGTCAGGTGG TATACATCCTCGATCAGGTGCGGGCTCTGGAACGGGAAATGAGCGAGCGCCTGATATTGCAGGGAATAGATGCGGCGCCA AAAATCCTGATTGGCACGCGCCTCATTCCTGACGCGGGCGATACACTTTGCCACCAGCCCCTGGAAAAAATCCACGGTAC CCAGAATTCATGGATCGTGCGAGTGCCATTCCGAAAAGGGAGTGGTGAAATCGTTCGCCATTGGATTTCCCGGTTCGAGA TATGGCCATACCTGGAAAATTTTGCGCATGACATTGAACGCGAAGCTCTGGCCCAGCTCAGCGGTAGGCCCGACCTGATC ATAGGCAACTATTCCGATGGAAATCTTGTCGCCTCGCTGATTTCCAAACGGATTGGTGTAACCCAGTGCAATATTGCGCA TGCACTTGAGCAGAGCAAGTACCTGCACTCGGCGTTGTATTGGCGGGAGAACGAAGCCCAGTATCACTTCAACTGCCAAT ATACCGCCGATCTTATTGCGATGAACAGCGCTGATTTCATCATCACCAGCACCTTTCAGGAAATTGCCGGTACCGAGCAG ACGGTAGGCCAATATGAAACATACCAGAACTATACGATGCCCGGCTTATACCGGGTGGTGAACGGCATTGACCTTTTCGA TCCCAAGTTCAATATCGTTTCGCCGGGTGCGGATGCAGAAGTTTATTTTTCTTATCTCGATCACGAGCGGCGTCTGGACG CCCTGATTCCGGACATCGAGCGTCTCTTGTACGGGGATGATCCGGGCGTGCCCTGCCGGGGCTACTTCGCGGATCCTGCG AAACCTTTGATTTTTACAATGGCTCGCCTGGACACGGTGAAGAATCTTACCGGCCTCGCCGCGTGGTTCGGGCAGTGTGA GGCCTTATCGACTGCCGCCAACCTTCTGGTAATCGGCGGGCATATCGATCCAGCAGCCTCCTGTGATGGGGAGGAGCGTG CCGAGATCGAGCACATGCATGCCCTCATGAACGAGTACAAACTGGAGGGGCGCATGCGCTGGCTTGGCACCCGGCTGGAA AAGAATCTTGCCGGTGAGCTGTACCGGCACGTGGCGGACCGTCGCGGCATTTTTGTTCAGCCGGCGCGATTCGAGGCATT CGGGTTGACCATTATCGAGGCCATGGCCTCCGGTCTGCCTGTATTCGCCACCTGCTATGGCGGCCCGCGCGAAATCATTC AACATGGGGTTTCGGGCTATCATTTCGATCCCAACGATGGATTGGCGGGAGCTTCCGCCATGGCGGATTTTTTTGAGCGG GTGGCGGCCGATCCAGGTTTTTGGGACAGGATTTCGCAGAAAGCCTTGCAAAGGGTCGAAGCGCGCTATACCTGGCGACT CTATGCCGAGAGAATGATGACGCTATCACGTATTTACGGTTTCTGGAAGTTCGTCAGTAAACTGGAGCATGAAGAAACCG CGCGTTACCTCAACATGTTCTATCACTTGCAGTTTCGGCCGATGGCACAGGCGCTTCCCCAATAA
Upstream 100 bases:
>100_bases GGAAATGAGCAAATCTATTTTGCCCGGTCCGCATATGCCGATGGCATTGCAGAGGGCATGGCACATTATGAATTTGGTAC TTCCATCATGGAGACTGCAA
Downstream 100 bases:
>100_bases AGGGAGTCATGCTGTCGTTTTCAAGGAATAAGACCGGTTCCAATGTATACTGTGTCAATGCGAAAACCTTATTTGTTGTT CGGCGGTGCTTTCTCCGCTG
Product: sucrose synthase
Products: NDP; sucrose
Alternate protein names: Sucrose Synthase; Sucrose Phosphate Synthase; HAD-Superfamily Hydrolase Subfamily IIB; HAD Family Hydrolase; Glycosyl Transferase Group 1 Family Protein; Glycosyltransferase; Sucrose-Phosphate Synthase Glycosyltransferase Region; Sucrose-Phosphate Phosphatase; Sucrose-Phosphate Phosphatase Subfamily Protein; Ucrose-Phosphate Synthase. Sucrose-Phosphate Phosphatase; Glycosyl Transferase; Sucrose-Phosphate Synthase Glycosyltransferase Domain; Glycosyltransferase Of Family Sucrose-Phosphate Synthase
Number of amino acids: Translated: 794; Mature: 794
Protein sequence:
>794_residues MLHKFEAWAADHRGDMYTLLRRWFELERPLLLHSDLGAVFNALSAEQASLLADSQVREIVNTLQEAVCRPPIVYMAAREE AGCWWYARLHLDRLIPEAVTVSEYLAFKELLVNPEGANEPVLEIDFAPFNRGSPKLKEIRSIGQGVIFLNKQLAGGLFGQ LGLGSDKLLHFLTVHSMDGKQLMLGGNFADVPALRSGLRRALSMLEKYPDDTEWKDVAEPLGGIGFAPGWGNCVGRVSET MSLLVDILEAPSPQILESFLARIPMISKLLILSPHGYFGQDNVLGLPDTGGQVVYILDQVRALEREMSERLILQGIDAAP KILIGTRLIPDAGDTLCHQPLEKIHGTQNSWIVRVPFRKGSGEIVRHWISRFEIWPYLENFAHDIEREALAQLSGRPDLI IGNYSDGNLVASLISKRIGVTQCNIAHALEQSKYLHSALYWRENEAQYHFNCQYTADLIAMNSADFIITSTFQEIAGTEQ TVGQYETYQNYTMPGLYRVVNGIDLFDPKFNIVSPGADAEVYFSYLDHERRLDALIPDIERLLYGDDPGVPCRGYFADPA KPLIFTMARLDTVKNLTGLAAWFGQCEALSTAANLLVIGGHIDPAASCDGEERAEIEHMHALMNEYKLEGRMRWLGTRLE KNLAGELYRHVADRRGIFVQPARFEAFGLTIIEAMASGLPVFATCYGGPREIIQHGVSGYHFDPNDGLAGASAMADFFER VAADPGFWDRISQKALQRVEARYTWRLYAERMMTLSRIYGFWKFVSKLEHEETARYLNMFYHLQFRPMAQALPQ
Sequences:
>Translated_794_residues MLHKFEAWAADHRGDMYTLLRRWFELERPLLLHSDLGAVFNALSAEQASLLADSQVREIVNTLQEAVCRPPIVYMAAREE AGCWWYARLHLDRLIPEAVTVSEYLAFKELLVNPEGANEPVLEIDFAPFNRGSPKLKEIRSIGQGVIFLNKQLAGGLFGQ LGLGSDKLLHFLTVHSMDGKQLMLGGNFADVPALRSGLRRALSMLEKYPDDTEWKDVAEPLGGIGFAPGWGNCVGRVSET MSLLVDILEAPSPQILESFLARIPMISKLLILSPHGYFGQDNVLGLPDTGGQVVYILDQVRALEREMSERLILQGIDAAP KILIGTRLIPDAGDTLCHQPLEKIHGTQNSWIVRVPFRKGSGEIVRHWISRFEIWPYLENFAHDIEREALAQLSGRPDLI IGNYSDGNLVASLISKRIGVTQCNIAHALEQSKYLHSALYWRENEAQYHFNCQYTADLIAMNSADFIITSTFQEIAGTEQ TVGQYETYQNYTMPGLYRVVNGIDLFDPKFNIVSPGADAEVYFSYLDHERRLDALIPDIERLLYGDDPGVPCRGYFADPA KPLIFTMARLDTVKNLTGLAAWFGQCEALSTAANLLVIGGHIDPAASCDGEERAEIEHMHALMNEYKLEGRMRWLGTRLE KNLAGELYRHVADRRGIFVQPARFEAFGLTIIEAMASGLPVFATCYGGPREIIQHGVSGYHFDPNDGLAGASAMADFFER VAADPGFWDRISQKALQRVEARYTWRLYAERMMTLSRIYGFWKFVSKLEHEETARYLNMFYHLQFRPMAQALPQ >Mature_794_residues MLHKFEAWAADHRGDMYTLLRRWFELERPLLLHSDLGAVFNALSAEQASLLADSQVREIVNTLQEAVCRPPIVYMAAREE AGCWWYARLHLDRLIPEAVTVSEYLAFKELLVNPEGANEPVLEIDFAPFNRGSPKLKEIRSIGQGVIFLNKQLAGGLFGQ LGLGSDKLLHFLTVHSMDGKQLMLGGNFADVPALRSGLRRALSMLEKYPDDTEWKDVAEPLGGIGFAPGWGNCVGRVSET MSLLVDILEAPSPQILESFLARIPMISKLLILSPHGYFGQDNVLGLPDTGGQVVYILDQVRALEREMSERLILQGIDAAP KILIGTRLIPDAGDTLCHQPLEKIHGTQNSWIVRVPFRKGSGEIVRHWISRFEIWPYLENFAHDIEREALAQLSGRPDLI IGNYSDGNLVASLISKRIGVTQCNIAHALEQSKYLHSALYWRENEAQYHFNCQYTADLIAMNSADFIITSTFQEIAGTEQ TVGQYETYQNYTMPGLYRVVNGIDLFDPKFNIVSPGADAEVYFSYLDHERRLDALIPDIERLLYGDDPGVPCRGYFADPA KPLIFTMARLDTVKNLTGLAAWFGQCEALSTAANLLVIGGHIDPAASCDGEERAEIEHMHALMNEYKLEGRMRWLGTRLE KNLAGELYRHVADRRGIFVQPARFEAFGLTIIEAMASGLPVFATCYGGPREIIQHGVSGYHFDPNDGLAGASAMADFFER VAADPGFWDRISQKALQRVEARYTWRLYAERMMTLSRIYGFWKFVSKLEHEETARYLNMFYHLQFRPMAQALPQ
Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.4.1.13
Molecular weight: Translated: 89326; Mature: 89326
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHKFEAWAADHRGDMYTLLRRWFELERPLLLHSDLGAVFNALSAEQASLLADSQVREIV CCCCCCHHHCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH NTLQEAVCRPPIVYMAAREEAGCWWYARLHLDRLIPEAVTVSEYLAFKELLVNPEGANEP HHHHHHHCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VLEIDFAPFNRGSPKLKEIRSIGQGVIFLNKQLAGGLFGQLGLGSDKLLHFLTVHSMDGK EEEEECCCCCCCCHHHHHHHHHCCCEEEECHHHHCCHHHCCCCCHHHHHHHHHEECCCCC QLMLGGNFADVPALRSGLRRALSMLEKYPDDTEWKDVAEPLGGIGFAPGWGNCVGRVSET EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHH MSLLVDILEAPSPQILESFLARIPMISKLLILSPHGYFGQDNVLGLPDTGGQVVYILDQV HHHHHHHHHCCCHHHHHHHHHHCHHHHHHHEECCCCCCCCCCEECCCCCCCCEEEHHHHH RALEREMSERLILQGIDAAPKILIGTRLIPDAGDTLCHQPLEKIHGTQNSWIVRVPFRKG HHHHHHHHHHHHHHCCCCCCCEEEECEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCC SGEIVRHWISRFEIWPYLENFAHDIEREALAQLSGRPDLIIGNYSDGNLVASLISKRIGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCC TQCNIAHALEQSKYLHSALYWRENEAQYHFNCQYTADLIAMNSADFIITSTFQEIAGTEQ CHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEEEEEECCCCEEEEHHHHHHCCCHH TVGQYETYQNYTMPGLYRVVNGIDLFDPKFNIVSPGADAEVYFSYLDHERRLDALIPDIE HHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHH RLLYGDDPGVPCRGYFADPAKPLIFTMARLDTVKNLTGLAAWFGQCEALSTAANLLVIGG HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC HIDPAASCDGEERAEIEHMHALMNEYKLEGRMRWLGTRLEKNLAGELYRHVADRRGIFVQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE PARFEAFGLTIIEAMASGLPVFATCYGGPREIIQHGVSGYHFDPNDGLAGASAMADFFER CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH VAADPGFWDRISQKALQRVEARYTWRLYAERMMTLSRIYGFWKFVSKLEHEETARYLNMF HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YHLQFRPMAQALPQ HHEEECHHHHCCCC >Mature Secondary Structure MLHKFEAWAADHRGDMYTLLRRWFELERPLLLHSDLGAVFNALSAEQASLLADSQVREIV CCCCCCHHHCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH NTLQEAVCRPPIVYMAAREEAGCWWYARLHLDRLIPEAVTVSEYLAFKELLVNPEGANEP HHHHHHHCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VLEIDFAPFNRGSPKLKEIRSIGQGVIFLNKQLAGGLFGQLGLGSDKLLHFLTVHSMDGK EEEEECCCCCCCCHHHHHHHHHCCCEEEECHHHHCCHHHCCCCCHHHHHHHHHEECCCCC QLMLGGNFADVPALRSGLRRALSMLEKYPDDTEWKDVAEPLGGIGFAPGWGNCVGRVSET EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHH MSLLVDILEAPSPQILESFLARIPMISKLLILSPHGYFGQDNVLGLPDTGGQVVYILDQV HHHHHHHHHCCCHHHHHHHHHHCHHHHHHHEECCCCCCCCCCEECCCCCCCCEEEHHHHH RALEREMSERLILQGIDAAPKILIGTRLIPDAGDTLCHQPLEKIHGTQNSWIVRVPFRKG HHHHHHHHHHHHHHCCCCCCCEEEECEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCC SGEIVRHWISRFEIWPYLENFAHDIEREALAQLSGRPDLIIGNYSDGNLVASLISKRIGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCC TQCNIAHALEQSKYLHSALYWRENEAQYHFNCQYTADLIAMNSADFIITSTFQEIAGTEQ CHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEEEEEECCCCEEEEHHHHHHCCCHH TVGQYETYQNYTMPGLYRVVNGIDLFDPKFNIVSPGADAEVYFSYLDHERRLDALIPDIE HHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHH RLLYGDDPGVPCRGYFADPAKPLIFTMARLDTVKNLTGLAAWFGQCEALSTAANLLVIGG HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC HIDPAASCDGEERAEIEHMHALMNEYKLEGRMRWLGTRLEKNLAGELYRHVADRRGIFVQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE PARFEAFGLTIIEAMASGLPVFATCYGGPREIIQHGVSGYHFDPNDGLAGASAMADFFER CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH VAADPGFWDRISQKALQRVEARYTWRLYAERMMTLSRIYGFWKFVSKLEHEETARYLNMF HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YHLQFRPMAQALPQ HHEEECHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NDP-glucose; D-fructose
Specific reaction: NDP-glucose + D-fructose = NDP + sucrose
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA