Click here to switch to the map view.

The map label for this gene is insC1 [C]

Identifier: 82703146

GI number: 82703146

Start: 2320904

End: 2321311

Strand: Reverse

Name: insC1 [C]

Synonym: Nmul_A2025

Alternate gene names: 82703146

Gene position: 2321311-2320904 (Counterclockwise)

Preceding gene: 82703148

Following gene: 82703145

Centisome position: 72.9

GC content: 53.92

Gene sequence:

>408_bases
ATGCCTGGTGCTATGCATAGTGCTTCAGGTTTGGATCGTATTGAAGTAGTAACCGGGGTTGAGCGCCGCAGGCGCTGGAC
CCTGGGTGAGAAATTAAAAGCTGTTGAGGAATCCCGCTTGCCGGGCATGAGTGTCTCGTATGTGGCGCGAAAATATGGTA
TTGCTCCGAGCTTGTTATTTCGCTGGAGGAAGCTTATGGCTGAGGGCGGACAAGAAGCAGTGCGTAGTGGTGATGCGGTA
GTGTCTGCGGCCGAGGTGAAAGAGTTGAAGAAGCGGATCCGGGAGTTGGAGCGGGTTCTGGGCAAGAAAACCCTGGAGAA
CGAGATTCTCACGGAAGCGGTGAAGCTTGCGCATGAAAAAAAACTGATCTCGCGCATGCCCTTGCTGCCACCGGACGATT
TGCCATGA

Upstream 100 bases:

>100_bases
TATTCAAAGATTGTTACTATGGGACGATGTCGCAATTTACTTTTTGTAGTAGCCCCCAATTGAACCGGACACAGATGCAC
TGATGACAGGAGATAGGCAT

Downstream 100 bases:

>100_bases
AGGCCATTGCAGACACCATGGGTGTGGCGCGCTCCCGTCTTGTGGAACGGATGAAGCCGCAGGAAAAGTCTTTTCGTTGC
CGCTACAACAAGGCTGATGA

Product: transposase IS3/IS911

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MPGAMHSASGLDRIEVVTGVERRRRWTLGEKLKAVEESRLPGMSVSYVARKYGIAPSLLFRWRKLMAEGGQEAVRSGDAV
VSAAEVKELKKRIRELERVLGKKTLENEILTEAVKLAHEKKLISRMPLLPPDDLP

Sequences:

>Translated_135_residues
MPGAMHSASGLDRIEVVTGVERRRRWTLGEKLKAVEESRLPGMSVSYVARKYGIAPSLLFRWRKLMAEGGQEAVRSGDAV
VSAAEVKELKKRIRELERVLGKKTLENEILTEAVKLAHEKKLISRMPLLPPDDLP
>Mature_134_residues
PGAMHSASGLDRIEVVTGVERRRRWTLGEKLKAVEESRLPGMSVSYVARKYGIAPSLLFRWRKLMAEGGQEAVRSGDAVV
SAAEVKELKKRIRELERVLGKKTLENEILTEAVKLAHEKKLISRMPLLPPDDLP

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI145693215, Length=116, Percent_Identity=52.5862068965517, Blast_Score=114, Evalue=3e-27,
Organism=Escherichia coli, GI145693180, Length=116, Percent_Identity=52.5862068965517, Blast_Score=114, Evalue=3e-27,
Organism=Escherichia coli, GI145693177, Length=116, Percent_Identity=52.5862068965517, Blast_Score=114, Evalue=3e-27,
Organism=Escherichia coli, GI145693154, Length=116, Percent_Identity=52.5862068965517, Blast_Score=114, Evalue=3e-27,
Organism=Escherichia coli, GI145693126, Length=116, Percent_Identity=52.5862068965517, Blast_Score=114, Evalue=3e-27,
Organism=Escherichia coli, GI145693097, Length=116, Percent_Identity=52.5862068965517, Blast_Score=114, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 15129; Mature: 14998

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGAMHSASGLDRIEVVTGVERRRRWTLGEKLKAVEESRLPGMSVSYVARKYGIAPSLLF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHH
RWRKLMAEGGQEAVRSGDAVVSAAEVKELKKRIRELERVLGKKTLENEILTEAVKLAHEK
HHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLISRMPLLPPDDLP
HHHHHCCCCCCCCCC
>Mature Secondary Structure 
PGAMHSASGLDRIEVVTGVERRRRWTLGEKLKAVEESRLPGMSVSYVARKYGIAPSLLF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHH
RWRKLMAEGGQEAVRSGDAVVSAAEVKELKKRIRELERVLGKKTLENEILTEAVKLAHEK
HHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLISRMPLLPPDDLP
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA