Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
---|---|
Accession | NC_007614 |
Length | 3,184,243 |
Click here to switch to the map view.
The map label for this gene is 82703220
Identifier: 82703220
GI number: 82703220
Start: 2392833
End: 2393411
Strand: Direct
Name: 82703220
Synonym: Nmul_A2101
Alternate gene names: NA
Gene position: 2392833-2393411 (Clockwise)
Preceding gene: 82703219
Following gene: 82703221
Centisome position: 75.15
GC content: 49.91
Gene sequence:
>579_bases TTGACGGAACTTAAAGGAACGTATTCCAAGGAAGAAAATGTTTTCAAAGTATCCAAACCGCACACTGATGTAAAAATAAA GGTAGATAAATGGCCAATGCCGCCTTTCATGGGCTTGGGATCATGGGCTGGCTTTGCTCCTGCACAGGATGACCAGGTCG TAATGATGGGCGATACCGTGCTGTTCGAGGATGAGGTCAATCCTGCGATAAGCGCGGCTTTCGAGGCGGGGCTGGAAGTA ACTGGCTTGCACAATCATTTTTTCTTTGATGAACCCAAGGTGTATTTCATGCACATCGGTGGCAGGGGAAGCGCTGCTGA ACTTTCGGCCGGGGTAAAGAAGATTTATGACAAGGTCGCTGAAATCCGCGCTGTCCAGCCTGTTCCCTCTTCACGGTTTC CCAAGACAATCCCGCAGGAGAACAAGATTTCCCCTCAGCCTTTGGAACAAATCCTTGGAATGAAAGGAAGCTCAAAAGAT GGCATGTTTAAAGTTGTCATCGGGCGCCCCGCCACTATGGGCGTCGGTGGGAAAAGAAATGGGTATAAACACATGGGCGG CCTTTGCGGGCAGCGATAG
Upstream 100 bases:
>100_bases ACCCAAAGGAGGAGAAAAAGGTATGGATCTCAGCTGAAGAATCCTCCTGGCCGAACGTCTCGCCAACGTTTGATCGACTA ATACAGCCGAAATCGAGCGA
Downstream 100 bases:
>100_bases CGAGGCAGTGGTGGATGGAGATTTCGTCATGCTCGCCGATGAAATGCAGCCTGTCTTGAGAACAATGCGAGAAGGTGGCA TCAATATTGTTGCGATTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein Lpqo; LysM Domain-Containing Protein; Lipoprotein
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MTELKGTYSKEENVFKVSKPHTDVKIKVDKWPMPPFMGLGSWAGFAPAQDDQVVMMGDTVLFEDEVNPAISAAFEAGLEV TGLHNHFFFDEPKVYFMHIGGRGSAAELSAGVKKIYDKVAEIRAVQPVPSSRFPKTIPQENKISPQPLEQILGMKGSSKD GMFKVVIGRPATMGVGGKRNGYKHMGGLCGQR
Sequences:
>Translated_192_residues MTELKGTYSKEENVFKVSKPHTDVKIKVDKWPMPPFMGLGSWAGFAPAQDDQVVMMGDTVLFEDEVNPAISAAFEAGLEV TGLHNHFFFDEPKVYFMHIGGRGSAAELSAGVKKIYDKVAEIRAVQPVPSSRFPKTIPQENKISPQPLEQILGMKGSSKD GMFKVVIGRPATMGVGGKRNGYKHMGGLCGQR >Mature_191_residues TELKGTYSKEENVFKVSKPHTDVKIKVDKWPMPPFMGLGSWAGFAPAQDDQVVMMGDTVLFEDEVNPAISAAFEAGLEVT GLHNHFFFDEPKVYFMHIGGRGSAAELSAGVKKIYDKVAEIRAVQPVPSSRFPKTIPQENKISPQPLEQILGMKGSSKDG MFKVVIGRPATMGVGGKRNGYKHMGGLCGQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20987; Mature: 20855
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELKGTYSKEENVFKVSKPHTDVKIKVDKWPMPPFMGLGSWAGFAPAQDDQVVMMGDTV CCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCEE LFEDEVNPAISAAFEAGLEVTGLHNHFFFDEPKVYFMHIGGRGSAAELSAGVKKIYDKVA EEECCCCHHHHHHHHCCCEEEECCCCEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH EIRAVQPVPSSRFPKTIPQENKISPQPLEQILGMKGSSKDGMFKVVIGRPATMGVGGKRN HHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEECCCCCCC GYKHMGGLCGQR CCHHHCCCCCCC >Mature Secondary Structure TELKGTYSKEENVFKVSKPHTDVKIKVDKWPMPPFMGLGSWAGFAPAQDDQVVMMGDTV CCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCEE LFEDEVNPAISAAFEAGLEVTGLHNHFFFDEPKVYFMHIGGRGSAAELSAGVKKIYDKVA EEECCCCHHHHHHHHCCCEEEECCCCEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH EIRAVQPVPSSRFPKTIPQENKISPQPLEQILGMKGSSKDGMFKVVIGRPATMGVGGKRN HHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEECCCCCCC GYKHMGGLCGQR CCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA