Definition Nitrosospira multiformis ATCC 25196 chromosome, complete genome.
Accession NC_007614
Length 3,184,243

Click here to switch to the map view.

The map label for this gene is ypwA [H]

Identifier: 82703289

GI number: 82703289

Start: 2464133

End: 2465632

Strand: Direct

Name: ypwA [H]

Synonym: Nmul_A2170

Alternate gene names: 82703289

Gene position: 2464133-2465632 (Clockwise)

Preceding gene: 82703288

Following gene: 82703290

Centisome position: 77.39

GC content: 55.4

Gene sequence:

>1500_bases
ATGTATCCAGCCCTCCAGTCTTTGAAGGCCCGGTTTGCAGAAATCGATGACCTCAGGCGGGCCGTTTCCGTGCTCCATTG
GGATATGTCCACTTACATGCCTCAGGACGGAACAGCCTCCCGGGGCCGCATGATAGCCACCGTCGAAAAGGCGGCTCACG
AAAAACTCATCGACCCCGCTCTGGCCGGGCTTCTGGAGGAAACAGGGGCATTGCCCGATGCAATGCTGTCTGCAGACGAG
CGAGCGTTCCTGCGCCTGGCCCGCCGGCAGTTTGTCCGCGCGTCAAAAATCCCTTCCGGTTTCAAGGCCGAATTTTTCCA
GCACATGGCCGAGACCTACGAAGTTTGGGTTCAGGCACGAAAATTGAACGATTTCAAGGTCGTGGCGCCCTTTCTGGAAA
AAACCGTCGCATACTCACGAGCCCTGTCGGATTTCTTCAATGCCGGGGAAACCGCGTGGACGCACCCGATGGATCCGCAC
ATCGAAGACGCTGACCCTGGCATGACCACGACAGATCTCAAGACGCTTTTTGCCGACCTTCGACGTGATCTCGTACCATT
GGTCCGGGAGCTGTCGTCTCGAAGCAAGCCACGAACCGATTTTTTGTCACGGGCCTGCCCCAAGTCCCGCCAAGTGGAGT
TTTTGAACTGGCTTGCCAGGAATATCGGTTATGACTTCAATCGGGGGCGGCAGGACCTCACTCACCACCCGTTCATGACA
AAGCTGGGCGCGGGGGATGTTCGCATCACCACCCGAATCAATGAGACGAACCTCTGTGATGGTATTTTCAGCACCATTCA
TGAGTGCGGGCATGCCTTTTACGAACTGGGGCTTTCCCCAAGCCAGGATGGAACTATCCTGGGTCACGGCACTTCCGCCG
GAATTCACGAAAGCCAAAGCCGGCTGTGGGAAAACCAGGTTGGCCGCTCCCGGGAATTCTGGACATATTTTTATCCCCAC
CTGCAGGCCCACTTTTCAGAGGCTCTTGGGGATGTTTCGCTGGAAGAATTCTATTGCGGCATCAATCGCGTGGAACCATC
GTTGATTCGAACCGAGGCCGATGAAGTGACCTACAACCTCCATGTCATGATCCGCTTCGACATCGAATCGCAGCTTCTGG
ATGGCTCACTCCAAGTGAAGGATCTGCCAGGGGCTTGGAACGACCGGTATGAAGCTGACCTTGGCGTACGTCCGTCGTCC
GATGCTCAAGGCTGCCTTCAGGATGTGCATTGGTATTACGGAGGCGTCGGCGGAATGTTCCAAGGCTATACGATTGGAAA
TCTCTTTAGCGCCCAGTGCTTCGAGGCCGCTCTTGAGGCCCATCCGGAAATTCCGGAGGCGATGATACAGGGAAATTTCA
GCACCCTTCATTCGTGGCTGAAGGAAAACATTTATCAGTACGGCTCGGGTCTTTTTCCCCAAGAACTGATCCACCGCGTG
ACCGGTCACGACTTATCGTCGAAACCCTTCGTTGCGTACCTGAAGCGGAAATACCTGTAG

Upstream 100 bases:

>100_bases
CACCGATTGCGCCTTTAACCATTTCCATGTAATTTCATTTCCATGAAAAAAAGCTTTTATTTTTCCTGAGCGCTTCTCAC
TTAGAAAGGACAATGCTGCC

Downstream 100 bases:

