Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
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Accession | NC_007614 |
Length | 3,184,243 |
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The map label for this gene is 82703214
Identifier: 82703214
GI number: 82703214
Start: 2385995
End: 2386732
Strand: Direct
Name: 82703214
Synonym: Nmul_A2095
Alternate gene names: NA
Gene position: 2385995-2386732 (Clockwise)
Preceding gene: 82703213
Following gene: 82703218
Centisome position: 74.93
GC content: 52.57
Gene sequence:
>738_bases ATGAATCGACGAAAACTGCTGGGATTGCTCGGGATAGCCGGAATCGGCATGGCAGGACGGCATTCATCCCTCCATTCCGG GAATGAGGAGGTAGCCCGTAAAATGATTTCATGCGTGGTAACTCCCCAGCAAACGGAAGGTCCTTATTTCGTCGATGAAC GCCTGCACCGTTCAGATATTCGATCCGATCCTTCCGATGGCTCGGTAAAGGCTGGCCTTCCGCTTGCACTCGAACTGCGC ATTTTCACGGTGGGCAACGAGGGCATGGAAGGGTGCCTGCCGCTTGCCAATGCCATAGTCGACATCTGGCACTGCGATGC GCAGGGAATCTATTCCGATGTCGAGGACAGGAATTTCAATACAATGGGAAAGAAATTCCTGCGCGGCTACCAGTTAACGG ACAGGAACGGCAGCGTGCGTTTTATCACCATTTATCCAGGGTGGTATCCTGGCAGAACCGTTCATATTCATTTCAAGATA CGGACCGATCCCGGTTATGCGCGCGGCCGCGAATTTACATCGCAACTCTACTTCGATGATGCGATTACCGATAAGGTGCA CGCACAACCCCCTTATGCCGAACACGCCAGCAAGGGTTCATATCAGCAGAGAACCAGGAATGAAGATGACAGCATTTATC TCAAGGGTGGAAGGCAACTGATGCTCAAGCTTGCCGGAGCAGAGACAGGCTATGCGACTGCATTCGACGTGGGGCTGGAA GCGGAAAAAAGAGATTGA
Upstream 100 bases:
>100_bases TCCACAGGAACTTCAAAAGCGGTCAAGCCCTCCAAGGCTCAGGGTGACCCAATCGCATATAGTCGCCGTCACATCGAGGA ATACAAAATGGGGAGCGGGC
Downstream 100 bases:
>100_bases AGGTCGGATGGGTCAGGATCCTATACCCTTGTTGGAAAGGGGAGCCTACGCTCAGATGTAGTAGTCGCGATCCCATCAGA CAGTTTCCCGATTTGACTGG
Product: intradiol ring-cleavage dioxygenase
Products: NA
Alternate protein names: Dioxygenase; Protocatechuate Dioxygenase; Twin-Arginine Translocation Pathway Signal; Protocatechuate 3 4-Dioxygenase Beta Chain; Protocatechuate 3 4-Dioxygenase; Catechol 1 2-Dioxygenase; Dioxygenase Subfamily Protein; Protocatechuate 3 4-Dioxygenase Beta Subunit Like Protein; Protocatechuate 3,4-Dioxygenase Protein Beta Chain; Intradiol-Dioxygenase-Like Protein; Protocatechuate 3 4-Dioxygenase Beta Subunit; Protocatechuate 3 4-Dioxygenase Subunit Beta-Like Protein; Protocatechuate 3 4-Dioxygenase Subunit Beta; Ring-Cleaving Dioxygenase Protein; Intradiol Dioxygenase
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MNRRKLLGLLGIAGIGMAGRHSSLHSGNEEVARKMISCVVTPQQTEGPYFVDERLHRSDIRSDPSDGSVKAGLPLALELR IFTVGNEGMEGCLPLANAIVDIWHCDAQGIYSDVEDRNFNTMGKKFLRGYQLTDRNGSVRFITIYPGWYPGRTVHIHFKI RTDPGYARGREFTSQLYFDDAITDKVHAQPPYAEHASKGSYQQRTRNEDDSIYLKGGRQLMLKLAGAETGYATAFDVGLE AEKRD
Sequences:
>Translated_245_residues MNRRKLLGLLGIAGIGMAGRHSSLHSGNEEVARKMISCVVTPQQTEGPYFVDERLHRSDIRSDPSDGSVKAGLPLALELR IFTVGNEGMEGCLPLANAIVDIWHCDAQGIYSDVEDRNFNTMGKKFLRGYQLTDRNGSVRFITIYPGWYPGRTVHIHFKI RTDPGYARGREFTSQLYFDDAITDKVHAQPPYAEHASKGSYQQRTRNEDDSIYLKGGRQLMLKLAGAETGYATAFDVGLE AEKRD >Mature_245_residues MNRRKLLGLLGIAGIGMAGRHSSLHSGNEEVARKMISCVVTPQQTEGPYFVDERLHRSDIRSDPSDGSVKAGLPLALELR IFTVGNEGMEGCLPLANAIVDIWHCDAQGIYSDVEDRNFNTMGKKFLRGYQLTDRNGSVRFITIYPGWYPGRTVHIHFKI RTDPGYARGREFTSQLYFDDAITDKVHAQPPYAEHASKGSYQQRTRNEDDSIYLKGGRQLMLKLAGAETGYATAFDVGLE AEKRD
Specific function: Unknown
COG id: COG3485
COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27372; Mature: 27372
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRKLLGLLGIAGIGMAGRHSSLHSGNEEVARKMISCVVTPQQTEGPYFVDERLHRSDI CCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC RSDPSDGSVKAGLPLALELRIFTVGNEGMEGCLPLANAIVDIWHCDAQGIYSDVEDRNFN CCCCCCCCEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCH TMGKKFLRGYQLTDRNGSVRFITIYPGWYPGRTVHIHFKIRTDPGYARGREFTSQLYFDD HHHHHHHCCEEEECCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHEECC AITDKVHAQPPYAEHASKGSYQQRTRNEDDSIYLKGGRQLMLKLAGAETGYATAFDVGLE HHCCCCCCCCCCHHHCCCCCHHHHHCCCCCEEEEECCCEEEEEEECCCCCCEEEEECCCC AEKRD CCCCC >Mature Secondary Structure MNRRKLLGLLGIAGIGMAGRHSSLHSGNEEVARKMISCVVTPQQTEGPYFVDERLHRSDI CCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC RSDPSDGSVKAGLPLALELRIFTVGNEGMEGCLPLANAIVDIWHCDAQGIYSDVEDRNFN CCCCCCCCEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCH TMGKKFLRGYQLTDRNGSVRFITIYPGWYPGRTVHIHFKIRTDPGYARGREFTSQLYFDD HHHHHHHCCEEEECCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHEECC AITDKVHAQPPYAEHASKGSYQQRTRNEDDSIYLKGGRQLMLKLAGAETGYATAFDVGLE HHCCCCCCCCCCHHHCCCCCHHHHHCCCCCEEEEECCCEEEEEEECCCCCCEEEEECCCC AEKRD CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA