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The map label for this gene is ompA [H]

Identifier: 82703306

GI number: 82703306

Start: 2484373

End: 2485050

Strand: Reverse

Name: ompA [H]

Synonym: Nmul_A2188

Alternate gene names: 82703306

Gene position: 2485050-2484373 (Counterclockwise)

Preceding gene: 82703314

Following gene: 82703305

Centisome position: 78.04

GC content: 53.83

Gene sequence:

>678_bases
ATGAAAAATACAGTAACGAAAAAACTCTTGCTTGGAGCAGCTGTTTTGCCAGTGCTGTTTTCAGGCGTCGCTATGGCTCA
GGAGATACCTGAGGCCTACGCGGTCGATAGCGTTGGCGAAGTAGTCAGAGATTCTTCCGGAGACTGCTGGCGCACCGGTT
ATTGGACACCTGCAATGGCAACCTATGAGTGCGACCCTGATCTGCTGCCAAAACCCGAGAAAAAAGTCGAAGCCCCCGCT
CCAGAACCCACCCCTGCCCCTGCTCCTGCTCCTGTTTATACCGAGCCTGAGAAAATCTCGCTCTCCGCCGATCAACTGTT
CGATTTCGACAAGGCCAACCTGAGGCCAGAAGGCAAACAGACCCTGGATGATCTTGTGGCCAAGCTTGGTGGCGTCAAAT
ACGACACCATCGTTGCCATCGGTTATGCCGACCGTCTCGGCAGCGATGCCTATAACAAGAAACTTTCCATGCGCCGCGCC
GAATCCGTCAAGGCTTACCTGGTCAACGAAAAAGGCATCCCGGCTGATCGCATCTTCATCGACGGCAAAGGCGAAGCTAA
TCCTGTAACGGGCGATACCTGCAAGGGTAACAAGAAGACGAAGGCTCTGATCGCCTGTCTGCAACCCGACCGTCGCGTCG
AAGTTGAAGTCGCCGGTACGAAGGAAACAGTACAATAA

Upstream 100 bases:

>100_bases
GATGCGCGATGCCGCAATGAGGCGGCTTAGTCTTTTCATTTGCATGACTTACAGGGATGATCTGATCTTGAATCTTAGTT
TTTCTAAAAAGGGGCATAGC

Downstream 100 bases:

>100_bases
TTCGATCCATATATAAAAAACGCAAAAAAATCAAACCCTGCCATCGCGGCAGGGTTTTTTTTTGCTAAGCTTCCGCGATG
ATGGATCCGGTAAAAATCGA

Product: OmpA/MotB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKNTVTKKLLLGAAVLPVLFSGVAMAQEIPEAYAVDSVGEVVRDSSGDCWRTGYWTPAMATYECDPDLLPKPEKKVEAPA
PEPTPAPAPAPVYTEPEKISLSADQLFDFDKANLRPEGKQTLDDLVAKLGGVKYDTIVAIGYADRLGSDAYNKKLSMRRA
ESVKAYLVNEKGIPADRIFIDGKGEANPVTGDTCKGNKKTKALIACLQPDRRVEVEVAGTKETVQ

Sequences:

>Translated_225_residues
MKNTVTKKLLLGAAVLPVLFSGVAMAQEIPEAYAVDSVGEVVRDSSGDCWRTGYWTPAMATYECDPDLLPKPEKKVEAPA
PEPTPAPAPAPVYTEPEKISLSADQLFDFDKANLRPEGKQTLDDLVAKLGGVKYDTIVAIGYADRLGSDAYNKKLSMRRA
ESVKAYLVNEKGIPADRIFIDGKGEANPVTGDTCKGNKKTKALIACLQPDRRVEVEVAGTKETVQ
>Mature_225_residues
MKNTVTKKLLLGAAVLPVLFSGVAMAQEIPEAYAVDSVGEVVRDSSGDCWRTGYWTPAMATYECDPDLLPKPEKKVEAPA
PEPTPAPAPAPVYTEPEKISLSADQLFDFDKANLRPEGKQTLDDLVAKLGGVKYDTIVAIGYADRLGSDAYNKKLSMRRA
ESVKAYLVNEKGIPADRIFIDGKGEANPVTGDTCKGNKKTKALIACLQPDRRVEVEVAGTKETVQ

Specific function: Required for the action of colicins K and L and for the stabilization of mating aggregates in conjugation. Serves as a receptor for a number of T-even like phages. Also acts as a porin with low permeability that allows slow penetration of small solutes [H

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=132, Percent_Identity=53.030303030303, Blast_Score=139, Evalue=1e-34,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006664
- InterPro:   IPR002368
- InterPro:   IPR006690
- InterPro:   IPR000498
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA; PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 24300; Mature: 24300

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTVTKKLLLGAAVLPVLFSGVAMAQEIPEAYAVDSVGEVVRDSSGDCWRTGYWTPAMA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCE
TYECDPDLLPKPEKKVEAPAPEPTPAPAPAPVYTEPEKISLSADQLFDFDKANLRPEGKQ
EEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHCCCCCCCCCCHHH
TLDDLVAKLGGVKYDTIVAIGYADRLGSDAYNKKLSMRRAESVKAYLVNEKGIPADRIFI
HHHHHHHHHCCCCCCEEEEEECHHHHCCHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEE
DGKGEANPVTGDTCKGNKKTKALIACLQPDRRVEVEVAGTKETVQ
CCCCCCCCCCCCCCCCCCHHEEEEEECCCCCEEEEEECCCHHCCC
>Mature Secondary Structure
MKNTVTKKLLLGAAVLPVLFSGVAMAQEIPEAYAVDSVGEVVRDSSGDCWRTGYWTPAMA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCE
TYECDPDLLPKPEKKVEAPAPEPTPAPAPAPVYTEPEKISLSADQLFDFDKANLRPEGKQ
EEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHCCCCCCCCCCHHH
TLDDLVAKLGGVKYDTIVAIGYADRLGSDAYNKKLSMRRAESVKAYLVNEKGIPADRIFI
HHHHHHHHHCCCCCCEEEEEECHHHHCCHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEE
DGKGEANPVTGDTCKGNKKTKALIACLQPDRRVEVEVAGTKETVQ
CCCCCCCCCCCCCCCCCCHHEEEEEECCCCCEEEEEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]