>100_bases
ACACTTCCGCCCGACACGAACGCCTGGCCACCGGGCCGCTATGACTTGAACAGGCGGCGGGCATGGTTGATGAAGCAATC
GCCCTGCCCGCGCAGCTTGA

Product: thermostable carboxypeptidase 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MYPALQSLKARFAEIDDLRRAVSVLHWDMSTYMPQDGTASRGRMIATVEKAAHEKLIDPALAGLLEETGALPDAMLSADE
RAFLRLARRQFVRASKIPSGFKAEFFQHMAETYEVWVQARKLNDFKVVAPFLEKTVAYSRALSDFFNAGETAWTHPMDPH
IEDADPGMTTTDLKTLFADLRRDLVPLVRELSSRSKPRTDFLSRACPKSRQVEFLNWLARNIGYDFNRGRQDLTHHPFMT
KLGAGDVRITTRINETNLCDGIFSTIHECGHAFYELGLSPSQDGTILGHGTSAGIHESQSRLWENQVGRSREFWTYFYPH
LQAHFSEALGDVSLEEFYCGINRVEPSLIRTEADEVTYNLHVMIRFDIESQLLDGSLQVKDLPGAWNDRYEADLGVRPSS
DAQGCLQDVHWYYGGVGGMFQGYTIGNLFSAQCFEAALEAHPEIPEAMIQGNFSTLHSWLKENIYQYGSGLFPQELIHRV
TGHDLSSKPFVAYLKRKYL

Sequences:

>Translated_499_residues
MYPALQSLKARFAEIDDLRRAVSVLHWDMSTYMPQDGTASRGRMIATVEKAAHEKLIDPALAGLLEETGALPDAMLSADE
RAFLRLARRQFVRASKIPSGFKAEFFQHMAETYEVWVQARKLNDFKVVAPFLEKTVAYSRALSDFFNAGETAWTHPMDPH
IEDADPGMTTTDLKTLFADLRRDLVPLVRELSSRSKPRTDFLSRACPKSRQVEFLNWLARNIGYDFNRGRQDLTHHPFMT
KLGAGDVRITTRINETNLCDGIFSTIHECGHAFYELGLSPSQDGTILGHGTSAGIHESQSRLWENQVGRSREFWTYFYPH
LQAHFSEALGDVSLEEFYCGINRVEPSLIRTEADEVTYNLHVMIRFDIESQLLDGSLQVKDLPGAWNDRYEADLGVRPSS
DAQGCLQDVHWYYGGVGGMFQGYTIGNLFSAQCFEAALEAHPEIPEAMIQGNFSTLHSWLKENIYQYGSGLFPQELIHRV
TGHDLSSKPFVAYLKRKYL
>Mature_499_residues
MYPALQSLKARFAEIDDLRRAVSVLHWDMSTYMPQDGTASRGRMIATVEKAAHEKLIDPALAGLLEETGALPDAMLSADE
RAFLRLARRQFVRASKIPSGFKAEFFQHMAETYEVWVQARKLNDFKVVAPFLEKTVAYSRALSDFFNAGETAWTHPMDPH
IEDADPGMTTTDLKTLFADLRRDLVPLVRELSSRSKPRTDFLSRACPKSRQVEFLNWLARNIGYDFNRGRQDLTHHPFMT
KLGAGDVRITTRINETNLCDGIFSTIHECGHAFYELGLSPSQDGTILGHGTSAGIHESQSRLWENQVGRSREFWTYFYPH
LQAHFSEALGDVSLEEFYCGINRVEPSLIRTEADEVTYNLHVMIRFDIESQLLDGSLQVKDLPGAWNDRYEADLGVRPSS
DAQGCLQDVHWYYGGVGGMFQGYTIGNLFSAQCFEAALEAHPEIPEAMIQGNFSTLHSWLKENIYQYGSGLFPQELIHRV
TGHDLSSKPFVAYLKRKYL

Specific function: Unknown

COG id: COG2317

COG function: function code E; Zn-dependent carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001333 [H]

Pfam domain/function: PF02074 Peptidase_M32 [H]

EC number: NA

Molecular weight: Translated: 56565; Mature: 56565

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure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HCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]